CB417347

Overview
NameCB417347
Unique NameCB417347
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length628
Libraries
Library NameType
Mature peel (flavedo) cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HSP90_CANAL (Heat shock protein 90 homolog OS=Candida albicans GN=HSP90 PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 5.923e-55
Identity = 107/179 (59.78%), Postives = 139/179 (77.65%), Query Frame = 2
Query:   83 EKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDE 619
            E  EF AE+S+LM +IIN++Y NK+IFLRELISNASDALDKIR+ +L+D   L      +L I+I   K++K+L IRD GIGMTK DL+ NLGTIAKSGT +F+E +    D ++IGQFGVGFYS++LVAD+V+VISKHNDD+QYVWES A G F ++ D  NE LGRGT ++L L+++
Sbjct:    7 ETHEFTAEISQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQALSDPSQLES--EPELFIRIIPQKDQKVLEIRDSGIGMTKADLVNNLGTIAKSGTKSFMEALSAGADVSMIGQFGVGFYSLFLVADHVQVISKHNDDEQYVWESNAGGKFTVTLDETNERLGRGTMLRLFLKED 183          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HSP82_YEAST (ATP-dependent molecular chaperone HSP82 OS=Saccharomyces cerevisiae GN=HSP82 PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 5.923e-55
Identity = 110/181 (60.77%), Postives = 143/181 (79.01%), Query Frame = 2
Query:   80 AEKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTD-KEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDE 619
            +E FEFQAE+++LM +IIN++Y NK+IFLRELISNASDALDKIR+ SL+D K++  E D   L I+I    E+K+L IRD GIGMTK +LI NLGTIAKSGT AF+E +    D ++IGQFGVGFYS++LVAD V+VISK NDD+QY+WES A G+F ++ D  NE +GRGT ++L L+D+
Sbjct:    3 SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPD---LFIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDD 180          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HS90A_RAT (Heat shock protein HSP 90-alpha OS=Rattus norvegicus GN=Hsp90aa1 PE=1 SV=3)

HSP 1 Score: 213.772 bits (543), Expect = 5.923e-55
Identity = 109/182 (59.89%), Postives = 138/182 (75.82%), Query Frame = 2
Query:   83 EKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            E F FQAE+++LM +IIN+ Y NK+IFLRELISN+SDALDKIR+ SLTD   L  G   +L I +  +K+ + L+I D GIGMTK DLI NLGTIAKSGT AF+E +Q   D ++IGQFGVGFYS YLVA+ V VI+KHNDD+QY WES A G+F +  DT  EP+GRGT++ LHL+++  E
Sbjct:   18 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGK--ELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTE 196          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HS90A_PIG (Heat shock protein HSP 90-alpha OS=Sus scrofa GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 213.772 bits (543), Expect = 5.923e-55
Identity = 109/182 (59.89%), Postives = 138/182 (75.82%), Query Frame = 2
Query:   83 EKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            E F FQAE+++LM +IIN+ Y NK+IFLRELISN+SDALDKIR+ SLTD   L  G   +L I +  +K+ + L+I D GIGMTK DLI NLGTIAKSGT AF+E +Q   D ++IGQFGVGFYS YLVA+ V VI+KHNDD+QY WES A G+F +  DT  EP+GRGT++ LHL+++  E
Sbjct:   18 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGK--ELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTE 196          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HS90A_MACFA (Heat shock protein HSP 90-alpha OS=Macaca fascicularis GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 213.772 bits (543), Expect = 5.923e-55
Identity = 109/182 (59.89%), Postives = 138/182 (75.82%), Query Frame = 2
Query:   83 EKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            E F FQAE+++LM +IIN+ Y NK+IFLRELISN+SDALDKIR+ SLTD   L  G   +L I +  +K+ + L+I D GIGMTK DLI NLGTIAKSGT AF+E +Q   D ++IGQFGVGFYS YLVA+ V VI+KHNDD+QY WES A G+F +  DT  EP+GRGT++ LHL+++  E
Sbjct:   18 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGK--ELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTE 196          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HS90A_HUMAN (Heat shock protein HSP 90-alpha OS=Homo sapiens GN=HSP90AA1 PE=1 SV=5)

HSP 1 Score: 213.772 bits (543), Expect = 5.923e-55
Identity = 109/182 (59.89%), Postives = 138/182 (75.82%), Query Frame = 2
Query:   83 EKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            E F FQAE+++LM +IIN+ Y NK+IFLRELISN+SDALDKIR+ SLTD   L  G   +L I +  +K+ + L+I D GIGMTK DLI NLGTIAKSGT AF+E +Q   D ++IGQFGVGFYS YLVA+ V VI+KHNDD+QY WES A G+F +  DT  EP+GRGT++ LHL+++  E
Sbjct:   18 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGK--ELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTE 196          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HS90A_HORSE (Heat shock protein HSP 90-alpha (Fragment) OS=Equus caballus GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 5.923e-55
Identity = 109/182 (59.89%), Postives = 138/182 (75.82%), Query Frame = 2
Query:   83 EKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            E F FQAE+++LM +IIN+ Y NK+IFLRELISN+SDALDKIR+ SLTD   L  G   +L I +  +K+ + L+I D GIGMTK DLI NLGTIAKSGT AF+E +Q   D ++IGQFGVGFYS YLVA+ V VI+KHNDD+QY WES A G+F +  DT  EP+GRGT++ LHL+++  E
Sbjct:    7 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGK--ELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTE 185          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HS90A_BOVIN (Heat shock protein HSP 90-alpha OS=Bos taurus GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 213.772 bits (543), Expect = 5.923e-55
Identity = 109/182 (59.89%), Postives = 138/182 (75.82%), Query Frame = 2
Query:   83 EKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            E F FQAE+++LM +IIN+ Y NK+IFLRELISN+SDALDKIR+ SLTD   L  G   +L I +  +K+ + L+I D GIGMTK DLI NLGTIAKSGT AF+E +Q   D ++IGQFGVGFYS YLVA+ V VI+KHNDD+QY WES A G+F +  DT  EP+GRGT++ LHL+++  E
Sbjct:   18 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGK--ELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTE 196          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HS90A_MOUSE (Heat shock protein HSP 90-alpha OS=Mus musculus GN=Hsp90aa1 PE=1 SV=4)

HSP 1 Score: 213.386 bits (542), Expect = 7.736e-55
Identity = 109/182 (59.89%), Postives = 137/182 (75.27%), Query Frame = 2
Query:   83 EKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            E F FQAE+++LM +IIN+ Y NK+IFLRELISN+SDALDKIR+ SLTD   L  G   +L I +   K+ + L+I D GIGMTK DLI NLGTIAKSGT AF+E +Q   D ++IGQFGVGFYS YLVA+ V VI+KHNDD+QY WES A G+F +  DT  EP+GRGT++ LHL+++  E
Sbjct:   18 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGK--ELHINLIPSKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTE 196          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HS90A_CRIGR (Heat shock protein HSP 90-alpha OS=Cricetulus griseus GN=HSP90AA1 PE=2 SV=2)

HSP 1 Score: 213.386 bits (542), Expect = 7.736e-55
Identity = 109/182 (59.89%), Postives = 138/182 (75.82%), Query Frame = 2
Query:   83 EKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            E F FQAE+++LM +IIN+ Y NK+IFLRELISN+SDALDKIR+ SLTD   L  G   +L I I  +K+ + L+I D GIGMTK DLI NLGTIAKSGT AF+E +Q   D ++IGQFGVGFY+ YLVA+ V VI+KHNDD+QY WES A G+F +  DT  EP+GRGT++ LHL+++  E
Sbjct:   18 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGK--ELHINIIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYTAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTE 196          
The following BLAST results are available for this feature:
BLAST of CB417347 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
HSP90_CANAL5.923e-5559.78Heat shock protein 90 homolog OS=Candida albicans ... [more]
HSP82_YEAST5.923e-5560.77ATP-dependent molecular chaperone HSP82 OS=Sacchar... [more]
HS90A_RAT5.923e-5559.89Heat shock protein HSP 90-alpha OS=Rattus norvegic... [more]
HS90A_PIG5.923e-5559.89Heat shock protein HSP 90-alpha OS=Sus scrofa GN=H... [more]
HS90A_MACFA5.923e-5559.89Heat shock protein HSP 90-alpha OS=Macaca fascicul... [more]
HS90A_HUMAN5.923e-5559.89Heat shock protein HSP 90-alpha OS=Homo sapiens GN... [more]
HS90A_HORSE5.923e-5559.89Heat shock protein HSP 90-alpha (Fragment) OS=Equu... [more]
HS90A_BOVIN5.923e-5559.89Heat shock protein HSP 90-alpha OS=Bos taurus GN=H... [more]
HS90A_MOUSE7.736e-5559.89Heat shock protein HSP 90-alpha OS=Mus musculus GN... [more]
HS90A_CRIGR7.736e-5559.89Heat shock protein HSP 90-alpha OS=Cricetulus gris... [more]

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Properties
Property NameValue
Genbank descriptionEST0427 Mature peel (flavedo) cDNA subtraction library Citrus sinensis cDNA clone 6P099 similar to heat shock protein 90 Grp94 (acc# AAN34791), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB417347 ID=CB417347; Name=CB417347; organism=Citrus sinensis; type=EST; length=628bp
ACCAAATGGTTTGTCGACAGATTCTGACGTGGCAAAGAGGGAAGCGGAGT
CGATCTCGAAGAGGTCACTTCGTAATAATGCGGAGAAATTTGAATTCCAA
GCTGAGGTGTCTCGGCTCATGGATATTATCATCAATTCTCTTTACGGCAA
CAAAGATATTTTCCTCAGAGAGTTGATTTCCAATGCTTCTGATGCACTAG
ACAAGATTAGATTCCTCTCTTTGACTGACAAAGAGGTCTTGGGAGAAGGA
GACAACACTAAGCTGGAGATCCAGATTAAGCTAGACAAAGAGAAGAAAAT
TCTTTCAATTCGTGACAGAGGTATTGGTATGACGAAGGAGGATTTAATCA
AGAACTTGGGAACCATTGCAAAATCTGGAACATCAGCATTTGTTGAGAAA
ATGCAGACTAGCGGTGACCCCAATCTTATTGGGCAATTTGGTGTTGGCTT
TTACTCTGTATATCTTGTTGCTGACTATGTTGAAGTCATTAGCAAACATA
ATGATGACAAACAGTATGTATGGGAATCAAAGGCTGATGGAGCATTTGCA
ATTTCTGAGGACACATGGAATGAGCCACTAGGACGCGGAACCGAGATTAA
ATTGCACCTCAGAGATGAAGCTGGGGAG
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