CB610579

Overview
NameCB610579
Unique NameCB610579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610579 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.477e-27
Identity = 68/187 (36.36%), Postives = 100/187 (53.48%), Query Frame = 3
Query:  141 DPGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDLTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHRIGRTHCVKLVHRLY 695
            D  L   FY  +CP   +I+++ +    +       S LR  FHDC V  CDAS+LLD T   L+EK+ +  +   R F  ++ IK AVER CP  VSCAD+L ++ +  V   GGP   +  GRRD  ++  ++    LP    ++  + + FA +G+D P  LVAL G H  G+  C  ++ RLY
Sbjct:   27 DAQLTPTFYDTSCPNVSNIVRDIIINELRSDPRITASILRLHFHDCFVNGCDASILLDNTTSFLTEKDALGNANSARGFPTVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDAFAKVGLDRPSDLVALSGGHTFGKNQCRFIMDRLY 213          
BLAST of CB610579 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.107e-26
Identity = 67/184 (36.41%), Postives = 101/184 (54.89%), Query Frame = 3
Query:  150 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDLTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHRIGRTHCVKLVHRLY 695
            L   FY ++CP   +I+++ +    +   + A S LR  FHDC V  CDAS+LLD T    +EK+    +   R F  ++ IK AVER CP  VSCAD+L ++ +  V   GGP   +  GRRD R++  ++    LP  + ++  +   FA +G++ P  LVAL G H  G+  C  ++ RLY
Sbjct:   11 LTPTFYDNSCPNVSNIVRDIIINELRSDPSIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSRQAFLDLANANLPAPSFTLPELKAAFANVGLNRPSDLVALSGGHTFGKNQCRFIMDRLY 194          
BLAST of CB610579 vs. ExPASy Swiss-Prot
Match: PER5_ARATH (Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.446e-26
Identity = 71/200 (35.50%), Postives = 107/200 (53.50%), Query Frame = 3
Query:  102 AVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDLTRKTLSEKEMDRSF-GMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKS-RAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHRIGRTHCVKLVHRLY 695
            ++ L S++ + +  P     FY  +C  A   I+  V+    R +  A S +R  FHDC V  CDAS+LL+ T    SE++   +F  +R F  I+  K  VE+ CPG+VSCADI+ ++ RD    +GGP   +K GRRD   + +A      LP   D++  +   F+  G++   LVAL G+H IG++ C     RLY
Sbjct:   14 SIILTSSICQAQLSP----TFYDQSCRNALSKIRSSVRTAIARERRMAASLIRMHFHDCFVHGCDASILLEGTSTIESERDALPNFKSVRGFEVIDKAKSEVEKVCPGIVSCADIIAVAARDASEYVGGPKWAVKVGRRDSTAAFKALANSGELPGFKDTLDQLSGLFSKKGLNTRDLVALSGAHTIGQSQCFLFRDRLY 209          
BLAST of CB610579 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.446e-26
Identity = 75/215 (34.88%), Postives = 109/215 (50.70%), Query Frame = 3
Query:   63 KAVFLLLALRSFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDLTRKTLSEKEMDRSFGMRN--FRYIENIKEAVER--ECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHRIGRTHCVKLVHRLY 695
            K   LLL L  F A++L SA    +        FY  TCP  E I++  V+   ++   T  + LR  FHDC V  CDAS+++  T    +EK+ + +  +    F  +   KEAV+    C   VSCADIL ++ RD V   GGP   ++ GRRDG  S A  +   LP     ++ +   FA  G+    ++AL G+H +G  HC K+ +RLY
Sbjct:    6 KTNLLLLILSLFLAINLSSAQLRGD--------FYAGTCPNVEQIVRNAVQKKIQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNTNKAEKDHEDNLSLAGDGFDTVIKAKEAVDAVPNCRNKVSCADILTMATRDVVNLAGGPQYAVELGRRDGLSSSASSVTGKLPKPTFDLNQLNALFAENGLSPNDMIALSGAHTLGFAHCTKVFNRLY 212          
BLAST of CB610579 vs. ExPASy Swiss-Prot
Match: PER2_ORYSJ (Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PRX112 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.446e-26
Identity = 73/203 (35.96%), Postives = 98/203 (48.28%), Query Frame = 3
Query:   93 SFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDLTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHRIGRTHCVKLVHRLYPE 701
            S S + L +A   +     L   FY  +CP A   IK  V            S +R  FHDC VQ CDAS+LL    +         +  +R F  ++NIK  VE  C   VSCADIL ++ RD VVALGGP   +  GRRD   +        LP  + S++ ++  F+  G+D   +VAL G+H IG+  C     RLY E
Sbjct:    6 SVSLMLLVAAAMASAASAQLSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSGQEQNAGPN----AGSLRGFNVVDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQCQNFRDRLYNE 204          
BLAST of CB610579 vs. ExPASy Swiss-Prot
Match: PER2_ORYSI (Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.446e-26
Identity = 73/203 (35.96%), Postives = 98/203 (48.28%), Query Frame = 3
Query:   93 SFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDLTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHRIGRTHCVKLVHRLYPE 701
            S S + L +A   +     L   FY  +CP A   IK  V            S +R  FHDC VQ CDAS+LL    +         +  +R F  ++NIK  VE  C   VSCADIL ++ RD VVALGGP   +  GRRD   +        LP  + S++ ++  F+  G+D   +VAL G+H IG+  C     RLY E
Sbjct:    6 SVSLMLLVAAAMASAASAQLSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSGQEQNAGPN----AGSLRGFNVVDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQCQNFRDRLYNE 204          
BLAST of CB610579 vs. ExPASy Swiss-Prot
Match: PER70_MAIZE (Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.221e-26
Identity = 77/209 (36.84%), Postives = 105/209 (50.24%), Query Frame = 3
Query:   81 LALRSFSAVSLRSAL---AENEEDPGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDLTRKTLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHRIGRTHCVKLVHRLY 695
            +A  SF+++S+   L   A       L   FY  +CP+A   IK  V     +      S LR  FHDC VQ CD S+LL+ T     E+  + + G +R F  ++NIK  VE  CPGVVSCADIL ++ RD VVALGGP   +  GRRD   +   +    LP  +  ++ +   FA   +    LVAL G+H IG   C      +Y
Sbjct:    1 MASSSFTSLSVMVLLCLAAAAVASAQLSPTFYSRSCPRALATIKAAVTAAVAQEARMGASLLRLHFHDCFVQGCDGSVLLNDTATFTGEQTANPNVGSIRGFGVVDNIKAQVEAVCPGVVSCADILAVAARDSVVALGGPSWRVLLGRRDSTTASLALANSDLPAPSLDLANLTAAFAKKRLSRTDLVALSGAHTIGLAQCKNFRAHIY 209          
BLAST of CB610579 vs. ExPASy Swiss-Prot
Match: PERE5_ARMRU (Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.207e-26
Identity = 68/181 (37.57%), Postives = 101/181 (55.80%), Query Frame = 3
Query:  159 NFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDLTRKTLSEKEMDRSFGM-RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHRIGRTHCVKLVHRLY 695
            +FY  TCP   +IIK  +    +     A S LR  FHDC V+ CDAS+LLD ++   +EK+   +    R F  I+ +K A+ER CP  VSCADIL ++ +  V+  GGP   +  GRRD  ++  ++    LP    +++ + + FA +G++ P  LVAL G H  GR  C+ +  RLY
Sbjct:    5 DFYSRTCPSVFNIIKNVIVDELQTDPRIAASILRLHFHDCFVRGCDASILLDTSKSFRTEKDAAPNVNSARGFNVIDRMKTALERACPRTVSCADILTIASQISVLLSGGPSWAVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRARCLFVTARLY 185          
BLAST of CB610579 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.207e-26
Identity = 68/184 (36.96%), Postives = 101/184 (54.89%), Query Frame = 3
Query:  150 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDLTRKTLSEKEMD--RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHRIGRTHCVKLVHRLY 695
            L  ++Y  TCP+ E+ + + V         TA   LR  FHDC V  CDAS+L+  T +  SE++ D  RS     F  I  IK AVE +CP +VSC+DILV + R  +  +GGP + +K GR+D   S    +E  L   N +M  ++  F + G+    +VAL+G+H IG +HC +   R++
Sbjct:   22 LSSDYYTKTCPEFEETLVQIVTDKQIAAPTTAVGTLRLFFHDCMVDGCDASILVASTPRKTSERDADINRSLPGDAFDVITRIKTAVELKCPNIVSCSDILVGATRSLISMVGGPRVNVKFGRKDSLVSDMNRVEGKLARPNMTMDHIISIFESSGLTVQEMVALVGAHTIGFSHCKEFASRIF 205          
BLAST of CB610579 vs. ExPASy Swiss-Prot
Match: PER33_ARATH (Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.495e-26
Identity = 68/193 (35.23%), Postives = 101/193 (52.33%), Query Frame = 3
Query:  123 LAENEEDPGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDLTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHRIGRTHCVKLVHRLY 695
            L  +  D  L   FY  +CP   +I+++ +    +     A S LR  FHDC V  CDAS+LLD T    +EK+ +  +   R F  I+ +K AVER CP  VSCAD+L ++ +  V   GGP   +  GRRD  ++  ++    LP    ++  +   F  +G+D P  LVAL G+H  G+  C  ++ RLY
Sbjct:   24 LCASFSDAQLTPTFYDTSCPTVTNIVRDTIVNELRSDPRIAGSILRLHFHDCFVNGCDASILLDNTTSFRTEKDALGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWKVPLGRRDSLQAFLDLANANLPAPFFTLPQLKANFKNVGLDRPSDLVALSGAHTFGKNQCRFIMDRLY 216          
The following BLAST results are available for this feature:
BLAST of CB610579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER1B_ARMRU8.477e-2736.36Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]
PER1C_ARMRU1.107e-2636.41Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PER5_ARATH1.446e-2635.50Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 ... [more]
PER51_ARATH1.446e-2634.88Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]
PER2_ORYSJ1.446e-2635.96Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER2_ORYSI1.446e-2635.96Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX1... [more]
PER70_MAIZE3.221e-2636.84Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1[more]
PERE5_ARMRU4.207e-2637.57Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1... [more]
PER6_ARATH4.207e-2636.96Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]
PER33_ARATH5.495e-2635.23Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionALBEDO0003_IIaF_G08 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIaF_G08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610579 ID=CB610579; Name=CB610579; organism=Citrus sinensis; type=EST; length=706bp
GGGGATCTAAACCAACGTTGGTCACCTTTAGTGAGTGAAGAGTAGAAGAG
AAAATNCGTACGAAAGCTGTCTTCTTGCTTTTAGCTTTGCGATCCTTCTC
AGCTGTGTCTCTGAGGTCTGCTTTGGCAGAAAATGAAGAGGACCCAGGTC
TTGTTATGAATTTTTACAAGGATACATGCCCTCAGGCCGAGGACATTATC
AAGGAACAAGTTAAGCTTCTGTACAAGCGCCACAAGAACACTGCATTTTC
TTGGCTTAGAAACATTTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTT
CACTGCTTCTGGACTTGACAAGAAAGACCTTGTCTGAGAAGGAGATGGAC
AGGAGCTTTGGTATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGC
TGTTGAAAGAGAGTGCCCTGGTGTTGTTTCCTGTGCTGATATTCTTGTCC
TGTCCGGTAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTC
AAGACAGGAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCA
GTATCTCCCAGATCACAACGACAGCATGTCTGTTGTTCTTGAGAGGTTTG
CAGCCATTGGCATTGACGCCCCTGGACTTGTTGCTCTGCTAGGATCTCAC
AGGATCGGCAGAACTCATTGTGTGAAGCTGGTGCACCGTCTGTACCCAGA
AATTGA
back to top