CB417417
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB417417 vs. ExPASy Swiss-Prot
Match: RS19_PECCP (30S ribosomal protein S19 OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=rpsS PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.427e-25 Identity = 50/90 (55.56%), Postives = 68/90 (75.56%), Query Frame = 3 Query: 90 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 359 RSLKK PF+ HLL+K++K +K+ + TWSR STI P M+G TIA+HNGR+H+P++++D MVGHKLGEFAPT +RGHA + +R Sbjct: 3 RSLKKGPFIDLHLLKKVEKAVESGDKKPLRTWSRRSTIFPNMIGLTIAVHNGRQHVPVFVSDEMVGHKLGEFAPTRTYRGHAADKKAKKR 92
BLAST of CB417417 vs. ExPASy Swiss-Prot
Match: RS19_ERWT9 (30S ribosomal protein S19 OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=rpsS PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.427e-25 Identity = 50/90 (55.56%), Postives = 68/90 (75.56%), Query Frame = 3 Query: 90 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 359 RSLKK PF+ HLL+K++K +K+ + TWSR STI P M+G TIA+HNGR+H+P++++D MVGHKLGEFAPT +RGHA + +R Sbjct: 3 RSLKKGPFIDLHLLKKVEKALESGDKKPLRTWSRRSTIFPNMIGLTIAVHNGRQHVPVFVSDEMVGHKLGEFAPTRTYRGHAADKKAKKR 92
BLAST of CB417417 vs. ExPASy Swiss-Prot
Match: RS19_ERWCT (30S ribosomal protein S19 OS=Erwinia carotovora subsp. atroseptica GN=rpsS PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.427e-25 Identity = 50/90 (55.56%), Postives = 68/90 (75.56%), Query Frame = 3 Query: 90 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 359 RSLKK PF+ HLL+K++K +K+ + TWSR STI P M+G TIA+HNGR+H+P++++D MVGHKLGEFAPT +RGHA + +R Sbjct: 3 RSLKKGPFIDLHLLKKVEKAVESGDKKPLRTWSRRSTIFPNMIGLTIAVHNGRQHVPVFVSDEMVGHKLGEFAPTRTYRGHAADKKAKKR 92
BLAST of CB417417 vs. ExPASy Swiss-Prot
Match: RS19_BACSK (30S ribosomal protein S19 OS=Bacillus clausii (strain KSM-K16) GN=rpsS PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.427e-25 Identity = 49/90 (54.44%), Postives = 71/90 (78.89%), Query Frame = 3 Query: 90 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 359 RSLKK PFV HL++K++ LN +K+++ TWSR STI P +GHT A+++GR+H+P+Y+++ MVGHKLGEFAPT ++GHA D ++RR Sbjct: 3 RSLKKGPFVDGHLMKKVEALNATNDKKVVKTWSRRSTIFPDFIGHTFAVYDGRKHVPVYVSEDMVGHKLGEFAPTRTYKGHAA-DKKTRR 91
BLAST of CB417417 vs. ExPASy Swiss-Prot
Match: RS19_THESQ (30S ribosomal protein S19 OS=Thermotoga sp. (strain RQ2) GN=rpsS PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.864e-25 Identity = 53/82 (64.63%), Postives = 64/82 (78.05%), Query Frame = 3 Query: 90 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHA 335 RS KK P+V LL KI KLN EK++I TWSRAS IIP MVGHTIA++NG +H+P+YIT+ M+GH+LGEFAPT F GHA Sbjct: 3 RSSKKGPYVDKKLLEKIRKLNETGEKKVIKTWSRASMIIPEMVGHTIAVYNGMKHIPVYITENMIGHRLGEFAPTRRFGGHA 84
BLAST of CB417417 vs. ExPASy Swiss-Prot
Match: RS19_THEP1 (30S ribosomal protein S19 OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=rpsS PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.864e-25 Identity = 53/82 (64.63%), Postives = 64/82 (78.05%), Query Frame = 3 Query: 90 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHA 335 RS KK P+V LL KI KLN EK++I TWSRAS IIP MVGHTIA++NG +H+P+YIT+ M+GH+LGEFAPT F GHA Sbjct: 3 RSSKKGPYVDKKLLEKIRKLNETGEKKVIKTWSRASMIIPEMVGHTIAVYNGMKHIPVYITENMIGHRLGEFAPTRRFGGHA 84
BLAST of CB417417 vs. ExPASy Swiss-Prot
Match: RS19_THENN (30S ribosomal protein S19 OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=rpsS PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.864e-25 Identity = 53/82 (64.63%), Postives = 64/82 (78.05%), Query Frame = 3 Query: 90 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHA 335 RS KK P+V LL KI KLN EK++I TWSRAS IIP MVGHTIA++NG +H+P+YIT+ M+GH+LGEFAPT F GHA Sbjct: 3 RSKKKGPYVDRKLLEKIRKLNETGEKKVIKTWSRASMIIPEMVGHTIAVYNGMKHIPVYITENMIGHRLGEFAPTRRFGGHA 84
BLAST of CB417417 vs. ExPASy Swiss-Prot
Match: RS19_THEMA (30S ribosomal protein S19 OS=Thermotoga maritima GN=rpsS PE=3 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 1.864e-25 Identity = 53/82 (64.63%), Postives = 64/82 (78.05%), Query Frame = 3 Query: 90 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHA 335 RS KK P+V LL KI KLN EK++I TWSRAS IIP MVGHTIA++NG +H+P+YIT+ M+GH+LGEFAPT F GHA Sbjct: 3 RSRKKGPYVDRKLLEKIRKLNETGEKKVIKTWSRASMIIPEMVGHTIAVYNGMKHIPVYITENMIGHRLGEFAPTRRFGGHA 84
BLAST of CB417417 vs. ExPASy Swiss-Prot
Match: RS19_STRZT (30S ribosomal protein S19 OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=rpsS PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.864e-25 Identity = 49/90 (54.44%), Postives = 71/90 (78.89%), Query Frame = 3 Query: 90 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 359 RSLKK PFV HL++K++ +K++I TWSR STI P+ +G+TIA+++GR+H+P+YI + MVGHKLGEFAPT ++GHA +D ++RR Sbjct: 3 RSLKKGPFVDEHLMKKVEAQANDEKKKVIKTWSRRSTIFPSFIGYTIAVYDGRKHVPVYIQEDMVGHKLGEFAPTRTYKGHAADDKKTRR 92
BLAST of CB417417 vs. ExPASy Swiss-Prot
Match: RS19_STRZP (30S ribosomal protein S19 OS=Streptococcus pneumoniae (strain P1031) GN=rpsS PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.864e-25 Identity = 49/90 (54.44%), Postives = 71/90 (78.89%), Query Frame = 3 Query: 90 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 359 RSLKK PFV HL++K++ +K++I TWSR STI P+ +G+TIA+++GR+H+P+YI + MVGHKLGEFAPT ++GHA +D ++RR Sbjct: 3 RSLKKGPFVDEHLMKKVEAQANDEKKKVIKTWSRRSTIFPSFIGYTIAVYDGRKHVPVYIQEDMVGHKLGEFAPTRTYKGHAADDKKTRR 92 The following BLAST results are available for this feature:
BLAST of CB417417 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB417417 ID=CB417417; Name=CB417417; organism=Citrus sinensis; type=EST; length=582bpback to top |