CB610489

Overview
NameCB610489
Unique NameCB610489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_MOOTA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Moorella thermoacetica (strain ATCC 39073) GN=gpmI PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.008e-14
Identity = 53/156 (33.97%), Postives = 80/156 (51.28%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSR--RFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T++ +P M A E+ +    A+L R  ++  + +N  N DMVGHTGD+ A + A +  DE +  I+ A+ +     L+TADHGNAE+M  R   GEP          T+HT   VP       L DD      L  G L +VA T +++   + P++
Sbjct:  368 TYDQKPSMSAREVTD----AVLERLDKYDFIVLNFANPDMVGHTGDLAAAIAAVETVDECIGRIVQAMAERRAPLLLTADHGNAEEM--REPDGEP---------HTAHTSNLVPFI-----LVDDRYRGASLREGALEDVAPTVLDILHIQQPAE 503          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_FLAPJ (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=gpmI PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.008e-14
Identity = 51/152 (33.55%), Postives = 78/152 (51.32%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAP 464
            T+++QP+M A E+ E     I       + +N  N DMVGHTG + A + AC+A ++ V+ +I A        +V ADHGN E M+  N  G P          T+HT  PVPI +       D + +T + +G L ++A T ++L G + P
Sbjct:  363 TYDLQPEMSAYELTEALIPEIEKTEADFICLNFANGDMVGHTGIMSAAIKACQAVNKCVEKVITAALAHNYTTIVIADHGNCETMI--NPDGTP---------NTAHTTNPVPIIL------VDKELKT-IHDGVLGDIAPTILDLMGIKKP 496          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_CAMJR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Campylobacter jejuni (strain RM1221) GN=gpmI PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.008e-14
Identity = 50/159 (31.45%), Postives = 81/159 (50.94%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSL 485
            T++ +P+M A E+ +  KK I  +    + VN  N DMVGHTGD  A + A +A D  +  II+  +K    +++T+DHGN E M           +D    +LT+HT   V + +   G+   +K      N GL+N+AA+ + +   E P +   +L
Sbjct:  351 TYDEKPQMSAFEVCDAVKKGI-EKGEDFIVVNFANGDMVGHTGDFNAAIKAVEAVDTCLGEIIECAKKHDYAFIITSDHGNCEAM-----------QDEKGNLLTNHTTFDVFVFVQAKGV-SKIK-----DNMGLSNIAASVLKILDLEIPKEMNEAL 491          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_GEOSL (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Geobacter sulfurreducens GN=gpmI PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.177e-13
Identity = 54/154 (35.06%), Postives = 80/154 (51.95%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T++ +P+M A  + +   K I       V VN  N+DMVGHTG ++A V A +  DE V  +   + + GG  ++TADHGNAE MV  +++G P          T+HT + VP+      L DD +    L  G LA++A T + L G   P +
Sbjct:  365 TYDQKPEMSAPLVTDALLKRIDEGVDDVVVVNFANADMVGHTGILDAAVRAIETVDECVGRVAATVLEKGGALIITADHGNAEMMV--DETGGP---------HTAHTNERVPLI-----LVDDSRKGARLRPGTLADIAPTMLGLLGIPQPPE 502          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_DESVH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=gpmI PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.177e-13
Identity = 49/151 (32.45%), Postives = 77/151 (50.99%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEA 461
            T++++P+M A  + +   +      +     N+ N DMVGHTG I A V AC+  D  V+ I DA+   GG  ++TADHGNAE+++  ++SG P          T+H++  VP  +   G     +  T    G L ++A T + L G  A
Sbjct:  365 TYDLKPEMSAEAVTDTLLEEWAGGGYTLAVCNVANLDMVGHTGVIPAAVRACETVDACVRRIADAVLASGGRLVITADHGNAEELL--DESGNP---------QTAHSMNRVPFTVVEQG-----RVHTFREGGVLGDIAPTILGLWGVPA 499          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_CAMJJ (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=gpmI PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.177e-13
Identity = 49/159 (30.82%), Postives = 81/159 (50.94%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSL 485
            T++ +P+M A E+ +  KK I  +    + VN  N DMVGHTGD  A + A +A D  +  I++  +K    +++T+DHGN E M           +D    +LT+HT   V + +   G+   +K      N GL+N+AA+ + +   E P +   +L
Sbjct:  351 TYDEKPQMSAFEVCDAVKKGI-EKGEDFIVVNFANGDMVGHTGDFNAAIKAVEAVDTCLGEIVECAKKHDYAFIITSDHGNCEAM-----------QDEKGNLLTNHTTFDVFVFVQAKGV-SKIK-----DNMGLSNIAASVLKILDLEIPKEMNEAL 491          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_CAMJD (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=gpmI PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.177e-13
Identity = 49/159 (30.82%), Postives = 81/159 (50.94%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSL 485
            T++ +P+M A E+ +  KK I  +    + VN  N DMVGHTGD  A + A +A D  +  I++  +K    +++T+DHGN E M           +D    +LT+HT   V + +   G+   +K      N GL+N+AA+ + +   E P +   +L
Sbjct:  351 TYDEKPQMSAFEVCDAVKKGI-EKGEDFIVVNFANGDMVGHTGDFNAAIKAVEAVDTCLGEIVECAKKHDYAFIITSDHGNCEAM-----------QDEKGNLLTNHTTFDVFVFVQASGV-SKIK-----ANMGLSNIAASVLKILDLEIPKEMNEAL 491          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_CAMJ8 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=gpmI PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.177e-13
Identity = 49/159 (30.82%), Postives = 81/159 (50.94%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSL 485
            T++ +P+M A E+ +  KK I  +    + VN  N DMVGHTGD  A + A +A D  +  I++  +K    +++T+DHGN E M           +D    +LT+HT   V + +   G+   +K      N GL+N+AA+ + +   E P +   +L
Sbjct:  351 TYDEKPQMSAFEVCDAVKKGI-EKGEDFIVVNFANGDMVGHTGDFNAAIKAVEAVDTCLGEIVECAKKHDYAFIITSDHGNCEAM-----------QDEKGNLLTNHTTFDVFVFVQAKGV-SKIK-----DNMGLSNIAASVLKILDLEIPKEMNEAL 491          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_HELPH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Helicobacter pylori (strain HPAG1) GN=gpmI PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.537e-13
Identity = 51/159 (32.08%), Postives = 80/159 (50.31%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSL 485
            T++++P+M A E+     +  +      + VN  N DMVGHTG+ EA+V A +A D  +  I+   +K+    L+T+DHGN E M           KD N   LT+HT   V   + G G+         + NG L N+A++ + L G +AP+  +  L
Sbjct:  351 TYDLKPEMSAKEVTLAVLEQ-MKLGTDLIIVNFANGDMVGHTGNFEASVKAVEAVDACLGEILSLAKKLDYAMLLTSDHGNCEHM-----------KDENQNPLTNHTAGSVYCFVLGDGV-------RSIKNGALNNIASSVLKLMGLKAPATMDEPL 490          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_HELPY (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Helicobacter pylori GN=gpmI PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13
Identity = 51/159 (32.08%), Postives = 80/159 (50.31%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSDYEPSL 485
            T++++P+M A E+     +  +      + VN  N DMVGHTG+ EA+V A +A D  +  I+   +K+    L+T+DHGN E M           KD N   LT+HT   V   + G G+         + NG L N+A++ + L G +AP+  +  L
Sbjct:  351 TYDLKPEMSAKEVTLAVLEQ-MKLGTDLIIVNFANGDMVGHTGNFEASVKAVEAVDACLGEILSLAKKLDYAMLLTSDHGNCERM-----------KDENQNPLTNHTAGSVYCFVLGDGV-------KSIKNGALNNIASSVLKLMGLKAPATMDEPL 490          
The following BLAST results are available for this feature:
BLAST of CB610489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 266
Match NameE-valueIdentityDescription
GPMI_MOOTA9.008e-1433.972,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_FLAPJ9.008e-1433.552,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CAMJR9.008e-1431.452,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_GEOSL1.177e-1335.062,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_DESVH1.177e-1332.452,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CAMJJ1.177e-1330.822,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CAMJD1.177e-1330.822,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CAMJ81.177e-1330.822,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_HELPH1.537e-1332.082,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_HELPY2.007e-1332.082,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IaF_F07 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IaF_F07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610489 ID=CB610489; Name=CB610489; organism=Citrus sinensis; type=EST; length=744bp
GGGGAATTACTTTCAATGTACAGCCCAAGATGAAGGCTTTGGAGATTGCT
GAAAGGGCAAAGAAGGCCATCCTTAGTCGCAGGTTCCACCAGGTGCGTGT
TAACCTACCAAATAGTGACATGGTGGGGCACACGGGAGATATTGAGGCAA
CAGTGGTGGCATGCAAGGCTGCTGATGAAGCTGTCAAGATAATCATTGAT
GCAATAGAGAAAGTTGGTGGAATATATCTTGTTACTGCAGATCATGGCAA
TGCTGAGGACATGGTCAAGAGGAACAAATCTGGGGAGCCTCTTCTTAAGG
ATGGCAATATTCAAGTGCTCACGTCTCACACTCTTAAACCCGTTCCCATT
GCAATCGGAGGTCCTGGACTGCCAGATGATGTCAAGTTCCGCACAGATCT
CCCTAATGGTGGGCTGGCCAATGTAGCAGCAACTTTTATCAATCTCCATG
GATATGAGGCGCCTAGTGACTACGAGCCAAGTCTTATTGAAGTAACTGAC
GACTGAGAGGTAACTGACGACTGGGCGAACAATGGATCGTCGCCTAGATT
TTATAACTCCGGAGGAATTCCGTTAAAACGTAAAACAATAAATTGAATTT
TGGGGTCTTGAATTCGATTTGATACGCGTGCTGTTTTTCAGCTTACATTT
CGATTGCTGTCTGTTGGAGGCAGACAGAACAATATGGCTCAAAATTTATT
TTAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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