CB417347

Overview
NameCB417347
Unique NameCB417347
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length628
Libraries
Library NameType
Mature peel (flavedo) cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HSP83_DROMI (Heat shock protein 83 (Fragment) OS=Drosophila miranda GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.117e-53
Identity = 110/182 (60.44%), Postives = 137/182 (75.27%), Query Frame = 2
Query:   80 AEKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKL--DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDE 619
            AE F FQAE+++LM +IIN+ Y NK+IFLRELISNASDALDKIR+ SLTD   L  G     E+ IKL  +K    L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D ++IGQFGVGFYS YL+AD V V SK+NDD+QYVWES A G+F +  D  +EPLGRGT+I L+++++
Sbjct:    5 AETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGK----ELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLIADRVTVTSKNNDDEQYVWESSAGGSFTVKADN-SEPLGRGTKIXLYIKED 181          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HSP83_ANOGA (Heat shock protein 83 OS=Anopheles gambiae GN=Hsp83 PE=3 SV=3)

HSP 1 Score: 209.534 bits (532), Expect = 1.117e-53
Identity = 109/179 (60.89%), Postives = 137/179 (76.54%), Query Frame = 2
Query:   83 EKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDE 619
            E F FQAE+++LM +IIN+ Y NK+IFLRELISN+SDALDKIR+ SLTD   L  G   +L I+I  +KE   L++ D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D ++IGQFGVGFYS YLVAD V V SK+NDD+QYVWES A G+F +  D+  EPLGRGT+I LH++++
Sbjct:    8 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLESGK--ELFIKIIPNKEAGTLTLIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADKVVVTSKNNDDEQYVWESSAGGSFTVRPDS-GEPLGRGTKIVLHIKED 183          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HSP83_DROSI (Heat shock protein 83 (Fragment) OS=Drosophila simulans GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.459e-53
Identity = 111/182 (60.99%), Postives = 137/182 (75.27%), Query Frame = 2
Query:   80 AEKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKL--DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDE 619
            AE F FQAE+++LM +IIN+ Y NK+IFLRELISNASDALDKIR+ SLTD   L  G     E+ IKL  +K    L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D ++IGQFGVGFYS YLVAD V V SK+NDD+QYVWES A G+F +  D  +EPLGRGT+I L+++++
Sbjct:    5 AETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGK----ELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADKVTVTSKNNDDEQYVWESSAGGSFTVRADN-SEPLGRGTKIVLYIKED 181          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HSP83_DROPS (Heat shock protein 83 OS=Drosophila pseudoobscura pseudoobscura GN=Hsp83 PE=3 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 1.459e-53
Identity = 110/182 (60.44%), Postives = 137/182 (75.27%), Query Frame = 2
Query:   80 AEKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKL--DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDE 619
            AE F FQAE+++LM +IIN+ Y NK+IFLRELISNASDALDKIR+ SLTD   L  G     E+ IKL  +K    L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D ++IGQFGVGFYS YL+AD V V SK+NDD+QYVWES A G+F +  D  +EPLGRGT+I L+++++
Sbjct:    5 AETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGK----ELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLIADRVTVTSKNNDDEQYVWESSAGGSFTVKADN-SEPLGRGTKIVLYIKED 181          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HSP83_DROME (Heat shock protein 83 OS=Drosophila melanogaster GN=Hsp83 PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.459e-53
Identity = 111/182 (60.99%), Postives = 137/182 (75.27%), Query Frame = 2
Query:   80 AEKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKL--DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDE 619
            AE F FQAE+++LM +IIN+ Y NK+IFLRELISNASDALDKIR+ SLTD   L  G     E+ IKL  +K    L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D ++IGQFGVGFYS YLVAD V V SK+NDD+QYVWES A G+F +  D  +EPLGRGT+I L+++++
Sbjct:    5 AETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGK----ELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADKVTVTSKNNDDEQYVWESSAGGSFTVRADN-SEPLGRGTKIVLYIKED 181          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HSP82_MAIZE (Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.459e-53
Identity = 110/182 (60.44%), Postives = 137/182 (75.27%), Query Frame = 2
Query:   83 EKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKL--DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSG-DPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDE 619
            E F FQAE+++L+ +IIN+ Y NK+IFLRELISNASDALDKIRF SLTDK  +    N + E+ I+L  DK  K LSI D G+GMTK DL+ NLGTIA+SGT  F+E +     D ++IGQFGVGFYS YLVAD V V +KHNDD+QYVWES+A G+F ++ DT  E LGRGT+I L L+D+
Sbjct:   15 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSNV----NAQPELFIRLVPDKASKTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALAAGATDVSMIGQFGVGFYSAYLVADRVMVTTKHNDDEQYVWESQAGGSFTVTHDTTGEQLGRGTKITLFLKDD 192          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HSP83_DROAV (Heat shock protein 83 OS=Drosophila auraria GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 1.905e-53
Identity = 110/182 (60.44%), Postives = 137/182 (75.27%), Query Frame = 2
Query:   80 AEKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKL--DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDE 619
            AE F FQAE+++LM +IIN+ Y NK+IFLRELISNASDALDKIR+ SLTD   L  G     E+ IKL  +K    L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D ++IGQFGVGFYS YLVAD V V SK+NDD+QY+WES A G+F +  D  +EPLGRGT+I L+++++
Sbjct:    5 AETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGK----ELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADKVTVTSKNNDDEQYIWESSAGGSFTVRADN-SEPLGRGTKIVLYIKED 181          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HSP83_LEIIN (Heat shock protein 83-1 OS=Leishmania infantum GN=HSP83-1 PE=3 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 2.489e-53
Identity = 108/182 (59.34%), Postives = 135/182 (74.18%), Query Frame = 2
Query:   83 EKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            E F FQAE+++LM +IIN+ Y NK+IFLRELISNASDA DKIR+ SLTD  VLGE  + +L I++  DKE K L++ D GIGMTK DL+ NLGTIA+SGT AF+E ++  GD ++IGQFGVGFYS YLVAD V V SK+N D+ YVWES A G F I+  T    + RGT I LHL+++  E
Sbjct:    3 ETFAFQAEINQLMSLIINTFYSNKEIFLRELISNASDACDKIRYQSLTDPSVLGE--SPRLCIRVVPDKENKTLTVEDNGIGMTKADLVNNLGTIARSGTKAFMEALEAGGDMSMIGQFGVGFYSAYLVADRVTVTSKNNSDESYVWESSACGTFTIT-STPESDMKRGTRITLHLKEDQME 181          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HSP83_DROVI (Heat shock protein 83 (Fragment) OS=Drosophila virilis GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 3.250e-53
Identity = 111/182 (60.99%), Postives = 136/182 (74.73%), Query Frame = 2
Query:   80 AEKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKL--DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDE 619
            AE F FQAE+++LM +IIN+ Y NK+IFLRELISNASDALDKIR+ SLTD   L  G     E+ IKL  +K    L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D ++IGQFGVGFYS YLVAD V V SK+NDD+QYVWES A G+F +  D  +EPLGRGT+I L ++++
Sbjct:    5 AETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGK----ELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADKVTVTSKNNDDEQYVWESSAGGSFTVRADN-SEPLGRGTKIVLFIKED 181          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HSP80_SOLLC (Heat shock cognate protein 80 OS=Solanum lycopersicum GN=HSC80 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 7.241e-53
Identity = 105/182 (57.69%), Postives = 136/182 (74.73%), Query Frame = 2
Query:   74 NNAEKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDE 619
            ++ E F FQAE+++L+ +IIN+ Y NK+IFLRELISN+SDALDKIRF SLTDK  L      +L I I  DK    L+I D GIGMTK DL+ NLGTIA+SGT  F+E +    D ++IGQFGVGFYS YLVA+ V V +KHNDD+QYVWES+A G+F ++ DT  E LGRGT++ L+L+++
Sbjct:    2 SDVETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD--GQPELFIHIIPDKANNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAEKVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGENLGRGTKMVLYLKED 181          
The following BLAST results are available for this feature:
BLAST of CB417347 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
HSP83_DROMI1.117e-5360.44Heat shock protein 83 (Fragment) OS=Drosophila mir... [more]
HSP83_ANOGA1.117e-5360.89Heat shock protein 83 OS=Anopheles gambiae GN=Hsp8... [more]
HSP83_DROSI1.459e-5360.99Heat shock protein 83 (Fragment) OS=Drosophila sim... [more]
HSP83_DROPS1.459e-5360.44Heat shock protein 83 OS=Drosophila pseudoobscura ... [more]
HSP83_DROME1.459e-5360.99Heat shock protein 83 OS=Drosophila melanogaster G... [more]
HSP82_MAIZE1.459e-5360.44Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV... [more]
HSP83_DROAV1.905e-5360.44Heat shock protein 83 OS=Drosophila auraria GN=Hsp... [more]
HSP83_LEIIN2.489e-5359.34Heat shock protein 83-1 OS=Leishmania infantum GN=... [more]
HSP83_DROVI3.250e-5360.99Heat shock protein 83 (Fragment) OS=Drosophila vir... [more]
HSP80_SOLLC7.241e-5357.69Heat shock cognate protein 80 OS=Solanum lycopersi... [more]

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Properties
Property NameValue
Genbank descriptionEST0427 Mature peel (flavedo) cDNA subtraction library Citrus sinensis cDNA clone 6P099 similar to heat shock protein 90 Grp94 (acc# AAN34791), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB417347 ID=CB417347; Name=CB417347; organism=Citrus sinensis; type=EST; length=628bp
ACCAAATGGTTTGTCGACAGATTCTGACGTGGCAAAGAGGGAAGCGGAGT
CGATCTCGAAGAGGTCACTTCGTAATAATGCGGAGAAATTTGAATTCCAA
GCTGAGGTGTCTCGGCTCATGGATATTATCATCAATTCTCTTTACGGCAA
CAAAGATATTTTCCTCAGAGAGTTGATTTCCAATGCTTCTGATGCACTAG
ACAAGATTAGATTCCTCTCTTTGACTGACAAAGAGGTCTTGGGAGAAGGA
GACAACACTAAGCTGGAGATCCAGATTAAGCTAGACAAAGAGAAGAAAAT
TCTTTCAATTCGTGACAGAGGTATTGGTATGACGAAGGAGGATTTAATCA
AGAACTTGGGAACCATTGCAAAATCTGGAACATCAGCATTTGTTGAGAAA
ATGCAGACTAGCGGTGACCCCAATCTTATTGGGCAATTTGGTGTTGGCTT
TTACTCTGTATATCTTGTTGCTGACTATGTTGAAGTCATTAGCAAACATA
ATGATGACAAACAGTATGTATGGGAATCAAAGGCTGATGGAGCATTTGCA
ATTTCTGAGGACACATGGAATGAGCCACTAGGACGCGGAACCGAGATTAA
ATTGCACCTCAGAGATGAAGCTGGGGAG
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