CB417363

Overview
NameCB417363
Unique NameCB417363
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length432
Libraries
Library NameType
Mature peel (flavedo) cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB417363 vs. ExPASy Swiss-Prot
Match: GSTF2_ORYSJ (Probable glutathione S-transferase GSTF2 OS=Oryza sativa subsp. japonica GN=GSTF2 PE=1 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 2.854e-16
Identity = 43/90 (47.78%), Postives = 56/90 (62.22%), Query Frame = 3
Query:    9 MFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 278
            MFG   D   VEEN  KL K+L+VYEARL++ KYLA D  ++ DL H+     L  TP   + DA PHV AW  D+ +RP+  KV +L+K
Sbjct:  123 MFGAPPDEKVVEENLEKLKKVLEVYEARLTKCKYLAGDYISVADLSHVAGTVCLGATPHASVLDAYPHVKAWWTDLMARPSSQKVASLMK 212          
BLAST of CB417363 vs. ExPASy Swiss-Prot
Match: GSTF1_ORYSJ (Probable glutathione S-transferase GSTF1 OS=Oryza sativa subsp. japonica GN=GSTF1 PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 4.868e-16
Identity = 41/89 (46.07%), Postives = 57/89 (64.04%), Query Frame = 3
Query:    9 MFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALL 275
            M G+ T+   V+E+  KL K+L+VYEARLSQS YLA D  +  DL+H P     +GTP   LFD+ PHV AW   + +RP+  K+ A++
Sbjct:  126 MRGIPTNQKVVDESAEKLKKVLEVYEARLSQSTYLAGDFVSFADLNHFPYTFYFMGTPYASLFDSYPHVKAWWERLMARPSVKKLAAVM 214          
BLAST of CB417363 vs. ExPASy Swiss-Prot
Match: GSTF3_ARATH (Glutathione S-transferase ERD13 OS=Arabidopsis thaliana GN=ERD13 PE=1 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 4.121e-15
Identity = 44/90 (48.89%), Postives = 59/90 (65.56%), Query Frame = 3
Query:    6 PMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKK--LFDARPHVSAWAADITSRPAWAKVLA 269
            P+ G   D   ++E+E KLA++LDVYEA+LS+++YLA D  +L DL HLP    L+G P+ K  L   R HVSAW   I+SR AW +V A
Sbjct:  121 PLMGFPADEKVIKESEEKLAEVLDVYEAQLSKNEYLAGDFVSLADLAHLPFTEYLVG-PIGKAHLIKDRKHVSAWWDKISSRAAWKEVSA 209          
BLAST of CB417363 vs. ExPASy Swiss-Prot
Match: GSTF7_ARATH (Glutathione S-transferase OS=Arabidopsis thaliana GN=At3g03190 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.489e-14
Identity = 38/91 (41.76%), Postives = 57/91 (62.64%), Query Frame = 3
Query:    3 KPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLG-TPVKKLFDARPHVSAWAADITSRPAWAKVLAL 272
            KP  G   D A VEE + K  K+LDVYE RL+ ++YL  D FTL DL H+P +  ++  T +  L  +R +++ W  +I++RPAW K++ L
Sbjct:  121 KPKSGKPCDVALVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLSHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARPAWKKLMEL 211          
BLAST of CB417363 vs. ExPASy Swiss-Prot
Match: GSTF3_MAIZE (Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE=1 SV=4)

HSP 1 Score: 75.8702 bits (185), Expect = 7.772e-14
Identity = 44/101 (43.56%), Postives = 59/101 (58.42%), Query Frame = 3
Query:    3 KPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKK-LFDARPHVSAWAADITSRPAWAKVLALLKH*TLCPLP 302
            +P+ G   D A VE++  +LAK+LDVYEA L+++KYLA D FTL D +H     L    P +     ARPHV AW   I +RPA+ K +A +      PLP
Sbjct:  121 RPLLGGAPDAAVVEKHAEQLAKVLDVYEAHLARNKYLAGDEFTLADANHALLPALTSARPPRPGCVAARPHVKAWWEAIAARPAFQKTVAAI------PLP 215          
BLAST of CB417363 vs. ExPASy Swiss-Prot
Match: GSTF4_MAIZE (Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 5.570e-12
Identity = 38/86 (44.19%), Postives = 49/86 (56.98%), Query Frame = 3
Query:    6 PMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKV 263
            P  G   + A V+EN  KL K+L+VYEARL+   YLA D  +L DL     ++ L+ T    L  A PHVSAW   + +RPA  KV
Sbjct:  123 PFLGRERNQAVVDENVEKLKKVLEVYEARLATCTYLAGDFLSLADLSPFTIMHCLMATEYAALVHALPHVSAWWQGLAARPAANKV 208          
BLAST of CB417363 vs. ExPASy Swiss-Prot
Match: GSTF1_WHEAT (Glutathione S-transferase 1 OS=Triticum aestivum GN=GSTA1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.241e-11
Identity = 35/86 (40.70%), Postives = 50/86 (58.14%), Query Frame = 3
Query:    6 PMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKV 263
            P  G   +   V+E+  +L  +L +YEARL +S+YLA DS T  DL+H+P     + TP  K+FD  P V AW   + +RPA  +V
Sbjct:  130 PGGGAAPNQTVVDESLERLRGVLGIYEARLEKSRYLAGDSITFADLNHIPFTFYFMTTPYAKVFDDYPKVKAWWEMLMARPAVQRV 215          
BLAST of CB417363 vs. ExPASy Swiss-Prot
Match: GSTF2_WHEAT (Glutathione S-transferase 2 OS=Triticum aestivum GN=GSTA2 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.764e-11
Identity = 34/86 (39.53%), Postives = 50/86 (58.14%), Query Frame = 3
Query:    6 PMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKV 263
            P  G   +   V+E+  +L  +L +YEARL +S+YLA DS +  DL+H+P     + TP  K+FD  P V AW   + +RPA  +V
Sbjct:  130 PGGGAAPNQTVVDESLERLRGVLGIYEARLEKSRYLAGDSISFADLNHIPFTFYFMTTPYAKVFDEYPKVKAWWEMLMARPAVQRV 215          
The following BLAST results are available for this feature:
BLAST of CB417363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
GSTF2_ORYSJ2.854e-1647.78Probable glutathione S-transferase GSTF2 OS=Oryza ... [more]
GSTF1_ORYSJ4.868e-1646.07Probable glutathione S-transferase GSTF1 OS=Oryza ... [more]
GSTF3_ARATH4.121e-1548.89Glutathione S-transferase ERD13 OS=Arabidopsis tha... [more]
GSTF7_ARATH3.489e-1441.76Glutathione S-transferase OS=Arabidopsis thaliana ... [more]
GSTF3_MAIZE7.772e-1443.56Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE... [more]
GSTF4_MAIZE5.570e-1244.19Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE... [more]
GSTF1_WHEAT1.241e-1140.70Glutathione S-transferase 1 OS=Triticum aestivum G... [more]
GSTF2_WHEAT2.764e-1139.53Glutathione S-transferase 2 OS=Triticum aestivum G... [more]

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Properties
Property NameValue
Genbank descriptionEST0444 Mature peel (flavedo) cDNA subtraction library Citrus sinensis cDNA clone 6P122 similar to glutathione-S-transferase (acc# AAF65767), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB417363 ID=CB417363; Name=CB417363; organism=Citrus sinensis; type=EST; length=432bp
ACAAGCCAATGTTTGGAATGACCACTGATCCAGCTGCGGTTGAAGAAAAT
GAAGCTAAGCTTGCCAAAATTTTAGATGTTTACGAGGCCCGTTTGTCTCA
GTCCAAATACTTGGCGTGCGACAGCTTCACCTTGGTCGATTTGCATCATC
TCCCCAATATTAATTTGTTGTTGGGGACGCCTGTCAAGAAGCTGTTTGAT
GCACGCCCCCATGTTAGCGCATGGGCAGCTGATATCACTTCCAGACCGGC
TTGGGCTAAGGTCCTTGCCTTGCTCAAACACTGAACACTCTGCCCGCTAC
CTACTAGACGTTAGTCGCTCCTCGGTGGTCACTTATCTTTTGTAATACCT
ATTAGGCTGGTTTTCGAGTTCGTATTCTCTTGTTTGGCGTTTGTCATCAA
TATTCTGCAGAATATTGATGCTTTGTAGTTTG
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