CB417434

Overview
NameCB417434
Unique NameCB417434
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length627
Libraries
Library NameType
Mature peel (flavedo) cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CB417434 vs. ExPASy Swiss-Prot
Match: HSP70_LEIMA (Heat shock 70 kDa protein (Fragment) OS=Leishmania major GN=HSP70 PE=3 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 8.960e-88
Identity = 162/200 (81.00%), Postives = 176/200 (88.00%), Query Frame = 2 
Query:   26 SIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVAGPGDKPMIVVTYKGEEKQFAPEEISSMVLTKMKEIAEAYLGQALKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRSGEKNVLIFDLGG 625
            +IGIDLGTTYSCVGVWQN+R++IIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D  VQSDM+HWPFKV     DKP+I V Y+GEEK F PEEISSMVL KMKE AEAYLG+ +K AVVTVPAYFNDSQRQATKDAG IAGL V+RIINEPTAAAIAYGLD K     E+NVLIFDLGG
Sbjct:    6 AIGIDLGTTYSCVGVWQNERLDIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFNDSVVQSDMKHWPFKVTTKGDDKPVISVQYRGEEKTFTPEEISSMVLLKMKETAEAYLGKQVKKAVVTVPAYFNDSQRQATKDAGTIAGLEVVRIINEPTAAAIAYGLD-KGDDGKERNVLIFDLGG 204
[Close]
BLAST of CB417434 vs. ExPASy Swiss-Prot
Match: HSP7D_DROME (Heat shock 70 kDa protein cognate 4 OS=Drosophila melanogaster GN=Hsc70-4 PE=1 SV=3)

HSP 1 Score: 322.013 bits (824), Expect = 1.528e-87
Identity = 163/200 (81.50%), Postives = 180/200 (90.00%), Query Frame = 2 
Query:   26 SIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVAGPGDKPMIVVTYKGEEKQFAPEEISSMVLTKMKEIAEAYLGQALKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRSGEKNVLIFDLGG 625
            ++GIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP  T+FDAKRLIGR+F D +VQSDM+HWPF+VV+  G KP I VTYK E+K F PEEISSMVLTKMKE AEAYLG+ + NAV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYGLDKKA   GE+NVLIFDLGG
Sbjct:    6 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTQTIFDAKRLIGRKFDDAAVQSDMKHWPFEVVSADG-KPKIEVTYKDEKKTFFPEEISSMVLTKMKETAEAYLGKTVTNAVITVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKA--VGERNVLIFDLGG 202
[Close]
BLAST of CB417434 vs. ExPASy Swiss-Prot
Match: HSP7C_SAGOE (Heat shock cognate 71 kDa protein OS=Saguinus oedipus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 1.528e-87
Identity = 164/203 (80.79%), Postives = 178/203 (87.68%), Query Frame = 2 
Query:   17 EGKSIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVAGPGDKPMIVVTYKGEEKQFAPEEISSMVLTKMKEIAEAYLGQALKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRSGEKNVLIFDLGG 625
            +G ++GIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGRRF D  VQSDM+HWPF VV   G +P + V YKGE K F PEE+SSMVLTKMKEIAEAYLG+ + NAVVTVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYGLDKK     E+NVLIFDLGG
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAG-RPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKV--GAERNVLIFDLGG 202
[Close]
BLAST of CB417434 vs. ExPASy Swiss-Prot
Match: HSP7C_RAT (Heat shock cognate 71 kDa protein OS=Rattus norvegicus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 1.528e-87
Identity = 164/203 (80.79%), Postives = 178/203 (87.68%), Query Frame = 2 
Query:   17 EGKSIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVAGPGDKPMIVVTYKGEEKQFAPEEISSMVLTKMKEIAEAYLGQALKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRSGEKNVLIFDLGG 625
            +G ++GIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGRRF D  VQSDM+HWPF VV   G +P + V YKGE K F PEE+SSMVLTKMKEIAEAYLG+ + NAVVTVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYGLDKK     E+NVLIFDLGG
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAG-RPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKV--GAERNVLIFDLGG 202
[Close]
BLAST of CB417434 vs. ExPASy Swiss-Prot
Match: HSP7C_MOUSE (Heat shock cognate 71 kDa protein OS=Mus musculus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 1.528e-87
Identity = 164/203 (80.79%), Postives = 178/203 (87.68%), Query Frame = 2 
Query:   17 EGKSIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVAGPGDKPMIVVTYKGEEKQFAPEEISSMVLTKMKEIAEAYLGQALKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRSGEKNVLIFDLGG 625
            +G ++GIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGRRF D  VQSDM+HWPF VV   G +P + V YKGE K F PEE+SSMVLTKMKEIAEAYLG+ + NAVVTVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYGLDKK     E+NVLIFDLGG
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAG-RPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKV--GAERNVLIFDLGG 202
[Close]
BLAST of CB417434 vs. ExPASy Swiss-Prot
Match: HSP7C_HUMAN (Heat shock cognate 71 kDa protein OS=Homo sapiens GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 1.528e-87
Identity = 164/203 (80.79%), Postives = 178/203 (87.68%), Query Frame = 2 
Query:   17 EGKSIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVAGPGDKPMIVVTYKGEEKQFAPEEISSMVLTKMKEIAEAYLGQALKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRSGEKNVLIFDLGG 625
            +G ++GIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGRRF D  VQSDM+HWPF VV   G +P + V YKGE K F PEE+SSMVLTKMKEIAEAYLG+ + NAVVTVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYGLDKK     E+NVLIFDLGG
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAG-RPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKV--GAERNVLIFDLGG 202
[Close]
BLAST of CB417434 vs. ExPASy Swiss-Prot
Match: HSP7C_HORSE (Heat shock cognate 71 kDa protein OS=Equus caballus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 1.528e-87
Identity = 164/203 (80.79%), Postives = 178/203 (87.68%), Query Frame = 2 
Query:   17 EGKSIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVAGPGDKPMIVVTYKGEEKQFAPEEISSMVLTKMKEIAEAYLGQALKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRSGEKNVLIFDLGG 625
            +G ++GIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGRRF D  VQSDM+HWPF VV   G +P + V YKGE K F PEE+SSMVLTKMKEIAEAYLG+ + NAVVTVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYGLDKK     E+NVLIFDLGG
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAG-RPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKV--GAERNVLIFDLGG 202
[Close]
BLAST of CB417434 vs. ExPASy Swiss-Prot
Match: HSP7C_CRIGR (Heat shock cognate 71 kDa protein OS=Cricetulus griseus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 1.528e-87
Identity = 164/203 (80.79%), Postives = 178/203 (87.68%), Query Frame = 2 
Query:   17 EGKSIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVAGPGDKPMIVVTYKGEEKQFAPEEISSMVLTKMKEIAEAYLGQALKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRSGEKNVLIFDLGG 625
            +G ++GIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGRRF D  VQSDM+HWPF VV   G +P + V YKGE K F PEE+SSMVLTKMKEIAEAYLG+ + NAVVTVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYGLDKK     E+NVLIFDLGG
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAG-RPKVQVEYKGEAKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKV--GAERNVLIFDLGG 202
[Close]
BLAST of CB417434 vs. ExPASy Swiss-Prot
Match: HSP7C_BOVIN (Heat shock cognate 71 kDa protein OS=Bos taurus GN=HSPA8 PE=1 SV=2)

HSP 1 Score: 322.013 bits (824), Expect = 1.528e-87
Identity = 164/203 (80.79%), Postives = 178/203 (87.68%), Query Frame = 2 
Query:   17 EGKSIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVAGPGDKPMIVVTYKGEEKQFAPEEISSMVLTKMKEIAEAYLGQALKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRSGEKNVLIFDLGG 625
            +G ++GIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGRRF D  VQSDM+HWPF VV   G +P + V YKGE K F PEE+SSMVLTKMKEIAEAYLG+ + NAVVTVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYGLDKK     E+NVLIFDLGG
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAG-RPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKV--GAERNVLIFDLGG 202
[Close]
BLAST of CB417434 vs. ExPASy Swiss-Prot
Match: HSP76_PIG (Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 1.528e-87
Identity = 158/200 (79.00%), Postives = 186/200 (93.00%), Query Frame = 2 
Query:   26 SIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVAGPGDKPMIVVTYKGEEKQFAPEEISSMVLTKMKEIAEAYLGQALKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRSGEKNVLIFDLGG 625
            +IGIDLGTTYSCVGV+Q+ RVEI+ANDQGNRTTPSYVAFTDTERL+GDAAK+Q A+NPQNTVFDAKRLIGR+F+DP+VQSD++HWPF+VV+  G KP + V+Y+GE+K F PEEISSMVL+KMKE AEAYLGQ +++AV+TVPAYFNDSQRQATKDAGAIAGLNV+RIINEPTAAAIAYGLD++   +GE+NVLIFDLGG
Sbjct:    8 AIGIDLGTTYSCVGVFQHGRVEILANDQGNRTTPSYVAFTDTERLVGDAAKSQAALNPQNTVFDAKRLIGRKFADPTVQSDLKHWPFQVVS-EGGKPKVRVSYRGEDKAFYPEEISSMVLSKMKETAEAYLGQPVRHAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDRRG--AGERNVLIFDLGG 204
The following BLAST results are available for this feature:
BLAST of CB417434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_LEIMA8.960e-8881.00Heat shock 70 kDa protein (Fragment) OS=Leishmania... [more]
HSP7D_DROME1.528e-8781.50Heat shock 70 kDa protein cognate 4 OS=Drosophila ... [more]
HSP7C_SAGOE1.528e-8780.79Heat shock cognate 71 kDa protein OS=Saguinus oedi... [more]
HSP7C_RAT1.528e-8780.79Heat shock cognate 71 kDa protein OS=Rattus norveg... [more]
HSP7C_MOUSE1.528e-8780.79Heat shock cognate 71 kDa protein OS=Mus musculus ... [more]
HSP7C_HUMAN1.528e-8780.79Heat shock cognate 71 kDa protein OS=Homo sapiens ... [more]
HSP7C_HORSE1.528e-8780.79Heat shock cognate 71 kDa protein OS=Equus caballu... [more]
HSP7C_CRIGR1.528e-8780.79Heat shock cognate 71 kDa protein OS=Cricetulus gr... [more]
HSP7C_BOVIN1.528e-8780.79Heat shock cognate 71 kDa protein OS=Bos taurus GN... [more]
HSP76_PIG1.528e-8779.00Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6... [more]

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Properties
Property NameValue
Genbank descriptionEST0538 Mature peel (flavedo) cDNA subtraction library Citrus sinensis cDNA clone 6P354 similar to 70 kDa heat shock protein (acc# P09189), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB417434 ID=CB417434; Name=CB417434; organism=Citrus sinensis; type=EST; length=627bp
AATGGCTGGAAAAGTTGAAGGCAAGTCTATTGGCATAGACCTTGGCACGA
CTTACAGCTGCGTTGGAGTATGGCAAAACGACCGCGTAGAGATCATAGCC
AACGATCAAGGCAACAGAACCACTCCATCTTATGTAGCCTTCACAGACAC
CGAACGTCTGATCGGCGATGCGGCTAAAAACCAAGTTGCCATGAACCCTC
AGAACACCGTTTTTGATGCCAAACGACTCATCGGGAGGCGCTTCTCCGAC
CCGTCGGTTCAAAGCGACATGAGGCACTGGCCTTTTAAGGTTGTTGCAGG
CCCTGGTGACAAGCCCATGATTGTTGTTACTTATAAAGGCGAAGAGAAGC
AGTTTGCTCCCGAAGAGATTTCTTCTATGGTGTTGACCAAGATGAAGGAG
ATAGCCGAGGCTTATCTCGGTCAAGCCTTGAAAAATGCTGTGGTTACTGT
TCCAGCTTATTTTAATGACTCTCAGAGGCAAGCAACGAAGGATGCTGGTG
CTATTGCTGGGTTGAATGTTATGAGAATCATCAATGAGCCTACTGCTGCT
GCTATTGCTTATGGCTTGGACAAGAAGGCATCGAGGAGTGGTGAGAAGAA
CGTGCTGATATTCGATCTCGGTGGTGG
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