CB417347

Overview
NameCB417347
Unique NameCB417347
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length628
Libraries
Library NameType
Mature peel (flavedo) cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSJ (Heat shock protein 81-1 OS=Oryza sativa subsp. japonica GN=HSP81-1 PE=2 SV=2)

HSP 1 Score: 212.231 bits (539), Expect = 1.723e-54
Identity = 108/184 (58.70%), Postives = 136/184 (73.91%), Query Frame = 2
Query:   68 LRNNAEKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDE 619
            + +  E F FQAE+++L+ +IIN+ Y NK+IFLRELISN+SDALDKIRF SLTDK  L      +L I I  DK    LSI D GIGMTK DL+ NLGTIA+SGT  F+E +    D ++IGQFGVGFYS YLVA+ V V +KHNDD+QYVWES+A G+F ++ DT  E LGRGT+I L+L+D+
Sbjct:    1 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA--QPELFIHIVPDKASNTLSIIDSGIGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDD 182          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSI (Heat shock protein 81-1 OS=Oryza sativa subsp. indica GN=HSP81-1 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.723e-54
Identity = 108/184 (58.70%), Postives = 136/184 (73.91%), Query Frame = 2
Query:   68 LRNNAEKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDE 619
            + +  E F FQAE+++L+ +IIN+ Y NK+IFLRELISN+SDALDKIRF SLTDK  L      +L I I  DK    LSI D GIGMTK DL+ NLGTIA+SGT  F+E +    D ++IGQFGVGFYS YLVA+ V V +KHNDD+QYVWES+A G+F ++ DT  E LGRGT+I L+L+D+
Sbjct:    1 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA--QPELFIHIVPDKASNTLSIIDSGIGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDD 182          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HSP83_ORYSJ (Heat shock protein 81-3 OS=Oryza sativa subsp. japonica GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 2.251e-54
Identity = 107/184 (58.15%), Postives = 136/184 (73.91%), Query Frame = 2
Query:   68 LRNNAEKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDE 619
            + +  E F FQAE+++L+ +IIN+ Y NK+IFLRELISN+SDALDKIRF SLTDK  L      +L I I  DK    LSI D G+GMTK DL+ NLGTIA+SGT  F+E +    D ++IGQFGVGFYS YLVA+ V V +KHNDD+QYVWES+A G+F ++ DT  E LGRGT+I L+L+D+
Sbjct:    1 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA--QPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDD 182          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HSP82_ORYSJ (Heat shock protein 81-2 OS=Oryza sativa subsp. japonica GN=HSP81-2 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.251e-54
Identity = 107/184 (58.15%), Postives = 136/184 (73.91%), Query Frame = 2
Query:   68 LRNNAEKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDE 619
            + +  E F FQAE+++L+ +IIN+ Y NK+IFLRELISN+SDALDKIRF SLTDK  L      +L I I  DK    LSI D G+GMTK DL+ NLGTIA+SGT  F+E +    D ++IGQFGVGFYS YLVA+ V V +KHNDD+QYVWES+A G+F ++ DT  E LGRGT+I L+L+D+
Sbjct:    1 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA--QPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDD 182          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HSC90_DICDI (Heat shock cognate 90 kDa protein OS=Dictyostelium discoideum GN=hspD PE=1 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 2.251e-54
Identity = 111/183 (60.66%), Postives = 143/183 (78.14%), Query Frame = 2
Query:   74 NNAEKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQT-SGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDE 619
            +  E+F FQAE+++LM +IIN+ Y NK++FLRELISNASDALDKIR+ SLTD  VL     T+LEI+I  DK  K L++ D GIGMTK D++KNLGTIA+SGT  F+E++Q+ + D ++IGQFGVGFYS YLVAD V V SK+NDD+QYVWES A G F I+ D   EPLGRGT+I LH++++
Sbjct:    4 SQVERFTFQAEINQLMSLIINTFYSNKEVFLRELISNASDALDKIRYQSLTDASVL--ESKTELEIKIIPDKTAKTLTLIDSGIGMTKTDMVKNLGTIARSGTKNFMEQLQSGAADISMIGQFGVGFYSAYLVADTVIVHSKNNDDEQYVWESSAGGEFTIALD-HTEPLGRGTKIVLHMKED 183          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HSC82_YEAST (ATP-dependent molecular chaperone HSC82 OS=Saccharomyces cerevisiae GN=HSC82 PE=1 SV=4)

HSP 1 Score: 211.846 bits (538), Expect = 2.251e-54
Identity = 108/180 (60.00%), Postives = 143/180 (79.44%), Query Frame = 2
Query:   83 EKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTD-KEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDE 619
            E FEFQAE+++LM +IIN++Y NK+IFLRELISNASDALDKIR+ +L+D K++  E D   L I+I    E+K+L IRD GIGMTK +LI NLGTIAKSGT AF+E +    D ++IGQFGVGFYS++LVAD V+VISK+N+D+QY+WES A G+F ++ D  NE +GRGT ++L L+D+
Sbjct:    4 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQALSDPKQLETEPD---LFIRITPKPEEKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFYSLFLVADRVQVISKNNEDEQYIWESNAGGSFTVTLDEVNERIGRGTVLRLFLKDD 180          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HS90B_DANRE (Heat shock protein HSP 90-beta OS=Danio rerio GN=hsp90ab1 PE=2 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 2.251e-54
Identity = 107/183 (58.47%), Postives = 139/183 (75.96%), Query Frame = 2
Query:   80 AEKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            AE F FQAE+++LM +IIN+ Y NK+IFLREL+SNASDALDKIR+ SLTD   L  G + K++I   +  +++ L++ D GIGMTK DLI NLGTIAKSGT AF+E +Q   D ++IGQFGVGFYS YLVA+ V VI+KHNDD+QY WES A G+F +  D   EP+GRGT++ LHL+++  E
Sbjct:   11 AETFAFQAEIAQLMSLIINTFYSNKEIFLRELVSNASDALDKIRYESLTDPTKLDSGKDLKIDIIPNV--QERTLTLIDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVKVD-HGEPIGRGTKVILHLKEDQTE 190          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: H90A1_DANRE (Heat shock protein HSP 90-alpha 1 OS=Danio rerio GN=hsp90a.1 PE=2 SV=3)

HSP 1 Score: 211.46 bits (537), Expect = 2.940e-54
Identity = 109/195 (55.90%), Postives = 146/195 (74.87%), Query Frame = 2
Query:   47 ESISKRSLRNNAEKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTK-LEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            E  ++  +    E F FQAE+++LM +IIN+ Y NK+IFLRELISN+SDALDKIR+ SLTD   L   D+ K L+I++  D++++ L+I D GIGMTK DLI NLGTIAKSGT AF+E +Q   D ++IGQFGVGFYS YLVA+ V VI+KHNDD+QY+WES A G+F +  D + E +GRGT++ LHL+++  E
Sbjct:    3 EKSAQPVMEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKL---DSCKDLKIELIPDQKERTLTIIDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYIWESAAGGSFTVKPD-FGESIGRGTKVILHLKEDQSE 193          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HS90B_MOUSE (Heat shock protein HSP 90-beta OS=Mus musculus GN=Hsp90ab1 PE=1 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 3.839e-54
Identity = 108/182 (59.34%), Postives = 138/182 (75.82%), Query Frame = 2
Query:   83 EKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            E F FQAE+++LM +IIN+ Y NK+IFLRELISNASDALDKIR+ SLTD   L  G   +L+I I  + +++ L++ D GIGMTK DLI NLGTIAKSGT AF+E +Q   D ++IGQFGVGFYS YLVA+ V VI+KHNDD+QY WES A G+F +  D   EP+GRGT++ LHL+++  E
Sbjct:   13 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGK--ELKIDILPNPQERTLTLVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTE 191          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HS90A_PANTR (Heat shock protein HSP 90-alpha OS=Pan troglodytes GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 3.839e-54
Identity = 108/182 (59.34%), Postives = 137/182 (75.27%), Query Frame = 2
Query:   83 EKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            E F FQAE+++LM +IIN+ Y NK+IFLRELISN+SDALDKIR+ SLTD   L  G   +L I +  +K+ + L+I D GIGMTK DLI NLGTIAKSGT AF+E +Q   D ++IGQFGVGFYS YLVA+ V VI+KHNDD+QY WES A G+F +  DT  EP+GRGT++  HL+++  E
Sbjct:   18 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGK--ELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVIPHLKEDQTE 196          
The following BLAST results are available for this feature:
BLAST of CB417347 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
HSP81_ORYSJ1.723e-5458.70Heat shock protein 81-1 OS=Oryza sativa subsp. jap... [more]
HSP81_ORYSI1.723e-5458.70Heat shock protein 81-1 OS=Oryza sativa subsp. ind... [more]
HSP83_ORYSJ2.251e-5458.15Heat shock protein 81-3 OS=Oryza sativa subsp. jap... [more]
HSP82_ORYSJ2.251e-5458.15Heat shock protein 81-2 OS=Oryza sativa subsp. jap... [more]
HSC90_DICDI2.251e-5460.66Heat shock cognate 90 kDa protein OS=Dictyostelium... [more]
HSC82_YEAST2.251e-5460.00ATP-dependent molecular chaperone HSC82 OS=Sacchar... [more]
HS90B_DANRE2.251e-5458.47Heat shock protein HSP 90-beta OS=Danio rerio GN=h... [more]
H90A1_DANRE2.940e-5455.90Heat shock protein HSP 90-alpha 1 OS=Danio rerio G... [more]
HS90B_MOUSE3.839e-5459.34Heat shock protein HSP 90-beta OS=Mus musculus GN=... [more]
HS90A_PANTR3.839e-5459.34Heat shock protein HSP 90-alpha OS=Pan troglodytes... [more]

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Properties
Property NameValue
Genbank descriptionEST0427 Mature peel (flavedo) cDNA subtraction library Citrus sinensis cDNA clone 6P099 similar to heat shock protein 90 Grp94 (acc# AAN34791), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB417347 ID=CB417347; Name=CB417347; organism=Citrus sinensis; type=EST; length=628bp
ACCAAATGGTTTGTCGACAGATTCTGACGTGGCAAAGAGGGAAGCGGAGT
CGATCTCGAAGAGGTCACTTCGTAATAATGCGGAGAAATTTGAATTCCAA
GCTGAGGTGTCTCGGCTCATGGATATTATCATCAATTCTCTTTACGGCAA
CAAAGATATTTTCCTCAGAGAGTTGATTTCCAATGCTTCTGATGCACTAG
ACAAGATTAGATTCCTCTCTTTGACTGACAAAGAGGTCTTGGGAGAAGGA
GACAACACTAAGCTGGAGATCCAGATTAAGCTAGACAAAGAGAAGAAAAT
TCTTTCAATTCGTGACAGAGGTATTGGTATGACGAAGGAGGATTTAATCA
AGAACTTGGGAACCATTGCAAAATCTGGAACATCAGCATTTGTTGAGAAA
ATGCAGACTAGCGGTGACCCCAATCTTATTGGGCAATTTGGTGTTGGCTT
TTACTCTGTATATCTTGTTGCTGACTATGTTGAAGTCATTAGCAAACATA
ATGATGACAAACAGTATGTATGGGAATCAAAGGCTGATGGAGCATTTGCA
ATTTCTGAGGACACATGGAATGAGCCACTAGGACGCGGAACCGAGATTAA
ATTGCACCTCAGAGATGAAGCTGGGGAG
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