CB610489

Overview
NameCB610489
Unique NameCB610489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12501 contig Csv1_Contig12501:1254..1997. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_AERS4 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Aeromonas salmonicida (strain A449) GN=gpmI PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.453e-19
Identity = 56/154 (36.36%), Postives = 83/154 (53.90%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T+++QP+M + E+ ++   AI S ++  +  N PN DMVGHTG  +A V AC+A D  V  + +A+ +VGG  L+TADHGNAE M          L +   Q  T+HT  PVP+   G       +    L  G L+++A T + L G   P +
Sbjct:  363 TYDLQPEMSSEELTDKLVAAIKSGKYDTIICNYPNGDMVGHTGVFDAAVKACEAVDHCVGRVTEALAEVGGECLITADHGNAEKM----------LDEETGQAHTAHTNLPVPLIYFG-------RKAEVLEGGKLSDLAPTMLTLMGLPVPPE 499          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI2_METBF (2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2 OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=gpmI2 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.453e-19
Identity = 57/154 (37.01%), Postives = 87/154 (56.49%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T++++P+M A EI +   + I S ++  + +N  N DMVGHTG  EA V A +A D+ +  I++ +++ GG+ L+TADHGNAE+M+   K+GEP          T+HT  PV     G     ++K    L NG L +VA T + L G   P +
Sbjct:  378 TYDLKPEMSAYEITDEVIRRIQSGKYDVIVLNFANMDMVGHTGIFEAAVKAVEAVDKCIGRIVEVLKEKGGVALITADHGNAEEMIDL-KTGEP---------HTAHTSNPVKCIYFG---NSEIK---ALRNGKLCDVAPTILELLGIPKPQE 515          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_SHEDO (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=gpmI PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.121e-19
Identity = 54/154 (35.06%), Postives = 84/154 (54.55%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T+++QP+M + E+ ++  +AI S ++  V  N PN DMVGHTG+ +A V AC+A D  +  ++ A+ KV G  L+TADHGNAE M   +            Q  T+HT + VP    G     D   +     G L+++A T ++L G   P++
Sbjct:  367 TYDLQPEMNSTELTDKLVEAIESAKYDVVICNYPNGDMVGHTGNFDAAVKACEAVDACIGRVVAALAKVNGECLITADHGNAEQMTDESTG----------QAHTAHTSELVPFIYVG----RDASIK---DGGRLSDIAPTMLSLMGQPVPAE 503          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_PSEHT (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=gpmI PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.301e-19
Identity = 56/154 (36.36%), Postives = 83/154 (53.90%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T+++QP+M +  + ++   AI S ++  +  N PN DMVGH+G   A V AC+A D  +  ++ A+ K GG  L+TADHGNAE M          LK G  Q  T+HT +PVP    G       +  T      L++VA T ++L G E P++
Sbjct:  368 TYDLQPEMNSEMLTDKLVAAIKSGKYDAIICNYPNGDMVGHSGVFAAAVKACEAVDHCIGRVVAALNKYGGEALITADHGNAEQMAN--------LKTG--QAHTAHTSEPVPFIYVG-------RDATASEGKALSDVAPTMLHLMGMEQPTE 504          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_SYMTH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Symbiobacterium thermophilum GN=gpmI PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.215e-18
Identity = 58/152 (38.16%), Postives = 82/152 (53.95%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAP 464
            T++++P+M A E+A  A K I   R   + +N  N DMVGHTG +EA + A +A DE +  ++DA+   GG  ++ ADHGN + MV   ++G P          T+HTL PVP       L DD +    L  G LANVA T + + G   P
Sbjct:  365 TYDLKPEMSAYEVAREAVKWIEEDRTDFIVLNFANPDMVGHTGVLEAAIRAVEAVDECLGQVVDALLAKGGAAVIIADHGNCDQMVD-YETGAP---------HTNHTLNPVPCI-----LVDDQRLDAKLKPGVLANVAPTLLEIIGLPKP 501          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_SHEFN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella frigidimarina (strain NCIMB 400) GN=gpmI PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.215e-18
Identity = 55/156 (35.26%), Postives = 85/156 (54.49%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKD-GNIQVLTSHTLKPVP-IAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T+++QP+M + E+ ++   AI S ++  +  N PN DMVGH+G+ +A V AC+A D  +  +++A+ KV G  L+TADHGNAE M           KD  N Q  T+HT   VP + +G   +  D         G L+++A T + L G   P +
Sbjct:  366 TYDLQPEMSSTELTDKLVAAIESTKYDVIICNYPNGDMVGHSGNFDAAVKACEAVDACIGRVVEALAKVDGECLITADHGNAEKM-----------KDPSNGQAFTAHTSNLVPFVYVGRDAVIKD--------GGRLSDIAPTMLTLMGQSIPKE 502          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_GEOTN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=gpmI PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.215e-18
Identity = 53/154 (34.42%), Postives = 89/154 (57.79%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T++++P+M A E+ E   K I + ++  + +N  N DMVGH+G +E T+ A +A DE +  ++DAI + GGI ++TADHGNA++++     G+P          T+HT  PVP+ +   G    ++ R D   G L ++A T ++L G   P +
Sbjct:  367 TYDLKPEMSAYEVTEALLKEIAADKYDAIILNYANPDMVGHSGMLEPTIKAVEAVDECLGKVVDAILEKGGIAIITADHGNADEVL--TPEGKP---------QTAHTTNPVPVIVTKHG----IELRKD---GILGDLAPTMLDLLGLPQPKE 502          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_VIBFM (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio fischeri (strain MJ11) GN=gpmI PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.586e-18
Identity = 56/154 (36.36%), Postives = 87/154 (56.49%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T+++QP+M A E+ E+   AI S ++  +  N PN DMVGHTG  +ATV A ++ DE +  +++AI++V G  L+TADHGNAE M+     G          V T+HT  PVP+   G      ++F+     G L+++A T + L     P++
Sbjct:  365 TYDLQPEMSAPELTEKLVAAIKSGKYDAIVCNFPNCDMVGHTGVYDATVKAVESLDECIGKVVEAIKEVDGQLLITADHGNAEMMIDPETGG----------VHTAHTNLPVPLIYVG---SKAIEFK---EGGKLSDLAPTMLALTDTAIPAE 502          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_SILST (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Silicibacter sp. (strain TM1040) GN=gpmI PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.586e-18
Identity = 56/155 (36.13%), Postives = 86/155 (55.48%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIA-IGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T+++QP+M A E+  +  +AI +  +  +  N  N DMVGHTGD++A + AC+A D+ +  ++ A++  GG  +VTADHGN E MV     G            T+HT   VP+A +GGP         T L +G LA++A T + L G + P +
Sbjct:  362 TYDLQPEMSAPEVTAKFVEAIRAG-YDLIVTNYANPDMVGHTGDLDAAIKACEAVDQGLGEVVAALKDAGGAMIVTADHGNCELMVDPETGG----------AHTAHTTNLVPVALVGGPE-------GTALKDGRLADLAPTLLALMGLDQPEE 498          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_HAHCH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Hahella chejuensis (strain KCTC 2396) GN=gpmI PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.586e-18
Identity = 55/154 (35.71%), Postives = 86/154 (55.84%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T++++P+M A E+ ++  +AI S +F  +  N  N DMVGH+G  +A + A +  D+ +K I +A+ +VGG  L+TADHGNAE MV           D N Q  T HT  PVP+   G   P ++  + D   G L ++A + ++L   E P +
Sbjct:  368 TYDLKPEMSAPEVTDKLVEAIKSGKFDLIVCNYANGDMVGHSGVYDAAMKAAECIDQCLKRIAEALNEVGGQCLITADHGNAEQMV-----------DENGQPHTQHTTGPVPLIYIG---PKNISLKED---GRLCDIAPSLLDLMELEKPRE 504          
The following BLAST results are available for this feature:
BLAST of CB610489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 266
Match NameE-valueIdentityDescription
GPMI_AERS45.453e-1936.362,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI2_METBF5.453e-1937.012,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEDO7.121e-1935.062,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEHT9.301e-1936.362,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SYMTH1.215e-1838.162,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEFN1.215e-1835.262,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_GEOTN1.215e-1834.422,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VIBFM1.586e-1836.362,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SILST1.586e-1836.132,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_HAHCH1.586e-1835.712,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IaF_F07 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IaF_F07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610489 ID=CB610489; Name=CB610489; organism=Citrus sinensis; type=EST; length=744bp
GGGGAATTACTTTCAATGTACAGCCCAAGATGAAGGCTTTGGAGATTGCT
GAAAGGGCAAAGAAGGCCATCCTTAGTCGCAGGTTCCACCAGGTGCGTGT
TAACCTACCAAATAGTGACATGGTGGGGCACACGGGAGATATTGAGGCAA
CAGTGGTGGCATGCAAGGCTGCTGATGAAGCTGTCAAGATAATCATTGAT
GCAATAGAGAAAGTTGGTGGAATATATCTTGTTACTGCAGATCATGGCAA
TGCTGAGGACATGGTCAAGAGGAACAAATCTGGGGAGCCTCTTCTTAAGG
ATGGCAATATTCAAGTGCTCACGTCTCACACTCTTAAACCCGTTCCCATT
GCAATCGGAGGTCCTGGACTGCCAGATGATGTCAAGTTCCGCACAGATCT
CCCTAATGGTGGGCTGGCCAATGTAGCAGCAACTTTTATCAATCTCCATG
GATATGAGGCGCCTAGTGACTACGAGCCAAGTCTTATTGAAGTAACTGAC
GACTGAGAGGTAACTGACGACTGGGCGAACAATGGATCGTCGCCTAGATT
TTATAACTCCGGAGGAATTCCGTTAAAACGTAAAACAATAAATTGAATTT
TGGGGTCTTGAATTCGATTTGATACGCGTGCTGTTTTTCAGCTTACATTT
CGATTGCTGTCTGTTGGAGGCAGACAGAACAATATGGCTCAAAATTTATT
TTAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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