CB610479

Overview
NameCB610479
Unique NameCB610479
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length621
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610479 vs. ExPASy Swiss-Prot
Match: CIPKB_ORYSJ (CBL-interacting protein kinase 11 OS=Oryza sativa subsp. japonica GN=CIPK11 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.644e-11
Identity = 35/71 (49.30%), Postives = 47/71 (66.20%), Query Frame = 2
Query:   17 KKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYK-NLSTGLKDVVWK-SGDE 223
            KK+N  L+L   K G+KG L +  EIFEV PS  +VEL+K+ GDT+E+ K  K ++   LKD+VW   GDE
Sbjct:  369 KKDNGVLRLAAPKEGKKGFLELDAEIFEVTPSFLLVELKKTNGDTMEYRKLVKEDIRPALKDIVWVWQGDE 439          
BLAST of CB610479 vs. ExPASy Swiss-Prot
Match: CIPK5_ARATH (CBL-interacting serine/threonine-protein kinase 5 OS=Arabidopsis thaliana GN=CIPK5 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.677e-11
Identity = 30/65 (46.15%), Postives = 45/65 (69.23%), Query Frame = 2
Query:   17 KKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFY-KNLSTGLKDVVW 208
            +  +FK+K++G+  GRKG LS+  E+FEVAP + +VE  KS GDTLE+ + Y + +   L D+VW
Sbjct:  367 RTKDFKVKMEGKTEGRKGRLSMTAEVFEVAPEISVVEFCKSAGDTLEYDRLYEEEVRPALNDIVW 431          
BLAST of CB610479 vs. ExPASy Swiss-Prot
Match: CIPK2_ORYSJ (CBL-interacting protein kinase 2 OS=Oryza sativa subsp. japonica GN=CIPK2 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.677e-11
Identity = 31/65 (47.69%), Postives = 45/65 (69.23%), Query Frame = 2
Query:   17 KKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHK-FYKNLSTGLKDVVW 208
            KK+   LK++G K GRKG + +  EIFEV P+ ++VEL+K+ GDTLE+ K   + +   LKD+VW
Sbjct:  364 KKDGGLLKMEGSKPGRKGVMGIDAEIFEVTPNFHLVELKKTNGDTLEYRKVLNQEMRPALKDIVW 428          
The following BLAST results are available for this feature:
BLAST of CB610479 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
CIPKB_ORYSJ6.644e-1149.30CBL-interacting protein kinase 11 OS=Oryza sativa ... [more]
CIPK5_ARATH8.677e-1146.15CBL-interacting serine/threonine-protein kinase 5 ... [more]
CIPK2_ORYSJ8.677e-1147.69CBL-interacting protein kinase 2 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IaF_H09 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IaF_H09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610479 ID=CB610479; Name=CB610479; organism=Citrus sinensis; type=EST; length=621bp
GGGGGGTTTTGATGTGAAGAAAAATAATTTCAAGTTGAAGCTTCAAGGGG
AAAAAACTGGACGCAAGGGTCATTTATCTGTTGCAACAGAGATTTTTGAG
GTGGCCCCTTCACTTTACATGGTTGAGCTTCGAAAATCTGGAGGAGATAC
CTTAGAATTTCACAAGTTTTACAAAAACCTTTCGACTGGGCTGAAAGATG
TTGTTTGGAAATCAGGAGATGAAACAATTGTTGAAGGATCTGCAGTCGCT
GGTGGCGCAGGGTCTCAATAGCGGATTTCCTTTCATGACTTGCACTGCTG
AATATCTCCAGCAAATATATATATTGCTTTTGCACCATTGTATCTCAGCT
TTGTATTTTATCCTCTAGGCCATGTGTTTCCTTCATTTGTGATTCAGAAC
TCACTTCTCGTGTACCTTGGTTTGGCTTTTGTGTGGTTTCAGACTTCCAG
TTGTATCATCTCAACGGATATTGAACGTAGTCAATTACCTGCAAATAATC
AAAAAGACTCTCAGTCCACTGTCATTTTCATTTTGTTTGTTTTTAGTGAC
TTGTCTATGGACCAGAAAATTCAATAAAAATAATATATTACGAAAAAAAA
AAAAAAAAAAAAAAAAAAAAA
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