CB610489

Overview
NameCB610489
Unique NameCB610489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12501 contig Csv1_Contig12501:1254..1997. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_AKKM8 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=gpmI PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.586e-18
Identity = 57/154 (37.01%), Postives = 91/154 (59.09%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T++++P+M A E+A++   A+   ++  V +N  N DMVGHTG +EA + AC+A D A++  +  + ++GG  L+TADHGNAE M  RN+ G P          T+HT   V +      + DD K +  L +G LA+VA T ++L G + P++
Sbjct:  368 TYDLKPQMSAAEVADKFVDAV--NKYDVVIMNFANGDMVGHTGFVEAGIAACEAVDSALEKCVKKVLELGGKLLITADHGNAEHM--RNEDGSP---------NTAHTTNLVDLIY----VADD-KDQVTLSDGILADVAPTLLSLMGLKQPAE 503          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_GLOVI (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Gloeobacter violaceus GN=gpmI PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.072e-18
Identity = 55/160 (34.38%), Postives = 87/160 (54.37%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPI------AIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T++++P+M A E+ + A  AI +R++  + +N  N DMVGHTG+ +ATV A +  D  +  +++A  + GG  L+TADHGNAE M   ++ G P          T+HT  PVP        +  PG   DV+ R     G L ++A T + + G   P++
Sbjct:  366 TYDLKPEMAAREVTDHAVAAIETRQYSLIVINYANPDMVGHTGNFDATVKAVETVDACIGRLVEACVRAGGTMLLTADHGNAELM--WDEQGNP---------WTAHTTNPVPFILIESEGLKIPGWGTDVQLRA---GGSLGDIAPTILEILGLPQPAE 511          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_GEOKA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Geobacillus kaustophilus GN=gpmI PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.072e-18
Identity = 55/154 (35.71%), Postives = 86/154 (55.84%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T++++P+M A E+ +   K I + ++  + +N  N DMVGH+G +E T+ A +A DE +  ++DAI   GGI ++TADHGNA+         E L  DG  Q  T+HT  PVP+ +   G    +K R     G L ++A T ++L G   P +
Sbjct:  367 TYDLKPEMSAYEVTDALLKEIEADKYDAIILNYANPDMVGHSGKLEPTIKAVEAVDECLGKVVDAILAKGGIAIITADHGNAD---------EVLTPDGKPQ--TAHTTNPVPVIVTKKG----IKLR---DGGILGDLAPTMLDLLGLPQPKE 502          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_ENTS8 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=gpmI PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.072e-18
Identity = 56/154 (36.36%), Postives = 82/154 (53.25%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T+++QP+M + E+ E+   AI S ++  +  N PN DMVGHTG  +A V A +A D  +  +  A+E  GG  L+TADHGNAE M +   +G         Q  T+HT  PVP+   G       K    +  G L+++A T + L G E P +
Sbjct:  368 TYDLQPEMSSAELTEKLVGAINSGKYDAIICNYPNGDMVGHTGVFDAAVAAVEALDNCIAQVTRAVEAAGGQMLITADHGNAEQM-RDPATG---------QAHTAHTNLPVPLIYVGD------KAVKAVDGGKLSDIAPTLLTLMGMEIPQE 505          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_BACST (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus stearothermophilus GN=gpmI PE=1 SV=3)

HSP 1 Score: 92.8189 bits (229), Expect = 2.072e-18
Identity = 55/154 (35.71%), Postives = 86/154 (55.84%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T++++P+M A E+ +   K I + ++  + +N  N DMVGH+G +E T+ A +A DE +  ++DAI   GGI ++TADHGNA+         E L  DG  Q  T+HT  PVP+ +   G    +K R     G L ++A T ++L G   P +
Sbjct:  367 TYDLKPEMSAYEVTDALLKEIEADKYDAIILNYANPDMVGHSGKLEPTIKAVEAVDECLGKVVDAILAKGGIAIITADHGNAD---------EVLTPDGKPQ--TAHTTNPVPVIVTKKG----IKLR---DGGILGDLAPTMLDLLGLPQPKE 502          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_PSEMY (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas mendocina (strain ymp) GN=gpmI PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.706e-18
Identity = 59/155 (38.06%), Postives = 82/155 (52.90%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGG-LANVAATFINLHGYEAPSD 470
            T++++P+M A E+ +R   AI ++R+  + VN  N DMVGHTG  EA V A +  D  V  I +A++KVGG  L+TADHGN E M                Q  T+HT +PVP    G       K    +  GG LA+VA T + L G   P++
Sbjct:  363 TYDLKPEMSAPEVTDRIVDAIENQRYDVIIVNYANGDMVGHTGVFEAAVKAVETLDTCVGRITEALQKVGGEALITADHGNVEQMEDECTG----------QAHTAHTCEPVPFIYVG-------KRPARIREGGVLADVAPTLLTLMGLPQPAE 500          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_LAWIP (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=gpmI PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.706e-18
Identity = 52/154 (33.77%), Postives = 90/154 (58.44%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T++++P+M  +E+ +R   A  S++F  +  NL N DMVGHTG+I+A++ A +A D  V  I  A+ +  G +++TADHGN E+M+  +KSG+P          T+H+  PVP+     G P ++K      +G L ++A T +++     P++
Sbjct:  363 TYDLKPEMSVMEVTDRLLTAWNSKKFSLIVCNLANPDMVGHTGNIKASISALEAVDNCVGRIEKAVAEQHGCFILTADHGNVEEML--DKSGQP---------QTAHSCNPVPLIAIYDGKPLNLK-----ESGKLGDIAPTILSIWDVSIPNE 500          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_SERP5 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Serratia proteamaculans (strain 568) GN=gpmI PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.534e-18
Identity = 56/155 (36.13%), Postives = 85/155 (54.84%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T+++QP+M A E+ ++   AI S ++  +  N PN DMVGHTG  +A V A +  D  +  +++A++ V G  L+TADHGNAE M +   +G         Q  T+HT  PVP I IG P         + +  G L+++A T + L G E P +
Sbjct:  368 TYDLQPEMSAAELTDKLLAAIASGKYDAIICNYPNGDMVGHTGVYDAAVKAVETLDNCIAQVVEAVKAVDGQLLITADHGNAEQM-RDPATG---------QAHTAHTSLPVPLIYIGKPA--------SAVNGGKLSDIAPTMLALMGMEIPQE 504          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_RHOPA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Rhodopseudomonas palustris GN=gpmI PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.534e-18
Identity = 55/154 (35.71%), Postives = 85/154 (55.19%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T+++QP+M A E+ ++A  AI S ++  + +N  N DMVGHTG + A + A +  D  +  I+ AI K GG  LVTADHGN E M++  ++G P          T+HT  PVP+ + G   P        L +G L+++A T + L     P++
Sbjct:  361 TYDLQPEMSAPELGDKAVAAIESGKYDLIVLNFANPDMVGHTGSLPAAIKAVETVDTQLGHIVAAIRKAGGALLVTADHGNCE-MMRDPETGGP---------HTAHTTNPVPVLLVGDNGP--------LADGQLSDLAPTLLKLMELPQPAE 496          
BLAST of CB610489 vs. ExPASy Swiss-Prot
Match: GPMI_VIBF1 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=gpmI PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.616e-18
Identity = 56/154 (36.36%), Postives = 86/154 (55.84%), Query Frame = 3
Query:    9 TFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINLHGYEAPSD 470
            T+++QP+M A E+ E+   AI S ++  +  N PN DMVGHTG  +A V A ++ DE +  +++AI++V G  L+TADHGNAE M+     G          V T+HT  PVP+   G      V+F+     G L+++A T + L     P++
Sbjct:  365 TYDLQPEMSAPELTEKLVAAIKSGKYDAIVCNFPNCDMVGHTGVYDAAVKAVESLDECIGKVVEAIKEVDGQLLITADHGNAEMMIDPETGG----------VHTAHTNLPVPLIYVG---SKAVEFK---EGGKLSDLAPTMLALTDTAIPAE 502          
The following BLAST results are available for this feature:
BLAST of CB610489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 266
Match NameE-valueIdentityDescription
GPMI_AKKM81.586e-1837.012,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_GLOVI2.072e-1834.382,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_GEOKA2.072e-1835.712,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ENTS82.072e-1836.362,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACST2.072e-1835.712,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEMY2.706e-1838.062,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LAWIP2.706e-1833.772,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SERP53.534e-1836.132,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_RHOPA3.534e-1835.712,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VIBF14.616e-1836.362,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IaF_F07 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IaF_F07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610489 ID=CB610489; Name=CB610489; organism=Citrus sinensis; type=EST; length=744bp
GGGGAATTACTTTCAATGTACAGCCCAAGATGAAGGCTTTGGAGATTGCT
GAAAGGGCAAAGAAGGCCATCCTTAGTCGCAGGTTCCACCAGGTGCGTGT
TAACCTACCAAATAGTGACATGGTGGGGCACACGGGAGATATTGAGGCAA
CAGTGGTGGCATGCAAGGCTGCTGATGAAGCTGTCAAGATAATCATTGAT
GCAATAGAGAAAGTTGGTGGAATATATCTTGTTACTGCAGATCATGGCAA
TGCTGAGGACATGGTCAAGAGGAACAAATCTGGGGAGCCTCTTCTTAAGG
ATGGCAATATTCAAGTGCTCACGTCTCACACTCTTAAACCCGTTCCCATT
GCAATCGGAGGTCCTGGACTGCCAGATGATGTCAAGTTCCGCACAGATCT
CCCTAATGGTGGGCTGGCCAATGTAGCAGCAACTTTTATCAATCTCCATG
GATATGAGGCGCCTAGTGACTACGAGCCAAGTCTTATTGAAGTAACTGAC
GACTGAGAGGTAACTGACGACTGGGCGAACAATGGATCGTCGCCTAGATT
TTATAACTCCGGAGGAATTCCGTTAAAACGTAAAACAATAAATTGAATTT
TGGGGTCTTGAATTCGATTTGATACGCGTGCTGTTTTTCAGCTTACATTT
CGATTGCTGTCTGTTGGAGGCAGACAGAACAATATGGCTCAAAATTTATT
TTAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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