CB610489

Overview
NameCB610489
Unique NameCB610489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI2_METAC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2 OS=Methanosarcina acetivorans GN=gpmI2 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.214e-20
Identity = 60/154 (38.96%), Postives = 88/154 (57.14%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T++++P+M A E+ +   + I S ++  + +N  N DMVGHTG  EA V A +A D  V  II+A++K GG+ L+TADHGNAE M +   +GEP          T+HT  PV     G G   +VK    L NG L+++A T ++L G   P +
Sbjct:  374 TYDLKPEMSAYEVTDEVIRRIQSGKYDVIVLNFANMDMVGHTGIFEAAVQAVEAVDTCVGRIIEALKKAGGVALITADHGNAEQM-ENQHTGEP---------HTAHTSNPVRCIYAGKG---EVK---ALENGKLSDLAPTLLDLLGVPKPEE 511          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_VIBCM (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=gpmI PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.891e-20
Identity = 59/156 (37.82%), Postives = 88/156 (56.41%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGGPGLPDDVKFRTDLPNGG-LANVAATFINLHGYEAPSD 470
            T+++QP+M + E+ ++   AI S ++  +  N PN DMVGHTG  EA V AC+A DE +  +++AI++V G  L+TADHGNAE M+     G          V T+HT  PVP I +G   +         L  GG L+++A T + L   + P+D
Sbjct:  365 TYDLQPEMSSKELTDKLVAAIKSGKYDAIICNYPNGDMVGHTGVYEAAVKACEAVDECIGRVVEAIKEVDGQLLITADHGNAEMMIDPETGG----------VHTAHTSLPVPLIYVGNKAI--------SLKEGGKLSDLAPTMLALSDLDIPAD 502          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_VIBCH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio cholerae GN=gpmI PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.891e-20
Identity = 59/156 (37.82%), Postives = 88/156 (56.41%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGGPGLPDDVKFRTDLPNGG-LANVAATFINLHGYEAPSD 470
            T+++QP+M + E+ ++   AI S ++  +  N PN DMVGHTG  EA V AC+A DE +  +++AI++V G  L+TADHGNAE M+     G          V T+HT  PVP I +G   +         L  GG L+++A T + L   + P+D
Sbjct:  365 TYDLQPEMSSKELTDKLVAAIKSGKYDAIICNYPNGDMVGHTGVYEAAVKACEAVDECIGRVVEAIKEVDGQLLITADHGNAEMMIDPETGG----------VHTAHTSLPVPLIYVGNKAI--------SLKEGGKLSDLAPTMLALSDLDIPAD 502          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_VIBC3 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=gpmI PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.891e-20
Identity = 59/156 (37.82%), Postives = 88/156 (56.41%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGGPGLPDDVKFRTDLPNGG-LANVAATFINLHGYEAPSD 470
            T+++QP+M + E+ ++   AI S ++  +  N PN DMVGHTG  EA V AC+A DE +  +++AI++V G  L+TADHGNAE M+     G          V T+HT  PVP I +G   +         L  GG L+++A T + L   + P+D
Sbjct:  365 TYDLQPEMSSKELTDKLVAAIKSGKYDAIICNYPNGDMVGHTGVYEAAVKACEAVDECIGRVVEAIKEVDGQLLITADHGNAEMMIDPETGG----------VHTAHTSLPVPLIYVGNKAI--------SLKEGGKLSDLAPTMLALSDLDIPAD 502          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_SILPO (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Silicibacter pomeroyi GN=gpmI PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.891e-20
Identity = 57/155 (36.77%), Postives = 87/155 (56.13%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIA-IGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T+++QP+M A E+ ++  +AI    +  +  N  N DMVGHTGD++A + AC+A D+ +  +I A+E+ GG  +VTADHGN E M+     G            T+HTL PVP+A +GGP           L +G L+++A T + L G   P +
Sbjct:  361 TYDMQPEMSAPEVTDKFVEAI-GAGYDLIVTNYANPDMVGHTGDLKAAIKACEAVDQGLSRVIAALEQAGGAMIVTADHGNCEMMIDPETGGPH----------TAHTLNPVPVALVGGPA-------GVTLRDGRLSDLAPTVLALMGLPKPPE 497          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_SHEB9 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella baltica (strain OS195) GN=gpmI PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.891e-20
Identity = 55/154 (35.71%), Postives = 82/154 (53.25%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T+++QP+M + E+ ++   AI S ++  +  N PN DMVGHTG+ +A V AC+A D  +  ++DA+ KVGG  ++TADHGNAE M                Q  T+HT + VP    G     D         G L++VA T + L G   P++
Sbjct:  367 TYDLQPEMSSAELTDKLVAAIESTKYDVIICNYPNGDMVGHTGNFDAAVKACEAVDACIGCVVDALAKVGGECIITADHGNAEQMTDETTG----------QAHTAHTSELVPFVFVGRDATID-------EGGKLSDVAPTILTLIGEAIPAE 503          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_VIBHB (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=gpmI PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.776e-20
Identity = 59/154 (38.31%), Postives = 90/154 (58.44%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T+++QP+M + E+ E+   AI S ++  +  N PN+DMVGHTG  EA   A +A DE+V  +++AI++V G  L+TADHGNAE M+     G          V T+HT  PVP+   G      V+F+     G L+++A T ++L G E P++
Sbjct:  365 TYDMQPEMSSPELTEKMVAAIKSGKYDTIICNYPNADMVGHTGVYEAAEQAIEALDESVGKVVEAIKEVSGQMLITADHGNAEMMIDPETGG----------VHTAHTNLPVPLIYVG---DKAVEFK---EGGKLSDLAPTMLSLAGLEIPAE 502          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_SHESR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella sp. (strain MR-7) GN=gpmI PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.776e-20
Identity = 55/154 (35.71%), Postives = 83/154 (53.90%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T+++QP+M + E+ ++   AI S ++  +  N PN DMVGHTG+ +A V AC+A D  +  ++DA+ KVGG  ++TADHGNAE M                Q  T+HT + VP    G     D         G L++VA T ++L G   P++
Sbjct:  367 TYDLQPEMSSTELTDKLVAAIESAQYDVIICNYPNGDMVGHTGNFDAAVKACEAVDACIGRVVDALAKVGGECIITADHGNAEQMTDETTG----------QAHTAHTSELVPFVFVGRDATID-------EGGKLSDVAPTILHLMGETIPAE 503          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_SHESM (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella sp. (strain MR-4) GN=gpmI PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.776e-20
Identity = 55/154 (35.71%), Postives = 83/154 (53.90%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T+++QP+M + E+ ++   AI S ++  +  N PN DMVGHTG+ +A V AC+A D  +  ++DA+ KVGG  ++TADHGNAE M                Q  T+HT + VP    G     D         G L++VA T ++L G   P++
Sbjct:  367 TYDLQPEMSSTELTDKLVAAIESAQYDVIICNYPNGDMVGHTGNFDAAVKACEAVDACIGRVVDALAKVGGECIITADHGNAEQMTDETTG----------QAHTAHTSELVPFVFVGRDATID-------EGGKLSDVAPTILHLMGETIPAE 503          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_SHESA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella sp. (strain ANA-3) GN=gpmI PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.776e-20
Identity = 55/154 (35.71%), Postives = 83/154 (53.90%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T+++QP+M + E+ ++   AI S ++  +  N PN DMVGHTG+ +A V AC+A D  +  ++DA+ KVGG  ++TADHGNAE M                Q  T+HT + VP    G     D         G L++VA T ++L G   P++
Sbjct:  367 TYDLQPEMSSTELTDKLVAAIESAQYDVIICNYPNGDMVGHTGNFDAAVKACEAVDACIGRVVDALAKVGGECIITADHGNAEQMTDETTG----------QAHTAHTSELVPFVFVGRDATID-------EGGKLSDVAPTILHLMGETIPAE 503          
The following BLAST results are available for this feature:
BLAST of CB610489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 266
Match NameE-valueIdentityDescription
GPMI2_METAC2.214e-2038.962,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VIBCM2.891e-2037.822,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VIBCH2.891e-2037.822,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VIBC32.891e-2037.822,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SILPO2.891e-2036.772,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEB92.891e-2035.712,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VIBHB3.776e-2038.312,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHESR3.776e-2035.712,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHESM3.776e-2035.712,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHESA3.776e-2035.712,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IaF_F07 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IaF_F07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610489 ID=CB610489; Name=CB610489; organism=Citrus sinensis; type=EST; length=744bp
GGGGAATTACTTTCAATGTACAGCCCAAGATGAAGGCTTTGGAGATTGCT
GAAAGGGCAAAGAAGGCCATCCTTAGTCGCAGGTTCCACCAGGTGCGTGT
TAACCTACCAAATAGTGACATGGTGGGGCACACGGGAGATATTGAGGCAA
CAGTGGTGGCATGCAAGGCTGCTGATGAAGCTGTCAAGATAATCATTGAT
GCAATAGAGAAAGTTGGTGGAATATATCTTGTTACTGCAGATCATGGCAA
TGCTGAGGACATGGTCAAGAGGAACAAATCTGGGGAGCCTCTTCTTAAGG
ATGGCAATATTCAAGTGCTCACGTCTCACACTCTTAAACCCGTTCCCATT
GCAATCGGAGGTCCTGGACTGCCAGATGATGTCAAGTTCCGCACAGATCT
CCCTAATGGTGGGCTGGCCAATGTAGCAGCAACTTTTATCAATCTCCATG
GATATGAGGCGCCTAGTGACTACGAGCCAAGTCTTATTGAAGTAACTGAC
GACTGAGAGGTAACTGACGACTGGGCGAACAATGGATCGTCGCCTAGATT
TTATAACTCCGGAGGAATTCCGTTAAAACGTAAAACAATAAATTGAATTT
TGGGGTCTTGAATTCGATTTGATACGCGTGCTGTTTTTCAGCTTACATTT
CGATTGCTGTCTGTTGGAGGCAGACAGAACAATATGGCTCAAAATTTATT
TTAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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