CB417417
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB417417 vs. ExPASy Swiss-Prot
Match: RS19_KLEP7 (30S ribosomal protein S19 OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=rpsS PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.179e-25 Identity = 49/90 (54.44%), Postives = 68/90 (75.56%), Query Frame = 3 Query: 90 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 359 RSLKK PF+ HLL+K++K +K+ + TWSR STI P M+G TIA+HNGR+H+P++++D MVGHKLGEFAPT +RGHA + ++ Sbjct: 3 RSLKKGPFIDLHLLKKVEKAVESGDKKPLRTWSRRSTIFPNMIGLTIAVHNGRQHVPVFVSDEMVGHKLGEFAPTRTYRGHAADKKAKKK 92
BLAST of CB417417 vs. ExPASy Swiss-Prot
Match: RS19_KLEP3 (30S ribosomal protein S19 OS=Klebsiella pneumoniae (strain 342) GN=rpsS PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.179e-25 Identity = 49/90 (54.44%), Postives = 68/90 (75.56%), Query Frame = 3 Query: 90 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 359 RSLKK PF+ HLL+K++K +K+ + TWSR STI P M+G TIA+HNGR+H+P++++D MVGHKLGEFAPT +RGHA + ++ Sbjct: 3 RSLKKGPFIDLHLLKKVEKAVESGDKKPLRTWSRRSTIFPNMIGLTIAVHNGRQHVPVFVSDEMVGHKLGEFAPTRTYRGHAADKKAKKK 92
BLAST of CB417417 vs. ExPASy Swiss-Prot
Match: RS19_HAES2 (30S ribosomal protein S19 OS=Haemophilus somnus (strain 2336) GN=rpsS PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.179e-25 Identity = 50/82 (60.98%), Postives = 66/82 (80.49%), Query Frame = 3 Query: 90 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHA 335 RSLKK PF+ HLL+K++K +K+ I TWSR S IIP+M+G TIA+HNGR+H+P+Y++D M+GHKLGEFAPT +RGHA Sbjct: 3 RSLKKGPFLDLHLLKKVEKAVESGDKKPIKTWSRRSMIIPSMIGLTIAVHNGRQHVPVYVSDEMIGHKLGEFAPTRTYRGHA 84
BLAST of CB417417 vs. ExPASy Swiss-Prot
Match: RS19_HAES1 (30S ribosomal protein S19 OS=Haemophilus somnus (strain 129Pt) GN=rpsS PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.179e-25 Identity = 50/82 (60.98%), Postives = 66/82 (80.49%), Query Frame = 3 Query: 90 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHA 335 RSLKK PF+ HLL+K++K +K+ I TWSR S IIP+M+G TIA+HNGR+H+P+Y++D M+GHKLGEFAPT +RGHA Sbjct: 3 RSLKKGPFLDLHLLKKVEKAVESGDKKPIKTWSRRSMIIPSMIGLTIAVHNGRQHVPVYVSDEMIGHKLGEFAPTRTYRGHA 84
BLAST of CB417417 vs. ExPASy Swiss-Prot
Match: RS19_HAEPS (30S ribosomal protein S19 OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=rpsS PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.179e-25 Identity = 50/82 (60.98%), Postives = 66/82 (80.49%), Query Frame = 3 Query: 90 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHA 335 RSLKK PF+ HLL+K++K +K+ I TWSR S IIP+M+G TIA+HNGR+H+P+Y++D M+GHKLGEFAPT +RGHA Sbjct: 3 RSLKKGPFLDLHLLKKVEKAVESGDKKPIKTWSRRSMIIPSMIGLTIAVHNGRQHVPVYVSDEMIGHKLGEFAPTRTYRGHA 84
BLAST of CB417417 vs. ExPASy Swiss-Prot
Match: RS19_HAEIN (30S ribosomal protein S19 OS=Haemophilus influenzae GN=rpsS PE=3 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 3.179e-25 Identity = 50/82 (60.98%), Postives = 66/82 (80.49%), Query Frame = 3 Query: 90 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHA 335 RSLKK PF+ HLL+K++K +K+ I TWSR S IIP+M+G TIA+HNGR+H+P+Y++D M+GHKLGEFAPT +RGHA Sbjct: 3 RSLKKGPFLDLHLLKKVEKAVESGDKKPIKTWSRRSMIIPSMIGLTIAVHNGRQHVPVYVSDEMIGHKLGEFAPTRTYRGHA 84
BLAST of CB417417 vs. ExPASy Swiss-Prot
Match: RS19_HAEIG (30S ribosomal protein S19 OS=Haemophilus influenzae (strain PittGG) GN=rpsS PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.179e-25 Identity = 50/82 (60.98%), Postives = 66/82 (80.49%), Query Frame = 3 Query: 90 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHA 335 RSLKK PF+ HLL+K++K +K+ I TWSR S IIP+M+G TIA+HNGR+H+P+Y++D M+GHKLGEFAPT +RGHA Sbjct: 3 RSLKKGPFLDLHLLKKVEKAVESGDKKPIKTWSRRSMIIPSMIGLTIAVHNGRQHVPVYVSDEMIGHKLGEFAPTRTYRGHA 84
BLAST of CB417417 vs. ExPASy Swiss-Prot
Match: RS19_HAEIE (30S ribosomal protein S19 OS=Haemophilus influenzae (strain PittEE) GN=rpsS PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.179e-25 Identity = 50/82 (60.98%), Postives = 66/82 (80.49%), Query Frame = 3 Query: 90 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHA 335 RSLKK PF+ HLL+K++K +K+ I TWSR S IIP+M+G TIA+HNGR+H+P+Y++D M+GHKLGEFAPT +RGHA Sbjct: 3 RSLKKGPFLDLHLLKKVEKAVESGDKKPIKTWSRRSMIIPSMIGLTIAVHNGRQHVPVYVSDEMIGHKLGEFAPTRTYRGHA 84
BLAST of CB417417 vs. ExPASy Swiss-Prot
Match: RS19_HAEI8 (30S ribosomal protein S19 OS=Haemophilus influenzae (strain 86-028NP) GN=rpsS PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.179e-25 Identity = 50/82 (60.98%), Postives = 66/82 (80.49%), Query Frame = 3 Query: 90 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHA 335 RSLKK PF+ HLL+K++K +K+ I TWSR S IIP+M+G TIA+HNGR+H+P+Y++D M+GHKLGEFAPT +RGHA Sbjct: 3 RSLKKGPFLDLHLLKKVEKAVESGDKKPIKTWSRRSMIIPSMIGLTIAVHNGRQHVPVYVSDEMIGHKLGEFAPTRTYRGHA 84
BLAST of CB417417 vs. ExPASy Swiss-Prot
Match: RS19_HAEDU (30S ribosomal protein S19 OS=Haemophilus ducreyi GN=rpsS PE=3 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 3.179e-25 Identity = 50/82 (60.98%), Postives = 66/82 (80.49%), Query Frame = 3 Query: 90 RSLKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHA 335 RSLKK PF+ HLL+K++K +K+ I TWSR S IIP+M+G TIA+HNGR+H+P+Y++D M+GHKLGEFAPT +RGHA Sbjct: 3 RSLKKGPFLDLHLLKKVEKAVESGDKKPIKTWSRRSMIIPSMIGLTIAVHNGRQHVPVYVSDEMIGHKLGEFAPTRTYRGHA 84 The following BLAST results are available for this feature:
BLAST of CB417417 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB417417 ID=CB417417; Name=CB417417; organism=Citrus sinensis; type=EST; length=582bpback to top |