CB610489

Overview
NameCB610489
Unique NameCB610489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_BACA2 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus amyloliquefaciens (strain FZB42) GN=gpmI PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.028e-17
Identity = 52/154 (33.77%), Postives = 86/154 (55.84%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T++++P+M A E+ +   K I + +   + +N  N DMVGH+G +E T+ A +A DE +  ++DAI   GG  ++TADHGNA+ ++   ++GEP          T+HT  PVP+ +   G+       T    G L ++A T ++L G E P +
Sbjct:  367 TYDLKPEMSAYEVKDALVKEIAADKHDAIILNFANPDMVGHSGMVEPTIKAIEAVDECLGEVVDAIIAKGGHAIITADHGNADILI--TETGEP---------HTAHTTNPVPVIVTKEGV-------TLREGGILGDLAPTLLDLLGVEKPKE 502          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_LEGPL (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Legionella pneumophila (strain Lens) GN=gpmI PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.343e-17
Identity = 53/154 (34.42%), Postives = 82/154 (53.25%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T+++QP+M A E+ +    AI S+ +H +  N  N+DMVGHTG+ EATV A +  D+ ++ +  A++  GG  L+TADHGNAE+M            +   Q  T+HT +PVP    G G      +      G L ++A + + L G   P +
Sbjct:  363 TYDLQPEMSAHELTKTLIAAINSQDYHVIICNYANADMVGHTGNFEATVQAIECLDQCMQQVWQALKNNGGKLLITADHGNAEEM----------FSEATNQAHTAHTSEPVPFLYVGGG------WHFTHSEGSLIDIAPSLLALLGITPPPE 500          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_LEGPH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=gpmI PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.343e-17
Identity = 53/154 (34.42%), Postives = 82/154 (53.25%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T+++QP+M A E+ +    AI S+ +H +  N  N+DMVGHTG+ EATV A +  D+ ++ +  A++  GG  L+TADHGNAE+M            +   Q  T+HT +PVP    G G      +      G L ++A + + L G   P +
Sbjct:  363 TYDLQPEMSAHELTKTLIAAINSQDYHVIICNYANADMVGHTGNFEATVQAIECLDQCMQQVWQALKNNGGKLLITADHGNAEEM----------FSEATNQAHTAHTSEPVPFLYVGGG------WHFTHSEGSLIDIAPSLLALLGITPPPE 500          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_DINSH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Dinoroseobacter shibae (strain DFL 12) GN=gpmI PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.343e-17
Identity = 57/147 (38.78%), Postives = 78/147 (53.06%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGGPGLPDDVKFRTDLPNGGLANVAATFINL 446
            T+++QP+M A E+++    AI    +  + VN  N DMVGHTGD+EA   AC A D  +   + A+E  GG  +VTADHGN E M+     G            T+HTL PVP I +GGP           L  G LA++A T ++L
Sbjct:  361 TYDLQPEMSAEEVSDSFVAAI-EAGYDLIVVNYANPDMVGHTGDLEAAKAACTAVDTGLGRALAALEVAGGAMIVTADHGNCETMIDPETGG----------THTAHTLNPVPVILVGGPE-------GATLAPGRLADLAPTILHL 489          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_VESOH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=gpmI PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.754e-17
Identity = 51/154 (33.12%), Postives = 84/154 (54.55%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T+++QP+M A E+ +   + I S+++  +  N  N+DMVGH+G ++AT+ A +A D  + II  A+  +GG  L+TADHGNAE M+    +          +V T+HT  PVP+        D +K       G L+++A T + +   E P +
Sbjct:  363 TYDLQPEMSAFELTDALVENIESQKYDLIICNFANTDMVGHSGKLDATIKAVEAVDTCLGIIYKAMFAIGGEMLITADHGNAEQMINPQTN----------EVHTAHTNNPVPLIFVSNRKADIMK----PGKGALSDIAPTLLAMMDIEKPDE 502          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_METFK (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=gpmI PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.754e-17
Identity = 45/120 (37.50%), Postives = 72/120 (60.00%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPG 368
            T+++QP+M A E+ +R + AILSR++  +  N  N DMVGH+GD+ A++ A +  D  +  I+ A+E +GG  ++TADHGN E M +  ++ +P  +    QV      KP  +A  G G
Sbjct:  367 TYDLQPEMSAYEVTDRLEAAILSRKYDAIICNYANCDMVGHSGDLSASIKAVETIDTCIARIVKAMESIGGQMIITADHGNVEQM-RDYENNQPHTQHTTNQVPLFFIGKPATLAAPGTG 485          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_MYCCT (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) GN=gpmI PE=3 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.291e-17
Identity = 57/157 (36.31%), Postives = 86/157 (54.78%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDA-IEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYE 476
            T++++P+M A+EI ++  + I    F  + +N  N DMVGHTG+ +AT +ACK  D+ +K I D  + K  GI ++TADHGNAE M+           D + QV   HT   VPI I       ++K + + P   +A VA T ++L   E P + E
Sbjct:  384 TYDLKPQMSAVEITDKLLEEIKKDEFDFIVLNFANCDMVGHTGNNKATEIACKTLDDQLKRIHDEFVLKHNGIMVITADHGNAEIMI-----------DKDDQVNKKHTTSLVPIII----TDKNIKLKQNDP--AIAKVAPTILDLMNIEIPKEME 523          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_ACIBL (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Acidobacteria bacterium (strain Ellin345) GN=gpmI PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.291e-17
Identity = 51/155 (32.90%), Postives = 80/155 (51.61%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDL-PNGGLANVAATFINLHGYEAPSD 470
            T++++P+M A  IA+  + A+    F  + VN  N+DMVGH+G I  T+ A +  D  +  + + + K GG  L+TADHGNAE M+     G            T+HT  PVP       + +D K R  L P+G L +++ T + + G   P +
Sbjct:  384 TYDLKPEMSANGIADVIEHAVEKGAFDVIVVNFANADMVGHSGKIPPTITAVETVDSCLGRVYNVVRKKGGAMLITADHGNAEQMIDPETGGPQ----------TAHTTNPVPFIF----VAEDAKKRFSLRPDGALQDISPTMMGILGIPQPKE 524          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_YERPS (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Yersinia pseudotuberculosis GN=gpmI PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.992e-17
Identity = 53/154 (34.42%), Postives = 83/154 (53.90%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T+++QP+M + E+ E+   AI S ++  +  N PN DMVGHTGD +A V A +  D  ++ ++ A++   G  L+TADHGNAE M +   +G         Q  T+HT  PVP+   G       K    +  G L+++A T ++L   E P +
Sbjct:  368 TYDLQPEMSSAELTEKLVSAIGSGKYDVIICNYPNGDMVGHTGDYDAAVKAVETLDNCIEQVVAAVKAADGQLLITADHGNAEQM-RDPATG---------QAHTAHTSLPVPLIYVGN------KAVKAVEGGKLSDIAPTMLSLMEMEIPQE 505          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_YERPP (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Yersinia pestis (strain Pestoides F) GN=gpmI PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.992e-17
Identity = 53/154 (34.42%), Postives = 83/154 (53.90%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T+++QP+M + E+ E+   AI S ++  +  N PN DMVGHTGD +A V A +  D  ++ ++ A++   G  L+TADHGNAE M +   +G         Q  T+HT  PVP+   G       K    +  G L+++A T ++L   E P +
Sbjct:  368 TYDLQPEMSSAELTEKLVSAIGSGKYDVIICNYPNGDMVGHTGDYDAAVKAVETLDNCIEQVVAAVKAADGQLLITADHGNAEQM-RDPATG---------QAHTAHTSLPVPLIYVGN------KAVKAVEGGKLSDIAPTMLSLMEMEIPQE 505          
The following BLAST results are available for this feature:
BLAST of CB610489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 266
Match NameE-valueIdentityDescription
GPMI_BACA21.028e-1733.772,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LEGPL1.343e-1734.422,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LEGPH1.343e-1734.422,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_DINSH1.343e-1738.782,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VESOH1.754e-1733.122,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_METFK1.754e-1737.502,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_MYCCT2.291e-1736.312,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ACIBL2.291e-1732.902,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_YERPS2.992e-1734.422,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_YERPP2.992e-1734.422,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IaF_F07 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IaF_F07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610489 ID=CB610489; Name=CB610489; organism=Citrus sinensis; type=EST; length=744bp
GGGGAATTACTTTCAATGTACAGCCCAAGATGAAGGCTTTGGAGATTGCT
GAAAGGGCAAAGAAGGCCATCCTTAGTCGCAGGTTCCACCAGGTGCGTGT
TAACCTACCAAATAGTGACATGGTGGGGCACACGGGAGATATTGAGGCAA
CAGTGGTGGCATGCAAGGCTGCTGATGAAGCTGTCAAGATAATCATTGAT
GCAATAGAGAAAGTTGGTGGAATATATCTTGTTACTGCAGATCATGGCAA
TGCTGAGGACATGGTCAAGAGGAACAAATCTGGGGAGCCTCTTCTTAAGG
ATGGCAATATTCAAGTGCTCACGTCTCACACTCTTAAACCCGTTCCCATT
GCAATCGGAGGTCCTGGACTGCCAGATGATGTCAAGTTCCGCACAGATCT
CCCTAATGGTGGGCTGGCCAATGTAGCAGCAACTTTTATCAATCTCCATG
GATATGAGGCGCCTAGTGACTACGAGCCAAGTCTTATTGAAGTAACTGAC
GACTGAGAGGTAACTGACGACTGGGCGAACAATGGATCGTCGCCTAGATT
TTATAACTCCGGAGGAATTCCGTTAAAACGTAAAACAATAAATTGAATTT
TGGGGTCTTGAATTCGATTTGATACGCGTGCTGTTTTTCAGCTTACATTT
CGATTGCTGTCTGTTGGAGGCAGACAGAACAATATGGCTCAAAATTTATT
TTAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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