CB417347

Overview
NameCB417347
Unique NameCB417347
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length628
Libraries
Library NameType
Mature peel (flavedo) cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HS90B_CHICK (Heat shock cognate protein HSP 90-beta OS=Gallus gallus GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.235e-52
Identity = 106/185 (57.30%), Postives = 136/185 (73.51%), Query Frame = 2
Query:   74 NNAEKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            +  E F FQAE+++LM +IIN+ Y NK+IFLRELISNASDALDKIR+ SLTD   L  G +  L+I I  +     L++ D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D ++IGQFGVGFYS YLVA+ V VI+KHNDD+QY WES A G+F +  D   EP+GRGT++ L+L+++  E
Sbjct:   10 DEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDTGKD--LKIDIVPNPRDPTLTLLDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRTD-HGEPIGRGTKVILYLKEDQTE 191          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HS902_HUMAN (Putative heat shock protein HSP 90-alpha A2 OS=Homo sapiens GN=HSP90AA2 PE=1 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 3.593e-52
Identity = 106/182 (58.24%), Postives = 135/182 (74.18%), Query Frame = 2
Query:   83 EKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            E F FQAE+++LM +IIN+ Y NK+IFLRELISN+SDALDKI + SLTD   L  G   +L I +  +K+ + L+I D GIGMTK DLI NLGTIAKSGT AF+E +Q   D ++IGQFGV FYS YLVA+ V VI+KHNDD+QY WES A G+F +  DT  E +GRGT++ LHL+++  E
Sbjct:   18 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIWYESLTDPSKLDSGK--ELHINLIPNKQDQTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVSFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GERMGRGTKVILHLKEDQTE 196          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HSP85_TRYCR (Heat shock-like 85 kDa protein OS=Trypanosoma cruzi PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 4.693e-52
Identity = 104/182 (57.14%), Postives = 136/182 (74.73%), Query Frame = 2
Query:   83 EKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            E F FQAE+++LM +IIN+ Y NK+IFLRELISN+SDA DKIR+ SLT++ VLG  D + L I++  DK  K L++ D GIGMTK +L+ NLGTIA+SGT AF+E ++  GD ++IGQFGVGFYS YLVAD V V+SK+NDD+ Y WES A G F ++  T +  L RGT I LHL+++  E
Sbjct:    3 ETFAFQAEINQLMSLIINTFYSNKEIFLRELISNSSDACDKIRYQSLTNQAVLG--DESHLRIRVVPDKANKTLTVEDTGIGMTKAELVNNLGTIARSGTKAFMEALEAGGDMSMIGQFGVGFYSAYLVADRVTVVSKNNDDEAYTWESSAGGTFTVT-PTPDCDLKRGTRIVLHLKEDQQE 181          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HSP83_DROPE (Heat shock protein 83 (Fragment) OS=Drosophila persimilis GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.783e-51
Identity = 108/182 (59.34%), Postives = 133/182 (73.08%), Query Frame = 2
Query:   80 AEKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKL--DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDE 619
            AE F FQAE+++LM +IIN+ Y NK+IFLRELISNASDALDKIR+ SLTD   L  G     E+ IKL  +K    L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D ++IGQFGVGFYS YL+AD V V SK+NDD+QYVWES   G+F    D   EPL RGT+I L+++++
Sbjct:    5 AETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGK----ELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLIADRVTVTSKNNDDEQYVWESXXXGSFTXKADN-XEPLXRGTKIXLYIKED 181          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HSP83_TRYBB (Heat shock protein 83 OS=Trypanosoma brucei brucei GN=HSP83 PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 6.777e-51
Identity = 102/182 (56.04%), Postives = 134/182 (73.63%), Query Frame = 2
Query:   83 EKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            E F FQAE+++LM +IIN+ Y NK+IFLRELISN+SDA DKIR+ SLT++ VLG  D   L I++  D+  K L++ D GIGMTK DL+ NLGTIA+SGT +F+E ++  GD ++IGQFGVGFYS YLVAD V V+SK+N+D  Y WES A G F ++  T +  L RGT I LHL+++  E
Sbjct:    3 ETFAFQAEINQLMSLIINTFYSNKEIFLRELISNSSDACDKIRYQSLTNQSVLG--DEPHLRIRVIPDRVNKTLTVEDSGIGMTKADLVNNLGTIARSGTKSFMEALEAGGDMSMIGQFGVGFYSAYLVADRVTVVSKNNEDDAYTWESSAGGTFTVT-STPDCDLKRGTRIVLHLKEDQQE 181          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HSP90_CAEEL (Heat shock protein 90 OS=Caenorhabditis elegans GN=daf-21 PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.156e-50
Identity = 104/185 (56.22%), Postives = 138/185 (74.59%), Query Frame = 2
Query:   68 LRNNAEKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEP-LGRGTEIKLHLRDE 619
            +  NAE F FQAE+++LM +IIN+ Y NK+I+LRELISNASDALDKIR+ +LT+   L  G   +L I+I  +KE+K L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D ++IGQFGVGFYS +LVAD V V SK+NDD  Y WES A G+F +    +N+P + RGT+I +H++++
Sbjct:    1 MSENAETFAFQAEIAQLMSLIINTFYSNKEIYLRELISNASDALDKIRYQALTEPSELDTGK--ELFIKITPNKEEKTLTIMDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAFLVADKVVVTSKNNDDDSYQWESSAGGSFVVR--PFNDPEVTRGTKIVMHIKED 181          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HSP90_THEPA (Heat shock protein 90 OS=Theileria parva GN=TP02_0244 PE=2 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 1.510e-50
Identity = 100/182 (54.95%), Postives = 131/182 (71.98%), Query Frame = 2
Query:   83 EKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            E + F A++S+L+ +IIN+ Y NK+IFLRELISNASDAL+KIR+ ++ D + +   D     I++  DK    L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D ++IGQFGVGFYS YLVAD V V+SK+N D QYVWES A G F + +D  +EPL RGT + LHL+++  E
Sbjct:   11 EVYAFNADISQLLSLIINAFYSNKEIFLRELISNASDALEKIRYEAIKDPKQIE--DQPDYYIRLYADKNNNTLTIEDSGIGMTKADLVNNLGTIAKSGTRAFMEALQAGSDMSMIGQFGVGFYSAYLVADKVTVVSKNNADDQYVWESTASGHFTVKKDDSHEPLKRGTRLILHLKEDQTE 190          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HSP90_THEAN (Heat shock protein 90 OS=Theileria annulata GN=TA12105 PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.510e-50
Identity = 100/182 (54.95%), Postives = 130/182 (71.43%), Query Frame = 2
Query:   83 EKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            E + F A++S+L+ +IIN+ Y NK+IFLRELISNASDAL+KIR+ ++ D + +   D     I++  DK    L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D ++IGQFGVGFYS YLVAD V V+SK+N D QYVWES A G F +  D  +EPL RGT + LHL+++  E
Sbjct:   11 EVYAFNADISQLLSLIINAFYSNKEIFLRELISNASDALEKIRYEAIKDPKQIE--DQPDYYIRLYADKNNNTLTIEDSGIGMTKADLVNNLGTIAKSGTRAFMEALQAGSDMSMIGQFGVGFYSAYLVADKVTVVSKNNADDQYVWESSASGHFTVKRDDSHEPLKRGTRLILHLKEDQTE 190          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HSP90_CAEBR (Heat shock protein 90 OS=Caenorhabditis briggsae GN=daf-21 PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.510e-50
Identity = 104/185 (56.22%), Postives = 138/185 (74.59%), Query Frame = 2
Query:   68 LRNNAEKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDPNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEP-LGRGTEIKLHLRDE 619
            +  NAE F FQAE+++LM +IIN+ Y NK+I+LRELISNASDALDKIR+ +LT+   L  G   +L I+I  +KE+K L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D ++IGQFGVGFYS +LVAD V V SK+NDD  Y WES A G+F +    +N+P L RGT+I ++++++
Sbjct:    1 MSENAETFAFQAEIAQLMSLIINTFYSNKEIYLRELISNASDALDKIRYQALTEPSELDTGK--ELFIKITPNKEEKTLTIMDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAFLVADKVVVTSKNNDDDSYQWESSAGGSFVVR--PYNDPELTRGTKITMYIKED 181          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: ENPL_RABIT (Endoplasmin (Fragment) OS=Oryctolagus cuniculus GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 5.737e-50
Identity = 105/181 (58.01%), Postives = 135/181 (74.59%), Query Frame = 2
Query:  101 AEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGD-----PNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            AEV+R+M +IINSLY NK+IFLRELISNASDALDKIR +SLTD++ L    N +L ++IK DKEK +L + D G+GMT+E+L+KNLGTIAKSGTS F+ KM  + +       LIGQFGVGFYS +LVAD V V SKHN+D Q++WES ++  F++  D     LGRGT I L L++EA +
Sbjct:    1 AEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDEQAL--SGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFLVADKVIVTSKHNNDTQHIWESDSN-EFSVIADPRGNTLGRGTTITLVLKEEASD 178          
The following BLAST results are available for this feature:
BLAST of CB417347 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
HS90B_CHICK1.235e-5257.30Heat shock cognate protein HSP 90-beta OS=Gallus g... [more]
HS902_HUMAN3.593e-5258.24Putative heat shock protein HSP 90-alpha A2 OS=Hom... [more]
HSP85_TRYCR4.693e-5257.14Heat shock-like 85 kDa protein OS=Trypanosoma cruz... [more]
HSP83_DROPE1.783e-5159.34Heat shock protein 83 (Fragment) OS=Drosophila per... [more]
HSP83_TRYBB6.777e-5156.04Heat shock protein 83 OS=Trypanosoma brucei brucei... [more]
HSP90_CAEEL1.156e-5056.22Heat shock protein 90 OS=Caenorhabditis elegans GN... [more]
HSP90_THEPA1.510e-5054.95Heat shock protein 90 OS=Theileria parva GN=TP02_0... [more]
HSP90_THEAN1.510e-5054.95Heat shock protein 90 OS=Theileria annulata GN=TA1... [more]
HSP90_CAEBR1.510e-5056.22Heat shock protein 90 OS=Caenorhabditis briggsae G... [more]
ENPL_RABIT5.737e-5058.01Endoplasmin (Fragment) OS=Oryctolagus cuniculus GN... [more]

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Properties
Property NameValue
Genbank descriptionEST0427 Mature peel (flavedo) cDNA subtraction library Citrus sinensis cDNA clone 6P099 similar to heat shock protein 90 Grp94 (acc# AAN34791), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB417347 ID=CB417347; Name=CB417347; organism=Citrus sinensis; type=EST; length=628bp
ACCAAATGGTTTGTCGACAGATTCTGACGTGGCAAAGAGGGAAGCGGAGT
CGATCTCGAAGAGGTCACTTCGTAATAATGCGGAGAAATTTGAATTCCAA
GCTGAGGTGTCTCGGCTCATGGATATTATCATCAATTCTCTTTACGGCAA
CAAAGATATTTTCCTCAGAGAGTTGATTTCCAATGCTTCTGATGCACTAG
ACAAGATTAGATTCCTCTCTTTGACTGACAAAGAGGTCTTGGGAGAAGGA
GACAACACTAAGCTGGAGATCCAGATTAAGCTAGACAAAGAGAAGAAAAT
TCTTTCAATTCGTGACAGAGGTATTGGTATGACGAAGGAGGATTTAATCA
AGAACTTGGGAACCATTGCAAAATCTGGAACATCAGCATTTGTTGAGAAA
ATGCAGACTAGCGGTGACCCCAATCTTATTGGGCAATTTGGTGTTGGCTT
TTACTCTGTATATCTTGTTGCTGACTATGTTGAAGTCATTAGCAAACATA
ATGATGACAAACAGTATGTATGGGAATCAAAGGCTGATGGAGCATTTGCA
ATTTCTGAGGACACATGGAATGAGCCACTAGGACGCGGAACCGAGATTAA
ATTGCACCTCAGAGATGAAGCTGGGGAG
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