CB417347

Overview
NameCB417347
Unique NameCB417347
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length628
Libraries
Library NameType
Mature peel (flavedo) cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HTPG_SHESW (Chaperone protein htpG OS=Shewanella sp. (strain W3-18-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.185e-41
Identity = 92/187 (49.20%), Postives = 131/187 (70.05%), Query Frame = 2
Query:   83 EKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDPNLIGQFGVGFYSVYLVADYVEVISK---HNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            E   FQ EV +L+ ++I+SLY NK+IFLREL+SNA+DA DK+R+L+LT+ + L EGD  +L ++I  DK+K  ++I D G+GMT++ +I++LGTIAKSGT+ F + +  + S D  LIGQFGVGFYS ++VA  V V ++   H  D+  +WES+ +G+F +   T      RGTEI LHLRDE  E
Sbjct:    5 ETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTN-DALYEGDG-ELRVRISADKDKGTVTIEDNGVGMTRDGVIEHLGTIAKSGTAEFFKNLSGEASKDSQLIGQFGVGFYSAFIVAKKVTVRTRAAGHKADEAVLWESEGEGSFTVETIT---KASRGTEITLHLRDEEKE 186          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HTPG_SHEPC (Chaperone protein htpG OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=htpG PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.185e-41
Identity = 92/187 (49.20%), Postives = 131/187 (70.05%), Query Frame = 2
Query:   83 EKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDPNLIGQFGVGFYSVYLVADYVEVISK---HNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            E   FQ EV +L+ ++I+SLY NK+IFLREL+SNA+DA DK+R+L+LT+ + L EGD  +L ++I  DK+K  ++I D G+GMT++ +I++LGTIAKSGT+ F + +  + S D  LIGQFGVGFYS ++VA  V V ++   H  D+  +WES+ +G+F +   T      RGTEI LHLRDE  E
Sbjct:    5 ETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTN-DALYEGDG-ELRVRISADKDKGTVTIEDNGVGMTRDGVIEHLGTIAKSGTAEFFKNLSGEASKDSQLIGQFGVGFYSAFIVAKKVTVRTRAAGHKADEAVLWESEGEGSFTVETIT---KASRGTEITLHLRDEEKE 186          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HTPG_SHEB9 (Chaperone protein htpG OS=Shewanella baltica (strain OS195) GN=htpG PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.185e-41
Identity = 93/187 (49.73%), Postives = 131/187 (70.05%), Query Frame = 2
Query:   83 EKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDPNLIGQFGVGFYSVYLVADYVEVISK---HNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            E   FQ EV +L+ ++I+SLY NK+IFLREL+SNA+DA DK+R+L+LT+ + L EGD  +L ++I  DKEK  ++I D G+GMT++ +I++LGTIAKSGT+ F + +  ++S D  LIGQFGVGFYS ++VA  V V ++   H  D+  +WES+ +G F +   T      RGTEI LHLRDE  E
Sbjct:    5 ETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTN-DALYEGDG-ELRVRISADKEKGTVTIEDNGVGMTRDGVIEHLGTIAKSGTADFFKNLSGESSKDSQLIGQFGVGFYSAFIVAKKVTVRTRAAGHKADEAVLWESEGEGNFTVDTIT---KASRGTEITLHLRDEEKE 186          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HTPG_SHEB8 (Chaperone protein htpG OS=Shewanella baltica (strain OS185) GN=htpG PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.185e-41
Identity = 93/187 (49.73%), Postives = 131/187 (70.05%), Query Frame = 2
Query:   83 EKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDPNLIGQFGVGFYSVYLVADYVEVISK---HNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            E   FQ EV +L+ ++I+SLY NK+IFLREL+SNA+DA DK+R+L+LT+ + L EGD  +L ++I  DKEK  ++I D G+GMT++ +I++LGTIAKSGT+ F + +  ++S D  LIGQFGVGFYS ++VA  V V ++   H  D+  +WES+ +G F +   T      RGTEI LHLRDE  E
Sbjct:    5 ETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTN-DALYEGDG-ELRVRISADKEKGTVTIEDNGVGMTRDGVIEHLGTIAKSGTADFFKNLSGESSKDSQLIGQFGVGFYSAFIVAKKVTVRTRAAGHKADEAVLWESEGEGNFTVDTIT---KASRGTEITLHLRDEEKE 186          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HTPG_SHEB5 (Chaperone protein htpG OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=htpG PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.185e-41
Identity = 93/187 (49.73%), Postives = 131/187 (70.05%), Query Frame = 2
Query:   83 EKFEFQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDPNLIGQFGVGFYSVYLVADYVEVISK---HNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            E   FQ EV +L+ ++I+SLY NK+IFLREL+SNA+DA DK+R+L+LT+ + L EGD  +L ++I  DKEK  ++I D G+GMT++ +I++LGTIAKSGT+ F + +  ++S D  LIGQFGVGFYS ++VA  V V ++   H  D+  +WES+ +G F +   T      RGTEI LHLRDE  E
Sbjct:    5 ETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTN-DALYEGDG-ELRVRISADKEKGTVTIEDNGVGMTRDGVIEHLGTIAKSGTADFFKNLSGESSKDSQLIGQFGVGFYSAFIVAKKVTVRTRAAGHKADEAVLWESEGEGNFTVDTIT---KASRGTEITLHLRDEEKE 186          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HTPG_ERWCT (Chaperone protein htpG OS=Erwinia carotovora subsp. atroseptica GN=htpG PE=3 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 2.854e-41
Identity = 94/184 (51.09%), Postives = 131/184 (71.20%), Query Frame = 2
Query:   95 FQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEV-LGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTS--GDPNLIGQFGVGFYSVYLVADYVEVISK---HNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            FQ+EV +L+ ++I+SLY NK+IFLRELISNASDA DK+RF +L+  E+  G+GD   L +++  DKEK+ L+I D GIGM+++++I NLGTIAKSGT +F+E M +    D  LIGQFGVGFYS ++VAD V V ++    N D+   WES  +G + I++ T ++   RGTEI LHLR+   E
Sbjct:    9 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSTPELYAGDGD---LRVRVSTDKEKRTLTISDNGIGMSRDEVIDNLGTIAKSGTKSFLESMGSDQVKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGANADQGVYWESAGEGDYTIADITKDD---RGTEITLHLREGEDE 186          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HTPG_YERPS (Chaperone protein htpG OS=Yersinia pseudotuberculosis GN=htpG PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 3.727e-41
Identity = 95/183 (51.91%), Postives = 130/183 (71.04%), Query Frame = 2
Query:   95 FQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDPNLIGQFGVGFYSVYLVADYVEVISKHND---DKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            FQ+EV +L+ ++I+SLY NK+IFLRELISNASDA DK+RF +L++ E L EGD  +L +++  DKEK+ L++ D GIGMT++++I NLGTIAKSGT AF+E +    + D  LIGQFGVGFYS ++VAD V V ++      D    WES  +G + I++ T +E   RGTEI LHLR+   E
Sbjct:   11 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPE-LFEGDG-ELRVRLSFDKEKRTLTLSDNGIGMTRDEVIDNLGTIAKSGTKAFLESIGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGAPADTGVFWESAGEGDYTIADITKDE---RGTEITLHLREGEDE 188          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HTPG_YERPP (Chaperone protein htpG OS=Yersinia pestis (strain Pestoides F) GN=htpG PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 3.727e-41
Identity = 95/183 (51.91%), Postives = 130/183 (71.04%), Query Frame = 2
Query:   95 FQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDPNLIGQFGVGFYSVYLVADYVEVISKHND---DKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            FQ+EV +L+ ++I+SLY NK+IFLRELISNASDA DK+RF +L++ E L EGD  +L +++  DKEK+ L++ D GIGMT++++I NLGTIAKSGT AF+E +    + D  LIGQFGVGFYS ++VAD V V ++      D    WES  +G + I++ T +E   RGTEI LHLR+   E
Sbjct:   11 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPE-LFEGDG-ELRVRLSFDKEKRTLTLSDNGIGMTRDEVIDNLGTIAKSGTKAFLESIGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGAPADTGVFWESAGEGDYTIADITKDE---RGTEITLHLREGEDE 188          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HTPG_YERPN (Chaperone protein htpG OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=htpG PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 3.727e-41
Identity = 95/183 (51.91%), Postives = 130/183 (71.04%), Query Frame = 2
Query:   95 FQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDPNLIGQFGVGFYSVYLVADYVEVISKHND---DKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            FQ+EV +L+ ++I+SLY NK+IFLRELISNASDA DK+RF +L++ E L EGD  +L +++  DKEK+ L++ D GIGMT++++I NLGTIAKSGT AF+E +    + D  LIGQFGVGFYS ++VAD V V ++      D    WES  +G + I++ T +E   RGTEI LHLR+   E
Sbjct:   11 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPE-LFEGDG-ELRVRLSFDKEKRTLTLSDNGIGMTRDEVIDNLGTIAKSGTKAFLESIGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGAPADTGVFWESAGEGDYTIADITKDE---RGTEITLHLREGEDE 188          
BLAST of CB417347 vs. ExPASy Swiss-Prot
Match: HTPG_YERPE (Chaperone protein htpG OS=Yersinia pestis GN=htpG PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 3.727e-41
Identity = 95/183 (51.91%), Postives = 130/183 (71.04%), Query Frame = 2
Query:   95 FQAEVSRLMDIIINSLYGNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDPNLIGQFGVGFYSVYLVADYVEVISKHND---DKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGE 628
            FQ+EV +L+ ++I+SLY NK+IFLRELISNASDA DK+RF +L++ E L EGD  +L +++  DKEK+ L++ D GIGMT++++I NLGTIAKSGT AF+E +    + D  LIGQFGVGFYS ++VAD V V ++      D    WES  +G + I++ T +E   RGTEI LHLR+   E
Sbjct:    9 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPE-LFEGDG-ELRVRLSFDKEKRTLTLSDNGIGMTRDEVIDNLGTIAKSGTKAFLESIGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGAPADTGVFWESAGEGDYTIADITKDE---RGTEITLHLREGEDE 186          
The following BLAST results are available for this feature:
BLAST of CB417347 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
HTPG_SHESW2.185e-4149.20Chaperone protein htpG OS=Shewanella sp. (strain W... [more]
HTPG_SHEPC2.185e-4149.20Chaperone protein htpG OS=Shewanella putrefaciens ... [more]
HTPG_SHEB92.185e-4149.73Chaperone protein htpG OS=Shewanella baltica (stra... [more]
HTPG_SHEB82.185e-4149.73Chaperone protein htpG OS=Shewanella baltica (stra... [more]
HTPG_SHEB52.185e-4149.73Chaperone protein htpG OS=Shewanella baltica (stra... [more]
HTPG_ERWCT2.854e-4151.09Chaperone protein htpG OS=Erwinia carotovora subsp... [more]
HTPG_YERPS3.727e-4151.91Chaperone protein htpG OS=Yersinia pseudotuberculo... [more]
HTPG_YERPP3.727e-4151.91Chaperone protein htpG OS=Yersinia pestis (strain ... [more]
HTPG_YERPN3.727e-4151.91Chaperone protein htpG OS=Yersinia pestis bv. Anti... [more]
HTPG_YERPE3.727e-4151.91Chaperone protein htpG OS=Yersinia pestis GN=htpG ... [more]

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Properties
Property NameValue
Genbank descriptionEST0427 Mature peel (flavedo) cDNA subtraction library Citrus sinensis cDNA clone 6P099 similar to heat shock protein 90 Grp94 (acc# AAN34791), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB417347 ID=CB417347; Name=CB417347; organism=Citrus sinensis; type=EST; length=628bp
ACCAAATGGTTTGTCGACAGATTCTGACGTGGCAAAGAGGGAAGCGGAGT
CGATCTCGAAGAGGTCACTTCGTAATAATGCGGAGAAATTTGAATTCCAA
GCTGAGGTGTCTCGGCTCATGGATATTATCATCAATTCTCTTTACGGCAA
CAAAGATATTTTCCTCAGAGAGTTGATTTCCAATGCTTCTGATGCACTAG
ACAAGATTAGATTCCTCTCTTTGACTGACAAAGAGGTCTTGGGAGAAGGA
GACAACACTAAGCTGGAGATCCAGATTAAGCTAGACAAAGAGAAGAAAAT
TCTTTCAATTCGTGACAGAGGTATTGGTATGACGAAGGAGGATTTAATCA
AGAACTTGGGAACCATTGCAAAATCTGGAACATCAGCATTTGTTGAGAAA
ATGCAGACTAGCGGTGACCCCAATCTTATTGGGCAATTTGGTGTTGGCTT
TTACTCTGTATATCTTGTTGCTGACTATGTTGAAGTCATTAGCAAACATA
ATGATGACAAACAGTATGTATGGGAATCAAAGGCTGATGGAGCATTTGCA
ATTTCTGAGGACACATGGAATGAGCCACTAGGACGCGGAACCGAGATTAA
ATTGCACCTCAGAGATGAAGCTGGGGAG
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