CB417348

Overview
NameCB417348
Unique NameCB417348
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length358
Libraries
Library NameType
Mature peel (flavedo) cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB417348 vs. ExPASy Swiss-Prot
Match: DNAJ_BACP2 (Chaperone protein dnaJ OS=Bacillus pumilus (strain SAFR-032) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.018e-15
Identity = 39/84 (46.43%), Postives = 54/84 (64.29%), Query Frame = 3
Query:    3 KVLGVERNASQREIQKAFHKLSLQYHPDKNKNKAAQEKFAEINNAYDILSDEEKRKNYDLYGDEKGSPGFDAGHPGNPGGYTYF 254
            +VLGV ++AS+ EI+KA+ KLS +YHPD NK   + EKF E+  AY+ LSD++KR  YD +G    + GF  G  G  G +  F
Sbjct:    8 EVLGVSKSASKDEIKKAYRKLSKKYHPDINKEAGSDEKFKEVKEAYETLSDDQKRSQYDQFGHTDPNQGFGGGGFGGGGDFGGF 91          
BLAST of CB417348 vs. ExPASy Swiss-Prot
Match: DNAJ_BACA2 (Chaperone protein dnaJ OS=Bacillus amyloliquefaciens (strain FZB42) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.018e-15
Identity = 40/85 (47.06%), Postives = 55/85 (64.71%), Query Frame = 3
Query:    3 KVLGVERNASQREIQKAFHKLSLQYHPDKNKNKAAQEKFAEINNAYDILSDEEKRKNYDLYGDEKGSPGFDAGHPGNP--GGYTY 251
            +VLGV ++AS+ EI+KA+ KLS +YHPD NK   A EKF E+  AY+ LSD++KR  YD +G    + GF  G  G    GG+ +
Sbjct:    8 EVLGVSKSASKDEIKKAYRKLSKKYHPDINKESGADEKFKEVKEAYEALSDDQKRAQYDQFGHTDPNQGFGGGFGGGGDFGGFGF 92          
BLAST of CB417348 vs. ExPASy Swiss-Prot
Match: DNAJH_SYNY3 (DnAJ-like protein slr0093 OS=Synechocystis sp. (strain PCC 6803) GN=slr0093 PE=4 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.018e-15
Identity = 46/91 (50.55%), Postives = 60/91 (65.93%), Query Frame = 3
Query:    3 KVLGVERNASQREIQKAFHKLSLQYHPDKNK-NKAAQEKFAEINNAYDILSDEEKRKNYDLYGDEKGSPGFDAGHPGNPGGYTYFTSGGPG 272
            ++LGV + AS+ EI+K F KL+L+YHPDKN  +KAA+EKF EI+ AY++LSD EKR+ YD +    G     AG  G P G     S GPG
Sbjct:   11 QILGVTKTASEAEIKKQFRKLALKYHPDKNPGDKAAEEKFKEISEAYEVLSDPEKRQKYDQF----GRYWQQAGTAGQPSG-----SYGPG 92          
BLAST of CB417348 vs. ExPASy Swiss-Prot
Match: DJB11_RAT (DnaJ homolog subfamily B member 11 OS=Rattus norvegicus GN=Dnajb11 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.018e-15
Identity = 39/75 (52.00%), Postives = 54/75 (72.00%), Query Frame = 3
Query:    3 KVLGVERNASQREIQKAFHKLSLQYHPDKNKNKA-AQEKFAEINNAYDILSDEEKRKNYDLYGDEKGSPGFDAGH 224
            K+LGV R+AS ++I+KA+ KL+LQ HPD+N +   AQEKF ++  AY++LSD EKRK YD YG+E    G  + H
Sbjct:   28 KILGVPRSASIKDIKKAYRKLALQLHPDRNPDDPQAQEKFQDLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSSH 102          
BLAST of CB417348 vs. ExPASy Swiss-Prot
Match: DJB11_PONAB (DnaJ homolog subfamily B member 11 OS=Pongo abelii GN=DNAJB11 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.018e-15
Identity = 39/75 (52.00%), Postives = 54/75 (72.00%), Query Frame = 3
Query:    3 KVLGVERNASQREIQKAFHKLSLQYHPDKNKNKA-AQEKFAEINNAYDILSDEEKRKNYDLYGDEKGSPGFDAGH 224
            K+LGV R+AS ++I+KA+ KL+LQ HPD+N +   AQEKF ++  AY++LSD EKRK YD YG+E    G  + H
Sbjct:   28 KILGVPRSASIKDIKKAYRKLALQLHPDRNPDDPQAQEKFQDLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSSH 102          
BLAST of CB417348 vs. ExPASy Swiss-Prot
Match: DJB11_MOUSE (DnaJ homolog subfamily B member 11 OS=Mus musculus GN=Dnajb11 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.018e-15
Identity = 39/75 (52.00%), Postives = 54/75 (72.00%), Query Frame = 3
Query:    3 KVLGVERNASQREIQKAFHKLSLQYHPDKNKNKA-AQEKFAEINNAYDILSDEEKRKNYDLYGDEKGSPGFDAGH 224
            K+LGV R+AS ++I+KA+ KL+LQ HPD+N +   AQEKF ++  AY++LSD EKRK YD YG+E    G  + H
Sbjct:   28 KILGVPRSASIKDIKKAYRKLALQLHPDRNPDDPQAQEKFQDLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSSH 102          
BLAST of CB417348 vs. ExPASy Swiss-Prot
Match: DJB11_HUMAN (DnaJ homolog subfamily B member 11 OS=Homo sapiens GN=DNAJB11 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.018e-15
Identity = 39/75 (52.00%), Postives = 54/75 (72.00%), Query Frame = 3
Query:    3 KVLGVERNASQREIQKAFHKLSLQYHPDKNKNKA-AQEKFAEINNAYDILSDEEKRKNYDLYGDEKGSPGFDAGH 224
            K+LGV R+AS ++I+KA+ KL+LQ HPD+N +   AQEKF ++  AY++LSD EKRK YD YG+E    G  + H
Sbjct:   28 KILGVPRSASIKDIKKAYRKLALQLHPDRNPDDPQAQEKFQDLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSSH 102          
BLAST of CB417348 vs. ExPASy Swiss-Prot
Match: DJB11_CANFA (DnaJ homolog subfamily B member 11 OS=Canis familiaris GN=DNAJB11 PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 1.018e-15
Identity = 39/75 (52.00%), Postives = 54/75 (72.00%), Query Frame = 3
Query:    3 KVLGVERNASQREIQKAFHKLSLQYHPDKNKNKA-AQEKFAEINNAYDILSDEEKRKNYDLYGDEKGSPGFDAGH 224
            K+LGV R+AS ++I+KA+ KL+LQ HPD+N +   AQEKF ++  AY++LSD EKRK YD YG+E    G  + H
Sbjct:   28 KILGVPRSASIKDIKKAYRKLALQLHPDRNPDDPRAQEKFQDLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSSH 102          
BLAST of CB417348 vs. ExPASy Swiss-Prot
Match: DJB11_BOVIN (DnaJ homolog subfamily B member 11 OS=Bos taurus GN=DNAJB11 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.018e-15
Identity = 39/75 (52.00%), Postives = 54/75 (72.00%), Query Frame = 3
Query:    3 KVLGVERNASQREIQKAFHKLSLQYHPDKNKNKA-AQEKFAEINNAYDILSDEEKRKNYDLYGDEKGSPGFDAGH 224
            K+LGV R+AS ++I+KA+ KL+LQ HPD+N +   AQEKF ++  AY++LSD EKRK YD YG+E    G  + H
Sbjct:   28 KILGVPRSASIKDIKKAYRKLALQLHPDRNPDDPRAQEKFQDLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSSH 102          
BLAST of CB417348 vs. ExPASy Swiss-Prot
Match: DNJB1_MOUSE (DnaJ homolog subfamily B member 1 OS=Mus musculus GN=Dnajb1 PE=2 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 1.330e-15
Identity = 41/92 (44.57%), Postives = 57/92 (61.96%), Query Frame = 3
Query:    3 KVLGVERNASQREIQKAFHKLSLQYHPDKNKNKAAQEKFAEINNAYDILSDEEKRKNYDLYGDE---KGSPGFDAGHPGNPGGYTYFTSGGP 269
            + LG+ R AS  EI++A+ + +L+YHPDKNK   A+EKF EI  AYD+LSD  KR+ +D YG+E    GSP   +    N   ++Y   G P
Sbjct:    7 QTLGLARGASDDEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGGSPSGGSSGGANGTSFSYTFHGDP 98          
The following BLAST results are available for this feature:
BLAST of CB417348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_BACP21.018e-1546.43Chaperone protein dnaJ OS=Bacillus pumilus (strain... [more]
DNAJ_BACA21.018e-1547.06Chaperone protein dnaJ OS=Bacillus amyloliquefacie... [more]
DNAJH_SYNY31.018e-1550.55DnAJ-like protein slr0093 OS=Synechocystis sp. (st... [more]
DJB11_RAT1.018e-1552.00DnaJ homolog subfamily B member 11 OS=Rattus norve... [more]
DJB11_PONAB1.018e-1552.00DnaJ homolog subfamily B member 11 OS=Pongo abelii... [more]
DJB11_MOUSE1.018e-1552.00DnaJ homolog subfamily B member 11 OS=Mus musculus... [more]
DJB11_HUMAN1.018e-1552.00DnaJ homolog subfamily B member 11 OS=Homo sapiens... [more]
DJB11_CANFA1.018e-1552.00DnaJ homolog subfamily B member 11 OS=Canis famili... [more]
DJB11_BOVIN1.018e-1552.00DnaJ homolog subfamily B member 11 OS=Bos taurus G... [more]
DNJB1_MOUSE1.330e-1544.57DnaJ homolog subfamily B member 1 OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionEST0428 Mature peel (flavedo) cDNA subtraction library Citrus sinensis cDNA clone 6P100 similar to DNAJ homolog (acc# NP_187509), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB417348 ID=CB417348; Name=CB417348; organism=Citrus sinensis; type=EST; length=358bp
ACAAGGTTCTTGGCGTTGAGCGGAATGCGAGCCAGCGTGAGATTCAAAAA
GCTTTCCACAAGCTCTCTCTTCAATATCACCCGGACAAGAACAAAAATAA
GGCTGCTCAGGAGAAGTTCGCTGAGATTAATAATGCATATGATATTTTAT
CTGATGAAGAGAAGAGGAAAAATTATGATTTGTATGGGGATGAGAAGGGC
AGTCCTGGATTTGATGCTGGGCATCCTGGGAATCCAGGTGGGTATACATA
CTTCACAAGTGGTGGACCGGGACAAAGCCAGTTTACCTCTAGACCTGGTG
AATGGCAGAATATGGGGGGGCAGGGAAGTTCCCGGAGCTTTTCGTTTTCC
TTCGGCGG
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