CB417360
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB417360 vs. ExPASy Swiss-Prot
Match: HSP11_CHERU (18.3 kDa class I heat shock protein OS=Chenopodium rubrum GN=HSP18 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 7.643e-36 Identity = 76/141 (53.90%), Postives = 102/141 (72.34%), Query Frame = 2 Query: 56 MAMIPS--FFGSQHDSILDPFSFD-VWNPFKDFAFPSLSSRFPR-----ETSAIVNTRMD*KETPEAHVFKVDLAGLTKEDVKLQIEDDRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDG 454 M++IP+ F + +I DPFS D +W+PF F PS S PR ET+A N R+D KETPEAHVFK DL G+ KE+VK+++ED VL+I+ R E+E+KN+TWHRVERS G+F+R+FRLPEN K+DQV+A +E+G Sbjct: 1 MSLIPNNWFNTGRRSNIFDPFSLDEIWDPF--FGLPSTLSTVPRSETAAETAAFANARIDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLRISGQRAREKEEKNDTWHRVERSSGQFMRKFRLPENAKVDQVKAGMENG 139
BLAST of CB417360 vs. ExPASy Swiss-Prot
Match: HS17A_ORYSJ (17.9 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.9A PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 6.471e-35 Identity = 74/157 (47.13%), Postives = 101/157 (64.33%), Query Frame = 2 Query: 86 QHDSILDPFSFDVWNPFKDFAFPSLSSR-------FPR----ETSAIVNTRMD*KETPEAHVFKVDLAGLTKEDVKLQIEDDRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDGXXXXXXXXXXXXXXXXXAIEISG 523 + ++ DPFS D+W+PF F F S S FPR ET+A R+D KETPEAHVFK D+ GL KE+VK++++D +LQI+ +RN E+E+K + WHRVERS GKFLRRFRLP+N K +Q++AS+E+G +I+ISG Sbjct: 5 RRSNVFDPFSLDLWDPFDGFPFGSGGSSSGSIFPSFPRGASSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPEQIKASMENGVLTVTVPKEEAKKPDVKSIQISG 161
BLAST of CB417360 vs. ExPASy Swiss-Prot
Match: HS16A_ORYSJ (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica GN=HSP16.9A PE=1 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 6.471e-35 Identity = 69/146 (47.26%), Postives = 96/146 (65.75%), Query Frame = 2 Query: 86 QHDSILDPFSFDVWNPFKDFAFPSLSSRFPRETSAIVNTRMD*KETPEAHVFKVDLAGLTKEDVKLQIEDDRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDGXXXXXXXXXXXXXXXXXAIEISG 523 + ++ DPFS D+W+PF + + +T+A N R+D KETPE+HVFK DL G+ KE+VK+++E+ VL I+ R+ E+EDKN+ WHRVERS G+F+RRFRLPEN K+DQV+A +E+G AIEISG Sbjct: 5 RRSNVFDPFSLDLWDPFDSVFRSVVPATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGLENGVLTVTVPKAEVKKPEVKAIEISG 150
BLAST of CB417360 vs. ExPASy Swiss-Prot
Match: HS16B_ORYSJ (16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP16.9B PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 8.451e-35 Identity = 69/146 (47.26%), Postives = 96/146 (65.75%), Query Frame = 2 Query: 86 QHDSILDPFSFDVWNPFKDFAFPSLSSRFPRETSAIVNTRMD*KETPEAHVFKVDLAGLTKEDVKLQIEDDRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDGXXXXXXXXXXXXXXXXXAIEISG 523 + ++ DPFS D+W+PF + + +T+A N R+D KETPE+HVFK DL G+ KE+VK+++E+ VL I+ R+ E+EDKN+ WHRVERS G+F+RRFRLPEN K+DQV+A +E+G AIEISG Sbjct: 5 RRSNVFDPFSLDLWDPFDSVFRSVVPATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGMENGVLTVTVPKAEVKKPEVKAIEISG 150
BLAST of CB417360 vs. ExPASy Swiss-Prot
Match: HS181_ORYSJ (18.1 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.1 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.459e-34 Identity = 72/134 (53.73%), Postives = 95/134 (70.90%), Query Frame = 2 Query: 86 QHDSILDPFSFDVWNPFKDFAFPSLSSR-------FPR----ETSAIVNTRMD*KETPEAHVFKVDLAGLTKEDVKLQIEDDRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDG 454 + ++ DPFS D+W+PF F F S S FPR ET+A R+D KETPEAHVFK D+ GL KE+VK+++ED VLQI+ +R+ E+E+K + WHRVERS GKFLRRFRLPEN K +Q++AS+E+G Sbjct: 5 RRSNVFDPFSLDLWDPFDGFPFGSGSRSSGSIFPSFPRGTSSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENG 138
BLAST of CB417360 vs. ExPASy Swiss-Prot
Match: HS174_ORYSJ (17.4 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.4 PE=2 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 2.459e-34 Identity = 75/150 (50.00%), Postives = 99/150 (66.00%), Query Frame = 2 Query: 86 QHDSILDPFSFDVWNPFKDFAFPSLS-SRFPRETS---AIVNTRMD*KETPEAHVFKVDLAGLTKEDVKLQIEDDRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDGXXXXXXXXXXXXXXXXXAIEISG 523 + ++ DPFS D+W+PF F F S S S FPR S A R+D KETPEAHVFK D+ GL KE+VK+++ED VLQI+ +R E+E+K + WHRVERS GKFLRRFRLPEN K +Q++AS+E+G +I+I+G Sbjct: 5 RRSNVFDPFSLDLWDPFDGFPFGSGSGSLFPRANSDAAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQITG 154
BLAST of CB417360 vs. ExPASy Swiss-Prot
Match: HS16C_ORYSJ (16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica GN=HSP16.9C PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 7.154e-34 Identity = 74/147 (50.34%), Postives = 100/147 (68.03%), Query Frame = 2 Query: 86 QHDSILDPFSFDVWNPFKDFAFPSL-SSRFPRETSAIVNTRMD*KETPEAHVFKVDLAGLTKEDVKLQIEDDRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDGXXXXXXXXXXXXXXXXXAIEISG 523 + ++ DPF+ D W+PF D F SL + R+T+A N R+D KETPE+HVFK DL G+ KE+VK+++E+ VL I+ R+ E+EDKN+ WHRVERS G+F+RRFRLPEN K+DQV+AS+E+G AIEISG Sbjct: 5 RRSNVFDPFA-DFWDPF-DGVFRSLVPATSDRDTAAFANARVDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKASMENGVLTVTVPKAEVKKPEVKAIEISG 149
BLAST of CB417360 vs. ExPASy Swiss-Prot
Match: HS16A_WHEAT (16.9 kDa class I heat shock protein 1 OS=Triticum aestivum GN=hsp16.9A PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 2.301e-32 Identity = 72/149 (48.32%), Postives = 101/149 (67.79%), Query Frame = 2 Query: 86 QHDSILDPFSFDVW-NPFKDFA--FPSLSSRFPRETSAIVNTRMD*KETPEAHVFKVDLAGLTKEDVKLQIEDDRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDGXXXXXXXXXXXXXXXXXAIEISG 523 + ++ DPF+ D+W +PF F P++S ET+A N R+D KETPEAHVFKVDL G+ KE+VK+++ED VL ++ +R+ E+EDKN+ WHRVERS GKF+RRFRLPE+ K+++V+A +E+G AIEISG Sbjct: 5 RRSNVFDPFA-DLWADPFDTFRSIVPAISGG-SSETAAFANARVDWKETPEAHVFKVDLPGVKKEEVKVEVEDGNVLVVSGERSREKEDKNDKWHRVERSSGKFVRRFRLPEDAKVEEVKAGLENGVLTVTVPKAEVKKPEVKAIEISG 151
BLAST of CB417360 vs. ExPASy Swiss-Prot
Match: HS177_ORYSJ (17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.7 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 3.926e-32 Identity = 71/149 (47.65%), Postives = 95/149 (63.76%), Query Frame = 2 Query: 104 DPFSFDVWNPFKDFAF------PSLSSRFPRETS---AIVNTRMD*KETPEAHVFKVDLAGLTKEDVKLQIEDDRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDGXXXXXXXXXXXXXXXXXAIEISG 523 DPFS D+W+P F F S S FPR S A R+D KETPE HVFK D+ GL KE+VK++++D +LQI+ +R+ E+E+K++ WHRVERS GKFLRRFRLPEN K +Q++AS+E+G +I+ISG Sbjct: 11 DPFSLDLWDPVDGFPFGSGGSSSSSGSLFPRANSDAAAFAGARIDWKETPEVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQISG 159
BLAST of CB417360 vs. ExPASy Swiss-Prot
Match: HS16B_WHEAT (16.9 kDa class I heat shock protein 2 OS=Triticum aestivum GN=hsp16.9B PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.263e-30 Identity = 70/146 (47.95%), Postives = 97/146 (66.44%), Query Frame = 2 Query: 95 SILDPFSFDVW-NPFKDFA--FPSLSSRFPRETSAIVNTRMD*KETPEAHVFKVDLAGLTKEDVKLQIEDDRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDGXXXXXXXXXXXXXXXXXAIEISG 523 ++ DPF+ D+W +PF F P++S ET+A N RMD KETPEAHVFK DL G+ KE+VK+++ED VL ++ +R E+EDKN+ WHRVERS GKF+RRFRL E+ K+++V+A +E+G AI+ISG Sbjct: 8 NVFDPFA-DLWADPFDTFRSIVPAISGG-GSETAAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAEVKKPEVKAIQISG 151 The following BLAST results are available for this feature:
BLAST of CB417360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CB417360 ID=CB417360; Name=CB417360; organism=Citrus sinensis; type=EST; length=543bpback to top |