CB610489

Overview
NameCB610489
Unique NameCB610489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_PSEAB (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=gpmI PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.608e-21
Identity = 60/155 (38.71%), Postives = 86/155 (55.48%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGG-LANVAATFINLHGYEAPSD 470
            T+++QP+M A E+ +R  +AI  +R+  + VN  N DMVGHTG  EA V A +  D  +  I++A++KVGG  L+TADHGN E M   +            Q  T+HT +PVP    G       K +  +  GG LA+VA T + L G E P++
Sbjct:  368 TYDLQPEMSAPEVTDRIVEAIEQQRYDVIVVNYANGDMVGHTGVFEAAVKAVECLDTCMGRIVEALDKVGGEALITADHGNVEQMEDESTG----------QAHTAHTCEPVPFVYVG-------KRKLSIREGGVLADVAPTMLTLMGLEQPAE 505          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_PSEA7 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas aeruginosa (strain PA7) GN=gpmI PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.608e-21
Identity = 60/155 (38.71%), Postives = 86/155 (55.48%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGG-LANVAATFINLHGYEAPSD 470
            T+++QP+M A E+ +R  +AI  +R+  + VN  N DMVGHTG  EA V A +  D  +  I++A++KVGG  L+TADHGN E M   +            Q  T+HT +PVP    G       K +  +  GG LA+VA T + L G E P++
Sbjct:  368 TYDLQPEMSAPEVTDRIVEAIEQQRYDVIVVNYANGDMVGHTGVFEAAVKAVECLDTCMGRIVEALDKVGGEALITADHGNVEQMEDESTG----------QAHTAHTCEPVPFVYVG-------KRKLSIREGGVLADVAPTMLTLMGLEQPAE 505          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_PSEE4 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas entomophila (strain L48) GN=gpmI PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.937e-21
Identity = 63/155 (40.65%), Postives = 85/155 (54.84%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGG-LANVAATFINLHGYEAPSD 470
            T+++QP+M A E+ +R  +AI  +RF  + VN  N DMVGHTG  EA V A +A D  V  I++A+ KVGG  L+TADHGN E M                Q  T+HT +PVP    G       K +  +  GG LA+VA T + L G E P++
Sbjct:  364 TYDLQPEMNAPEVTDRIVEAIEQQRFDVIVVNYANGDMVGHTGVFEAAVKAVEALDSCVGRIVEALGKVGGEALITADHGNVEQMEDECTG----------QAHTAHTSEPVPFIYVG-------KRKVTVREGGVLADVAPTMLKLLGLEKPAE 501          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_SHEAM (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=gpmI PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.298e-20
Identity = 57/154 (37.01%), Postives = 89/154 (57.79%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T+++QP+M + E+ ++  +AI S ++  +  N PN DMVGHTG+ +A V AC+A D  +  ++DA+ KVGG  L+TADHGNAE M  R+ S          Q  T+HT + VP    G       +  +    G L+++A T +NL G + P++
Sbjct:  366 TYDLQPEMSSTELTDKLVEAIESAKYDVIICNYPNGDMVGHTGNFDAAVKACEAVDTCIGRVVDALAKVGGECLITADHGNAEQM--RDPS--------TGQAHTAHTSELVPFIYVG-------RDASIAEGGRLSDIAPTMLNLMGQDIPAE 502          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_PHOPR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Photobacterium profundum GN=gpmI PE=3 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.298e-20
Identity = 59/154 (38.31%), Postives = 84/154 (54.55%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T+++QP+M A E+ E+   AI    F  +  N PN DMVGHTG  +A V AC+A D  +  +++AI+ VGG  L+TADHGNAE M+     G          V T+HT  PVP+   G       K  T    G L+++A T ++L   E P++
Sbjct:  366 TYDLQPEMSAPELTEKLVAAIKGGEFDTIICNYPNGDMVGHTGVYDAAVKACEALDGCIGQVVEAIKSVGGQLLITADHGNAEMMINPETGG----------VHTAHTNLPVPLIYVGD------KSLTLKDGGKLSDLAPTMLSLSDIEIPAE 503          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_VIBVY (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio vulnificus (strain YJ016) GN=gpmI PE=3 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.695e-20
Identity = 59/154 (38.31%), Postives = 90/154 (58.44%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T+++QP+M + E+ E+   AI S ++  +  N PN+DMVGHTG  EA   A +A D +V  +++AI++VGG  L+TADHGNAE MV     G          + T+HT  PVP+   G      V+F+     G L+++A T ++L G E P++
Sbjct:  365 TYDLQPEMSSTELTEKMVAAIKSGKYDTIICNYPNADMVGHTGVYEAAEKAIEALDASVGQVVEAIKEVGGQLLITADHGNAEMMVDPETGG----------IHTAHTSLPVPLIYVG---DKAVEFK---EGGKLSDLAPTMLSLAGLEIPAE 502          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_VIBVU (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio vulnificus GN=gpmI PE=3 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.695e-20
Identity = 59/154 (38.31%), Postives = 90/154 (58.44%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T+++QP+M + E+ E+   AI S ++  +  N PN+DMVGHTG  EA   A +A D +V  +++AI++VGG  L+TADHGNAE MV     G          + T+HT  PVP+   G      V+F+     G L+++A T ++L G E P++
Sbjct:  365 TYDLQPEMSSTELTEKMVAAIKSGKYDTIICNYPNADMVGHTGVYEAAEKAIEALDASVGQVVEAIKEVGGQLLITADHGNAEMMVDPETGG----------IHTAHTSLPVPLIYVG---DKAVEFK---EGGKLSDLAPTMLSLAGLEIPAE 502          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_SHELP (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=gpmI PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.695e-20
Identity = 57/155 (36.77%), Postives = 86/155 (55.48%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T+++QP+M + E+ ++  +AI S ++  +  N PN DMVGHTG+ +A V AC+A D  +  +++A+ KV G  L+TADHGNAE M                Q  T+HT + VP I +G  G           PNG L+++A T + L G   PS+
Sbjct:  367 TYDLQPEMSSTELTDKLVEAIESTQYDVIICNYPNGDMVGHTGNFDAAVKACEAVDACIGRVVEALAKVDGECLITADHGNAEQMTDEQTG----------QAHTAHTSELVPLIYVGRKG--------EIAPNGRLSDLAPTMLTLMGQTVPSE 503          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_SHESH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella sediminis (strain HAW-EB3) GN=gpmI PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.214e-20
Identity = 57/155 (36.77%), Postives = 87/155 (56.13%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T+++QP+M + E+ ++  +AI S ++  +  N PN DMVGHTG  +A V AC+A D  +  ++DA+ KV G  L+TADHGNAE M                Q  T+HT + VP I +G  G  ++        +G L+++A T + L G E PS+
Sbjct:  367 TYDLQPEMSSAELTDKLVEAIESTKYDVIICNYPNGDMVGHTGSFDAAVKACEAVDTCIGRVVDALAKVDGECLITADHGNAEQMTDEQTG----------QAHTAHTSELVPLIYVGRNGSIEN--------DGRLSDLAPTMLTLMGEEVPSE 503          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_IDILO (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Idiomarina loihiensis GN=gpmI PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.214e-20
Identity = 62/155 (40.00%), Postives = 87/155 (56.13%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T+++QP+M + ++ +    AI S+ F  V  N PN DMVGHTG+ +A V AC+A D +V  ++ A+E VGG  L+TADHGNAE M                Q  T+HT + VP I +G P      K R    NG L++VA T ++L G E P +
Sbjct:  364 TYDLQPEMSSEQLTDELVAAIESQAFDVVICNYPNGDMVGHTGNFDAAVKACEAVDHSVGRVVSALEAVGGECLITADHGNAEQMSDATTG----------QAHTAHTNELVPFIYVGRP-----AKAR----NGRLSDVAPTILHLIGMEQPDE 499          
The following BLAST results are available for this feature:
BLAST of CB610489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 266
Match NameE-valueIdentityDescription
GPMI_PSEAB7.608e-2138.712,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEA77.608e-2138.712,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEE49.937e-2140.652,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEAM1.298e-2037.012,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PHOPR1.298e-2038.312,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VIBVY1.695e-2038.312,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VIBVU1.695e-2038.312,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHELP1.695e-2036.772,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHESH2.214e-2036.772,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_IDILO2.214e-2040.002,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IaF_F07 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IaF_F07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610489 ID=CB610489; Name=CB610489; organism=Citrus sinensis; type=EST; length=744bp
GGGGAATTACTTTCAATGTACAGCCCAAGATGAAGGCTTTGGAGATTGCT
GAAAGGGCAAAGAAGGCCATCCTTAGTCGCAGGTTCCACCAGGTGCGTGT
TAACCTACCAAATAGTGACATGGTGGGGCACACGGGAGATATTGAGGCAA
CAGTGGTGGCATGCAAGGCTGCTGATGAAGCTGTCAAGATAATCATTGAT
GCAATAGAGAAAGTTGGTGGAATATATCTTGTTACTGCAGATCATGGCAA
TGCTGAGGACATGGTCAAGAGGAACAAATCTGGGGAGCCTCTTCTTAAGG
ATGGCAATATTCAAGTGCTCACGTCTCACACTCTTAAACCCGTTCCCATT
GCAATCGGAGGTCCTGGACTGCCAGATGATGTCAAGTTCCGCACAGATCT
CCCTAATGGTGGGCTGGCCAATGTAGCAGCAACTTTTATCAATCTCCATG
GATATGAGGCGCCTAGTGACTACGAGCCAAGTCTTATTGAAGTAACTGAC
GACTGAGAGGTAACTGACGACTGGGCGAACAATGGATCGTCGCCTAGATT
TTATAACTCCGGAGGAATTCCGTTAAAACGTAAAACAATAAATTGAATTT
TGGGGTCTTGAATTCGATTTGATACGCGTGCTGTTTTTCAGCTTACATTT
CGATTGCTGTCTGTTGGAGGCAGACAGAACAATATGGCTCAAAATTTATT
TTAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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