CB610579

Overview
NameCB610579
Unique NameCB610579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610579 vs. ExPASy Swiss-Prot
Match: PER2_CUCSA (Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.075e-25
Identity = 60/177 (33.90%), Postives = 94/177 (53.11%), Query Frame = 3
Query:  162 FYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDLTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHRIGRTHCVKLVHRL 692
            FY ++CP   +I++  V+      +      +R  FHDC V  CD S+LL+     +SE     +  +  F  + NIK AVE+ CPGVVSCADIL ++    V   GGP   ++ GRRD R++  +     LP   ++++ +  +F  + +D+  LVAL G+H  G++ C     RL
Sbjct:    2 FYDESCPDVSNIVRRVVQQALVSDERAGARLIRLHFHDCFVNGCDGSVLLEDQPGVVSELAAPGNANITGFNIVNNIKAAVEKACPGVVSCADILAIASVGSVNLAGGPCWEVQLGRRDSRRANLQGAIDGLPSPFENVTQLKRKFDRVDLDSTDLVALSGAHTFGKSRCQFFDRRL 178          
BLAST of CB610579 vs. ExPASy Swiss-Prot
Match: PER22_ARATH (Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 7.935e-25
Identity = 69/181 (38.12%), Postives = 98/181 (54.14%), Query Frame = 3
Query:  159 NFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDLTRKTLSEKEM-DRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID-APGLVALLGSHRIGRTHCVKLVHRLY 695
            +FY  TCP   DII   +    +     A S LR  FHDC V+ CDAS+LLD +    +EK+    +   R F  I+ +K A+ER CPG VSCADIL ++ +  V+  GGP+ P+  GRRD  ++   +    LP    +++ +   FA +G++    LVAL G H  GR  C  +  RLY
Sbjct:   34 DFYFGTCPFVFDIIGNIIVDELQTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNANSARGFNVIDRMKVALERACPGRVSCADILTIASQISVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFFNLTQLKTAFADVGLNRTSDLVALSGGHTFGRAQCQFVTPRLY 214          
BLAST of CB610579 vs. ExPASy Swiss-Prot
Match: PER1_SORBI (Cationic peroxidase SPC4 (Fragment) OS=Sorghum bicolor PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.768e-24
Identity = 69/176 (39.20%), Postives = 100/176 (56.82%), Query Frame = 3
Query:  144 PGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDLTRKTLSEKEMDRSFGMR--NFRYIENIKEAVERECPG-VVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRK--SRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHRI 656
            PGL  +FYK +CP+AE I++  V+   +R    A   LR  FHDC VQ CDAS+LLD +     E++   +  +R   F+ I +I + + +EC G VVSC+D+L L+ RD VV  GGP   +  GRRD     ++ ++L   LP    ++  +L   + I +DA  LVAL G H I
Sbjct:   39 PGLSFDFYKRSCPKAESIVRSFVQDAVRRDVGLAAGLLRLHFHDCFVQGCDASVLLDGSATGPGEQQAPPNLTLRPTAFKAINDIHDRLHKECGGTVVSCSDVLALAARDSVVVSGGPSYKVPLGRRDSASFATQQDVLSG-LPPPTAAVPALLAVLSKINLDATDLVALSGGHTI 213          
BLAST of CB610579 vs. ExPASy Swiss-Prot
Match: PER60_ARATH (Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.309e-24
Identity = 68/184 (36.96%), Postives = 100/184 (54.35%), Query Frame = 3
Query:  150 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDLTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGG--PYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHRIGRTHCVKLVHRLY 695
            L + FY   C   E+I+ + V   + +  + A + +R  FHDC    CDASLLLD +    SEK+   +  +R +  I++IK AVE+EC  VVSCADI+ L+ RD V    G      + TGR DG+ S A +++  LP    +++    +F    +    +V LLG H IG THC  ++ RLY
Sbjct:   28 LRLGFYSQNCQNVENIVSKVVGEAFIKDSSIAPAMIRLYFHDCFSNGCDASLLLDGSN---SEKKASPNLSVRGYEVIDDIKSAVEKECDRVVSCADIIALATRDLVTLASGGKTRYEIPTGRLDGKISSALLVD--LPSPKMTVAETAAKFDQRKLSLNDMVLLLGGHTIGVTHCSFIMDRLY 206          
BLAST of CB610579 vs. ExPASy Swiss-Prot
Match: PER32_ARATH (Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=1 SV=3)

HSP 1 Score: 112.464 bits (280), Expect = 2.309e-24
Identity = 70/205 (34.15%), Postives = 103/205 (50.24%), Query Frame = 3
Query:   87 LRSFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDLTRKTLSEKEM-DRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHRIGRTHCVKLVHRLY 695
            L +   + L S+++  +  P     FY +TCP    I+++ +    +     A S LR  FHDC V  CDAS+LLD T    +EK+    +   R F  I+ +K AVE  CP  VSCADIL ++ +  V   GGP   +  GRRD  ++   +    LP    ++  +   F  +G+D P  LVAL G H  G+  C  ++ RLY
Sbjct:   14 LMTLGCLLLHSSISSAQLTP----TFYDNTCPSVFTIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAAPNANSARGFPVIDRMKAAVETACPRTVSCADILTIAAQQAVNLAGGPSWRVPLGRRDSLQAFFALANTNLPAPFFTLPQLKASFQNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLY 214          
BLAST of CB610579 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.309e-24
Identity = 67/214 (31.31%), Postives = 110/214 (51.40%), Query Frame = 3
Query:   60 TKAVFLLLALRSFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDLTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID-APGLVALLGSHRIGRTHCVKLVHRLY 695
            +  +F  + L     + L ++L++ +  P     FY ++CP   +I+++ +    +     A S LR  FHDC V  CDAS+LLD T    +EK+    +   R F  I+ +K AVE  CP  VSCAD+L ++ +  V   GGP   +  GRRD  ++  ++    LP    ++  + + F  +G++ +  LVAL G H  G+  C  ++ RLY
Sbjct:    6 SSTLFTCITLIPLVCLILHASLSDAQLTP----TFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLY 215          
BLAST of CB610579 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.496e-23
Identity = 75/203 (36.95%), Postives = 95/203 (46.80%), Query Frame = 3
Query:   87 LRSFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDLTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHRIGRTHCVKLVHRLY 695
            L  F  V   +A   N   P     +Y   C   E I++  V+  Y  +   A   LR  FHDC VQ CDAS+LL       SE+    +  +R F  IE  K  +E  CP  VSCADIL L+ RD V   GGP+ P+  GR DGR S A      LP   DS++V   RFA   ++   LV L   H IG   C+    R +
Sbjct:   13 LLPFFLVLATNATHTNNFLPRPRTGYYGSACWNVESIVRSVVESNYLANPANAPGILRMHFHDCFVQGCDASVLLAGPN---SERTAIPNLSLRGFNVIEEAKTQLEIACPRTVSCADILALAARDFVHLAGGPWWPVPLGRLDGRISLAS--NVILPGPTDSVAVQKLRFAEKNLNTQDLVVLAAGHTIGTAGCIVFRDRFF 210          
BLAST of CB610579 vs. ExPASy Swiss-Prot
Match: PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.334e-23
Identity = 67/201 (33.33%), Postives = 106/201 (52.74%), Query Frame = 3
Query:  105 VSLRSALAENEEDPGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDLTRKTLSEKEMDRSFGMRN--FRYIENIKEAVER--ECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHRIGRTHCVKLVHRLY 695
            +SL  ++  +     L  NFY ++CP  E I+K+ V+   K+   T  + LR  FHDC V  CDAS+++  T    +EK+   +  +    F  +   K+A++    C   VSCADIL L+ RD VVA  GP   ++ GR DG  S A  +   LP  N+ ++ + + FA   +    ++AL  +H +G  HC K+ +R+Y
Sbjct:   12 LSLAISMFPDTTTAQLKTNFYGNSCPNVEQIVKKVVQEKIKQTFVTIPATLRLFFHDCFVNGCDASVMIQSTPTNKAEKDHPDNISLAGDGFDVVIKAKKALDAIPSCKNKVSCADILALATRDVVVAAKGPSYAVELGRFDGLVSTAASVNGNLPGPNNKVTELNKLFAKNKLTQEDMIALSAAHTLGFAHCGKVFNRIY 212          
BLAST of CB610579 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.686e-23
Identity = 64/186 (34.41%), Postives = 96/186 (51.61%), Query Frame = 3
Query:  150 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDLTRKTLSEKEMDRSFGMRN--FRYIENIKEAVERE--CPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHRIGRTHCVKLVHRLY 695
            L   FY  TCP  E I++  V+   K+      + LR  FHDC V  CDAS+++  T K  +EK+   +  +    F  +   K+A++    C   VSCADIL L+ RD VVA GGP   ++ GR DG  S A  +E  LP  +D++  +   F    +    ++AL  +H +G  HC K+  R++
Sbjct:   27 LSRGFYSKTCPNVEQIVRNAVQKKIKKTFVAVPATLRLFFHDCFVNGCDASVMIQSTPKNKAEKDHPDNISLAGDGFDVVIQAKKALDSNPSCRNKVSCADILTLATRDVVVAAGGPSYEVELGRFDGLVSTASSVEGNLPGPSDNVDKLNALFTKNKLTQEDMIALSAAHTLGFAHCGKVFKRIH 212          
BLAST of CB610579 vs. ExPASy Swiss-Prot
Match: PER1_WHEAT (Peroxidase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.699e-23
Identity = 76/207 (36.71%), Postives = 101/207 (48.79%), Query Frame = 3
Query:   81 LALRSFSAVSLRSALAENEEDPG-LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDLTRKTLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHRIGRTHCVKLVHRLY 695
            +A+ S S +SL   +A      G L   FY  +CP+A   IK  V            S LR  FHDC    CDAS+LL     T  E+    + G +R F  I+NIK  +E  C   VSCADIL ++ RD VVALGGP   +  GRRD   + A +    LP  + S S +   F    ++   +VAL G+H IG+  C     R+Y
Sbjct:    1 MAMGSASCISLVVLVALATAASGQLSSTFYDTSCPRALVAIKSGVAAAVSSDPRMGASLLRLHFHDCF--GCDASVLL-----TGMEQNAGPNVGSLRGFGVIDNIKTQLESVCKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSTTASASLANSDLPGPSSSRSQLEAAFLKKNLNTVDMVALSGAHTIGKAQCSNFRTRIY 200          
The following BLAST results are available for this feature:
BLAST of CB610579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER2_CUCSA6.075e-2533.90Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV... [more]
PER22_ARATH7.935e-2538.12Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=... [more]
PER1_SORBI1.768e-2439.20Cationic peroxidase SPC4 (Fragment) OS=Sorghum bic... [more]
PER60_ARATH2.309e-2436.96Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=... [more]
PER32_ARATH2.309e-2434.15Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=... [more]
PER1A_ARMRU2.309e-2431.31Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PER70_ARATH1.496e-2336.95Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=... [more]
PER73_ARATH3.334e-2333.33Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=... [more]
PER35_ARATH5.686e-2334.41Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]
PER1_WHEAT9.699e-2336.71Peroxidase OS=Triticum aestivum PE=2 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionALBEDO0003_IIaF_G08 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIaF_G08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610579 ID=CB610579; Name=CB610579; organism=Citrus sinensis; type=EST; length=706bp
GGGGATCTAAACCAACGTTGGTCACCTTTAGTGAGTGAAGAGTAGAAGAG
AAAATNCGTACGAAAGCTGTCTTCTTGCTTTTAGCTTTGCGATCCTTCTC
AGCTGTGTCTCTGAGGTCTGCTTTGGCAGAAAATGAAGAGGACCCAGGTC
TTGTTATGAATTTTTACAAGGATACATGCCCTCAGGCCGAGGACATTATC
AAGGAACAAGTTAAGCTTCTGTACAAGCGCCACAAGAACACTGCATTTTC
TTGGCTTAGAAACATTTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTT
CACTGCTTCTGGACTTGACAAGAAAGACCTTGTCTGAGAAGGAGATGGAC
AGGAGCTTTGGTATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGC
TGTTGAAAGAGAGTGCCCTGGTGTTGTTTCCTGTGCTGATATTCTTGTCC
TGTCCGGTAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTC
AAGACAGGAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCA
GTATCTCCCAGATCACAACGACAGCATGTCTGTTGTTCTTGAGAGGTTTG
CAGCCATTGGCATTGACGCCCCTGGACTTGTTGCTCTGCTAGGATCTCAC
AGGATCGGCAGAACTCATTGTGTGAAGCTGGTGCACCGTCTGTACCCAGA
AATTGA
back to top