CB610489

Overview
NameCB610489
Unique NameCB610489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_SYNJA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Synechococcus sp. (strain JA-3-3Ab) GN=gpmI PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.616e-18
Identity = 60/160 (37.50%), Postives = 87/160 (54.37%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGG-----PGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T++  P+M A+E+ ++A +AI  R +  V +N  N DMVGHTG+ +ATV A +  D  +  ++ A+  VGG  L+ ADHGNAE M   ++ G P          T+HT  PVP I + G     PG   DVK R+    G LA+V  T + + G   P +
Sbjct:  361 TYDQMPEMSAVEVTDKAIEAIARREYSLVVLNYANPDMVGHTGNFKATVRALETVDRCLGRLLAAVVDVGGTTLIVADHGNAELM--WDEQGNP---------WTAHTNNPVPCILVEGERRKIPGRGGDVKLRS---GGTLADVGPTLLEILGLPQPPE 506          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_LEGPA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Legionella pneumophila (strain Paris) GN=gpmI PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.616e-18
Identity = 54/154 (35.06%), Postives = 82/154 (53.25%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T+++QP+M A E+ +    AI SR +H +  N  N+DMVGHTG+ EATV A +  D+ ++ +  A++  GG  L+TADHGNAE+M            +   Q  T+HT +PVP    G G      +      G L ++A + + L G   P +
Sbjct:  363 TYDLQPEMSAHELTKTLIAAINSRDYHVIICNYANADMVGHTGNFEATVQAIECLDQCMQQVWQALKNNGGKLLITADHGNAEEM----------FSEATNQAHTAHTSEPVPFLYVGGG------WHFTHSEGSLIDIAPSLLALLGITPPPE 500          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_YERE8 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=gpmI PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.028e-18
Identity = 55/154 (35.71%), Postives = 86/154 (55.84%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T+++QP+M + E+ E+   AI S ++  +  N PN DMVGHTGD +A V A +  D  ++ ++ A++ V G  L+TADHGNAE M +   +G         Q  T+HT  PVP+   G     +VK    +  G L+++A T ++L   E P +
Sbjct:  368 TYDLQPEMSSAELTEKLVGAIASGKYDVIICNYPNGDMVGHTGDYDAAVKAVETLDNCIEQVVAAVQAVDGQLLITADHGNAEQM-RDPATG---------QAHTAHTSLPVPLIYVG---NKEVK---AVEGGKLSDIAPTMLSLMEMEIPQE 505          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_THICR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Thiomicrospira crunogena (strain XCL-2) GN=gpmI PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.028e-18
Identity = 61/156 (39.10%), Postives = 85/156 (54.49%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGGPGLPDDVKFRTDLPNGG-LANVAATFINLHGYEAPSD 470
            T+++QP+M   E+ E+   AI S  +     N+ N DMVGHTGD  A V A +A DEA+  I+  I+ V G  +VTADHGN E M+   ++G+P         LTSHT  PVP +  G  G P        L +GG L +V  T +++ G E P +
Sbjct:  374 TYDLQPEMSLPELKEKLIDAIKSGEYDTFICNIANPDMVGHTGDFNACVQAAEAVDEALGEILATIKAVDGEAIVTADHGNME-MLFNEETGKP---------LTSHTTFPVPFVYFGKKGYP--------LKDGGALCDVIPTLLDMMGIEKPEE 511          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_BACSU (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus subtilis GN=gpmI PE=1 SV=4)

HSP 1 Score: 91.2781 bits (225), Expect = 6.028e-18
Identity = 53/154 (34.42%), Postives = 86/154 (55.84%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T++++P+M A E+ +   K I + +   + +N  N DMVGH+G +E T+ A +A DE +  ++DAI   GG  ++TADHGNA+ ++   +SGEP          T+HT  PVP+ +   G+       T    G L ++A T ++L G E P +
Sbjct:  367 TYDLKPEMSAYEVKDALVKEIEADKHDAIILNFANPDMVGHSGMVEPTIKAIEAVDECLGEVVDAILAKGGHAIITADHGNADILI--TESGEP---------HTAHTTNPVPVIVTKEGI-------TLREGGILGDLAPTLLDLLGVEKPKE 502          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_BACLD (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=gpmI PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.028e-18
Identity = 52/154 (33.77%), Postives = 86/154 (55.84%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T++++P+M A E+ +   K I + + + + +N  N DMVGH+G +E TV A +A DE +  ++DAI   GG  ++TADHGNA+ ++   + G+P          T+HT  PVP+ +   G+       T    G L ++A T ++L G E P +
Sbjct:  367 TYDLKPEMSAYEVKDALVKEIEAEKHNAIILNFANPDMVGHSGKVEPTVKAIEAVDECLGEVVDAILAKGGYAIITADHGNADVLI--TEEGKP---------HTAHTTNPVPVIVTKEGV-------TLREGGILGDLAPTLLDLLGVEKPKE 502          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_RHOS5 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=gpmI PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.873e-18
Identity = 53/155 (34.19%), Postives = 81/155 (52.26%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T++++P+M A ++++   +AI    +  + VN  N DMVGHTGD+ A + AC+  D  +   ++A+ + GG  +VTADHGN E M+     G            T+HT  PVP I +GGP           L  G LA++A T + L G   P +
Sbjct:  361 TYDLKPEMSAPDVSDHLVQAI-GEGYDLIVVNYANPDMVGHTGDLRAAMAACEEVDRGLGRAVEAVRQAGGAMIVTADHGNCETMIDPETGGPH----------TAHTTNPVPVILVGGPA-------GARLRAGRLADLAPTLLELMGLPQPEE 497          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_LEGPC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Legionella pneumophila (strain Corby) GN=gpmI PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.873e-18
Identity = 54/154 (35.06%), Postives = 81/154 (52.60%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T+++QP+M A E+ +    AI SR +H +  N  N+DMVGHTG+ EATV A +  D+ +  +  A++  GG  L+TADHGNAE+M            +   Q  T+HT +PVP    G G      +      G L ++A + + L G   P +
Sbjct:  363 TYDLQPEMSAPELTKTLIAAINSRDYHVIICNYANADMVGHTGNFEATVQAIECLDQCMHQVWQALKNNGGKLLITADHGNAEEM----------FSEATNQAHTAHTSEPVPFLYVGGG------WHFTHAEGSLIDIAPSLLALLGITPPPE 500          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_METBU (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Methanococcoides burtonii (strain DSM 6242) GN=gpmI PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.028e-17
Identity = 57/154 (37.01%), Postives = 86/154 (55.84%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T++++P+M A E+ E   + I S ++  + +NL N DMVGH+G +EA V A +  D+ V  II AI++VGG  +V ADHGNAE MV+   + E        Q  T+HT  PV        +    + R +L  G L++VA T + + G E P +
Sbjct:  368 TYDLKPEMSAYEVTEELIERIGSGKYDVIVLNLANMDMVGHSGIMEAAVKAVEVVDDCVGKIITAIKEVGGEAMVMADHGNAEKMVEFCNNTER-------QCYTAHTSNPVRC------IYVTQEKRVELQKGRLSDVAPTILKIMGIEKPPE 508          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_COLP3 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=gpmI PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.028e-17
Identity = 53/160 (33.12%), Postives = 89/160 (55.62%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSLI 488
            T+++QP+M +  + ++   AI S ++  +  N PN DMVGHTG  +A V AC+A D  V  ++ A +  GG  L+TADHGNAE M       +P+    + Q  T+HT +PVP+   G       +  +   +G L++++ + ++L G E P +   S++
Sbjct:  373 TYDLQPEMNSTLLTDKLVGAIESGKYDFIVCNYPNGDMVGHTGSFDAAVKACEAVDTCVGRVVKAAQDNGGECLITADHGNAEQM------QDPV----SGQAHTAHTCEPVPLIYVG-------RNASPAASGTLSDISPSVLHLMGMEQPQEMTGSVL 515          
The following BLAST results are available for this feature:
BLAST of CB610489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 266
Match NameE-valueIdentityDescription
GPMI_SYNJA4.616e-1837.502,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LEGPA4.616e-1835.062,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_YERE86.028e-1835.712,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_THICR6.028e-1839.102,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACSU6.028e-1834.422,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACLD6.028e-1833.772,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_RHOS57.873e-1834.192,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LEGPC7.873e-1835.062,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_METBU1.028e-1737.012,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_COLP31.028e-1733.132,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IaF_F07 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IaF_F07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610489 ID=CB610489; Name=CB610489; organism=Citrus sinensis; type=EST; length=744bp
GGGGAATTACTTTCAATGTACAGCCCAAGATGAAGGCTTTGGAGATTGCT
GAAAGGGCAAAGAAGGCCATCCTTAGTCGCAGGTTCCACCAGGTGCGTGT
TAACCTACCAAATAGTGACATGGTGGGGCACACGGGAGATATTGAGGCAA
CAGTGGTGGCATGCAAGGCTGCTGATGAAGCTGTCAAGATAATCATTGAT
GCAATAGAGAAAGTTGGTGGAATATATCTTGTTACTGCAGATCATGGCAA
TGCTGAGGACATGGTCAAGAGGAACAAATCTGGGGAGCCTCTTCTTAAGG
ATGGCAATATTCAAGTGCTCACGTCTCACACTCTTAAACCCGTTCCCATT
GCAATCGGAGGTCCTGGACTGCCAGATGATGTCAAGTTCCGCACAGATCT
CCCTAATGGTGGGCTGGCCAATGTAGCAGCAACTTTTATCAATCTCCATG
GATATGAGGCGCCTAGTGACTACGAGCCAAGTCTTATTGAAGTAACTGAC
GACTGAGAGGTAACTGACGACTGGGCGAACAATGGATCGTCGCCTAGATT
TTATAACTCCGGAGGAATTCCGTTAAAACGTAAAACAATAAATTGAATTT
TGGGGTCTTGAATTCGATTTGATACGCGTGCTGTTTTTCAGCTTACATTT
CGATTGCTGTCTGTTGGAGGCAGACAGAACAATATGGCTCAAAATTTATT
TTAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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