CB417417
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB417417 vs. ExPASy Swiss-Prot
Match: RS19_CYAP8 (30S ribosomal protein S19 OS=Cyanothece sp. (strain PCC 8801) GN=rpsS PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.428e-33 Identity = 62/90 (68.89%), Postives = 80/90 (88.89%), Query Frame = 3 Query: 90 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 359 RSLKK PFV++ LL KI+KLN K +K++I TWSRASTI+P MVGHTIA+HNG++H+P+Y++++MVGHKLGEFAPT FRGHAK+D +SRR Sbjct: 3 RSLKKGPFVSDSLLTKIEKLNEKGDKQVIKTWSRASTILPQMVGHTIAVHNGKQHVPVYVSEQMVGHKLGEFAPTRTFRGHAKSDKKSRR 92
BLAST of CB417417 vs. ExPASy Swiss-Prot
Match: RS19_THEEB (30S ribosomal protein S19 OS=Thermosynechococcus elongatus (strain BP-1) GN=rpsS PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 3.171e-33 Identity = 62/89 (69.66%), Postives = 77/89 (86.52%), Query Frame = 3 Query: 90 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSR 356 RSLKK PFVA+HLLRKI+ LN + KE+I TWSRASTI+P M+GHTIA+HNG++H+P+YIT++MVGHKLGEFAPT NFR H K D ++R Sbjct: 3 RSLKKGPFVADHLLRKIEALNERNAKEVIKTWSRASTIVPEMIGHTIAVHNGKQHVPVYITEQMVGHKLGEFAPTRNFRSHVKGDKKAR 91
BLAST of CB417417 vs. ExPASy Swiss-Prot
Match: RS19_MICAN (30S ribosomal protein S19 OS=Microcystis aeruginosa (strain NIES-843) GN=rpsS PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 5.410e-33 Identity = 61/90 (67.78%), Postives = 78/90 (86.67%), Query Frame = 3 Query: 90 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 359 RSLKK PFVA HL+ KI+KLN + K++I TWSRASTIIP MVGHTIA+HNG++H+P+Y++++MVGHKLGEFAPT FRGHAK+D ++ R Sbjct: 3 RSLKKGPFVAGHLMEKIEKLNAQGSKQVIKTWSRASTIIPDMVGHTIAVHNGKQHVPVYVSEQMVGHKLGEFAPTRTFRGHAKSDKKAGR 92
BLAST of CB417417 vs. ExPASy Swiss-Prot
Match: RS19_CYAA5 (30S ribosomal protein S19 OS=Cyanothece sp. (strain ATCC 51142) GN=rpsS PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 5.410e-33 Identity = 61/92 (66.30%), Postives = 81/92 (88.04%), Query Frame = 3 Query: 84 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 359 ++RSLKK PF+A+ LL KI+KLN K +K++I TWSRASTIIP M+GHTIA+HNG++H+PI+I+++MVGHKLGEFAPT FRGH+K D ++RR Sbjct: 1 MSRSLKKGPFIADSLLTKIEKLNEKGDKQVIKTWSRASTIIPAMIGHTIAVHNGKQHVPIFISEQMVGHKLGEFAPTRTFRGHSKGDKKARR 92
BLAST of CB417417 vs. ExPASy Swiss-Prot
Match: RS19_ANAVT (30S ribosomal protein S19 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rpsS PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 9.227e-33 Identity = 61/90 (67.78%), Postives = 79/90 (87.78%), Query Frame = 3 Query: 90 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 359 RSLKK PF+A+HLL KI+KLN K EK++I TWSRASTI+P MVGHTIA+HNGR+H+P++I+++MVGHKLGEFAPT +RGH K+D ++ R Sbjct: 3 RSLKKGPFIADHLLSKIEKLNDKNEKQVIKTWSRASTILPLMVGHTIAVHNGRQHVPVFISEQMVGHKLGEFAPTRTYRGHGKSDKKAGR 92
BLAST of CB417417 vs. ExPASy Swiss-Prot
Match: RS19_SYNP2 (30S ribosomal protein S19 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rpsS PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.205e-32 Identity = 59/90 (65.56%), Postives = 80/90 (88.89%), Query Frame = 3 Query: 90 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 359 RSLKK PF+A+ LL+KI+KLN +K++I TWSRASTI+P MVGHTIA+HNGR+H+P++++++MVGHKLGEFAPT F+GHAK+D ++RR Sbjct: 3 RSLKKGPFIADSLLKKIEKLNASGDKQVIKTWSRASTILPQMVGHTIAVHNGRQHVPVFVSEQMVGHKLGEFAPTRTFKGHAKSDKKARR 92
BLAST of CB417417 vs. ExPASy Swiss-Prot
Match: RS19_ACAM1 (30S ribosomal protein S19 OS=Acaryochloris marina (strain MBIC 11017) GN=rpsS PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.205e-32 Identity = 59/91 (64.84%), Postives = 79/91 (86.81%), Query Frame = 3 Query: 84 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSR 356 ++RSLKK PFVA+HLL K++ LN K EK++I TWSRASTIIP M+GHTIA+HNGR+H+P+Y++++MVGHKLGEFAPT F+ H+K D ++R Sbjct: 1 MSRSLKKGPFVADHLLTKVENLNEKGEKQVIKTWSRASTIIPQMIGHTIAVHNGRQHVPVYVSEQMVGHKLGEFAPTRTFKSHSKGDKKAR 91
BLAST of CB417417 vs. ExPASy Swiss-Prot
Match: RR19_LEPTE (30S ribosomal protein S19, chloroplastic OS=Leptosira terrestris GN=rps19 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.205e-32 Identity = 60/94 (63.83%), Postives = 81/94 (86.17%), Query Frame = 3 Query: 84 VTRSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGH--AKNDNRSRR 359 ++RSL K PF+A+HLL+KI KLN + +K++I+TWSRASTI+P M+GHTIA+HNGREH+P++ITD+MVGHKLGEF+PT +RGH K D +S+R Sbjct: 1 MSRSLTKGPFIADHLLKKIQKLNAQGKKKVIVTWSRASTIVPLMIGHTIAVHNGREHIPVFITDQMVGHKLGEFSPTRTYRGHIKTKGDKKSKR 94
BLAST of CB417417 vs. ExPASy Swiss-Prot
Match: RS19_SYNY3 (30S ribosomal protein S19 OS=Synechocystis sp. (strain PCC 6803) GN=rpsS PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.574e-32 Identity = 60/90 (66.67%), Postives = 79/90 (87.78%), Query Frame = 3 Query: 90 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 359 RSLKK PFVA LLRKIDKLN K +K+++ TWSRASTI+P MVGHTIA+HNGR+H+P++++++MVGHKLGEFAPT FR H+K+D ++R+ Sbjct: 3 RSLKKGPFVAASLLRKIDKLNDKGDKQVVKTWSRASTILPQMVGHTIAVHNGRQHVPVFVSEQMVGHKLGEFAPTRTFRSHSKSDKKARK 92
BLAST of CB417417 vs. ExPASy Swiss-Prot
Match: RS19_ANASP (30S ribosomal protein S19 OS=Anabaena sp. (strain PCC 7120) GN=rpsS PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.056e-32 Identity = 60/90 (66.67%), Postives = 79/90 (87.78%), Query Frame = 3 Query: 90 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 359 RSLKK PF+A+HLL KI+KLN + EK++I TWSRASTI+P MVGHTIA+HNGR+H+P++I+++MVGHKLGEFAPT +RGH K+D ++ R Sbjct: 3 RSLKKGPFIADHLLSKIEKLNDRNEKQVIKTWSRASTILPLMVGHTIAVHNGRQHVPVFISEQMVGHKLGEFAPTRTYRGHGKSDKKAGR 92 The following BLAST results are available for this feature:
BLAST of CB417417 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB417417 ID=CB417417; Name=CB417417; organism=Citrus sinensis; type=EST; length=582bpback to top |