CB610598

Overview
NameCB610598
Unique NameCB610598
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length592
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1856 contig Csv1_Contig1856:509..1100. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB610598 vs. ExPASy Swiss-Prot
Match: LLDD_SALNS (L-lactate dehydrogenase [cytochrome] OS=Salmonella newport (strain SL254) GN=lldD PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.177e-28
Identity = 73/206 (35.44%), Postives = 111/206 (53.88%), Query Frame = 1
Query:   40 KRAERAGFKAIDLTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGV 585
            +RA+ AG   +  TVD P  G R  D  +  +  P+  ++ Y             GL            Y+GK    +D     ++AN  D S++WKD++W++     P+++KG+L  EDA  A+++GA GI+VSNHG RQLD V ++  AL  +  A KG + +  D G+R G DV + +ALGA  V +GR   ++LA  G+AGV
Sbjct:  142 ERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLANNFDPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGV 344          
BLAST of CB610598 vs. ExPASy Swiss-Prot
Match: LLDD_SALHS (L-lactate dehydrogenase [cytochrome] OS=Salmonella heidelberg (strain SL476) GN=lldD PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.177e-28
Identity = 73/206 (35.44%), Postives = 111/206 (53.88%), Query Frame = 1
Query:   40 KRAERAGFKAIDLTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGV 585
            +RA+ AG   +  TVD P  G R  D  +  +  P+  ++ Y             GL            Y+GK    +D     ++AN  D S++WKD++W++     P+++KG+L  EDA  A+++GA GI+VSNHG RQLD V ++  AL  +  A KG + +  D G+R G DV + +ALGA  V +GR   ++LA  G+AGV
Sbjct:  142 ERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLANNFDPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGV 344          
BLAST of CB610598 vs. ExPASy Swiss-Prot
Match: LLDD_SALG2 (L-lactate dehydrogenase [cytochrome] OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=lldD PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.177e-28
Identity = 73/206 (35.44%), Postives = 111/206 (53.88%), Query Frame = 1
Query:   40 KRAERAGFKAIDLTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGV 585
            +RA+ AG   +  TVD P  G R  D  +  +  P+  ++ Y             GL            Y+GK    +D     ++AN  D S++WKD++W++     P+++KG+L  EDA  A+++GA GI+VSNHG RQLD V ++  AL  +  A KG + +  D G+R G DV + +ALGA  V +GR   ++LA  G+AGV
Sbjct:  142 ERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLANNFDPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGV 344          
BLAST of CB610598 vs. ExPASy Swiss-Prot
Match: LLDD_SALEP (L-lactate dehydrogenase [cytochrome] OS=Salmonella enteritidis PT4 (strain P125109) GN=lldD PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.177e-28
Identity = 73/206 (35.44%), Postives = 111/206 (53.88%), Query Frame = 1
Query:   40 KRAERAGFKAIDLTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGV 585
            +RA+ AG   +  TVD P  G R  D  +  +  P+  ++ Y             GL            Y+GK    +D     ++AN  D S++WKD++W++     P+++KG+L  EDA  A+++GA GI+VSNHG RQLD V ++  AL  +  A KG + +  D G+R G DV + +ALGA  V +GR   ++LA  G+AGV
Sbjct:  142 ERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLANNFDPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGV 344          
BLAST of CB610598 vs. ExPASy Swiss-Prot
Match: LLDD_SALDC (L-lactate dehydrogenase [cytochrome] OS=Salmonella dublin (strain CT_02021853) GN=lldD PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.177e-28
Identity = 73/206 (35.44%), Postives = 111/206 (53.88%), Query Frame = 1
Query:   40 KRAERAGFKAIDLTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGV 585
            +RA+ AG   +  TVD P  G R  D  +  +  P+  ++ Y             GL            Y+GK    +D     ++AN  D S++WKD++W++     P+++KG+L  EDA  A+++GA GI+VSNHG RQLD V ++  AL  +  A KG + +  D G+R G DV + +ALGA  V +GR   ++LA  G+AGV
Sbjct:  142 ERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLANNFDPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGV 344          
BLAST of CB610598 vs. ExPASy Swiss-Prot
Match: LLDD_SALAR (L-lactate dehydrogenase [cytochrome] OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=lldD PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.177e-28
Identity = 73/206 (35.44%), Postives = 111/206 (53.88%), Query Frame = 1
Query:   40 KRAERAGFKAIDLTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGV 585
            +RA+ AG   +  TVD P  G R  D  +  +  P+  ++ Y             GL            Y+GK    +D     ++AN  D S++WKD++W++     P+++KG+L  EDA  A+++GA GI+VSNHG RQLD V ++  AL  +  A KG + +  D G+R G DV + +ALGA  V +GR   ++LA  G+AGV
Sbjct:  142 ERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLANNFDPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGV 344          
BLAST of CB610598 vs. ExPASy Swiss-Prot
Match: LLDD_SALA4 (L-lactate dehydrogenase [cytochrome] OS=Salmonella agona (strain SL483) GN=lldD PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.177e-28
Identity = 73/206 (35.44%), Postives = 111/206 (53.88%), Query Frame = 1
Query:   40 KRAERAGFKAIDLTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGV 585
            +RA+ AG   +  TVD P  G R  D  +  +  P+  ++ Y             GL            Y+GK    +D     ++AN  D S++WKD++W++     P+++KG+L  EDA  A+++GA GI+VSNHG RQLD V ++  AL  +  A KG + +  D G+R G DV + +ALGA  V +GR   ++LA  G+AGV
Sbjct:  142 ERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLANNFDPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGV 344          
BLAST of CB610598 vs. ExPASy Swiss-Prot
Match: LLDD_PSEA7 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas aeruginosa (strain PA7) GN=lldD PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.177e-28
Identity = 75/216 (34.72%), Postives = 113/216 (52.31%), Query Frame = 1
Query:    4 VTKDPYVDAQDXKRAERAGFKAIDLTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLY-------IGKMDKTDDSG-LASYVAN-------------QIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVR 588
            V KD        +RA+ AG   +  TVD P  G R  D  +    P     +  + +        +G + K  D G +++Y  N               D S++WKD++W++   + P+++KG+L  EDA  A+++GA GI+VSNHG RQLD V ++  AL  +  A KG + +  D G+R G DV + +ALGA  V +GR   ++LA  GEAGVR
Sbjct:  130 VLKDRGFMRNALERAKAAGVTTLVFTVDMPVPGARYRDAHSGMSGPYAAPRRILQAMTHPAWAWDVGLLGKPHDLGNISTYRGNPTGLEDYIGWLGANFDPSISWKDLEWIREFWNGPMVIKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGELAILADSGIRTGLDVVRMIALGADSVLLGRAFVYALAAAGEAGVR 345          
BLAST of CB610598 vs. ExPASy Swiss-Prot
Match: LLDD_KLEP7 (L-lactate dehydrogenase [cytochrome] OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=lldD PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.177e-28
Identity = 73/206 (35.44%), Postives = 110/206 (53.40%), Query Frame = 1
Query:   40 KRAERAGFKAIDLTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGV 585
            +RA+ AG   +  TVD P  G R  D  +  +  P+  L+ Y             GL            Y+GK    +D     ++AN  D S++WKD++W++     P+++KG+L  EDA  A+++GA GI+VSNHG RQLD V ++  AL  +  A KG + +  D G+R G DV + +ALGA  V +GR   ++LA  G+ GV
Sbjct:  142 ERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAALRRYWQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLANNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDITILADSGIRNGLDVVRMIALGADSVLLGRAYLYALATHGKQGV 344          
BLAST of CB610598 vs. ExPASy Swiss-Prot
Match: LLDD_ESCF3 (L-lactate dehydrogenase [cytochrome] OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=lldD PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.177e-28
Identity = 73/206 (35.44%), Postives = 111/206 (53.88%), Query Frame = 1
Query:   40 KRAERAGFKAIDLTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGV 585
            +RA+ AG   +  TVD P  G R  D  +  +  P+  ++ Y             GL            Y+GK    +D     ++AN  D S++WKD++W++     P+++KG+L  EDA  A+++GA GI+VSNHG RQLD V ++  AL  +  A KG + +  D G+R G DV + +ALGA  V +GR   ++LA  G+AGV
Sbjct:  142 ERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYWQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLANNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGV 344          
The following BLAST results are available for this feature:
BLAST of CB610598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD_SALNS7.177e-2835.44L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALHS7.177e-2835.44L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALG27.177e-2835.44L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALEP7.177e-2835.44L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALDC7.177e-2835.44L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALAR7.177e-2835.44L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALA47.177e-2835.44L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_PSEA77.177e-2834.72L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_KLEP77.177e-2835.44L-lactate dehydrogenase [cytochrome] OS=Klebsiella... [more]
LLDD_ESCF37.177e-2835.44L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IIaF_G06 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIaF_G06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610598 ID=CB610598; Name=CB610598; organism=Citrus sinensis; type=EST; length=592bp
GGGGTGACCAAGGACCCGTATGTGGACGCACAGGATCNAAAAAGAGCTGA
AAGGGCCGGTTTTAAGGCGATTGATCTTACCGTCGATACTCCAAGGCTTG
GCCGTCGGGAAGCTGATATTAAGAACAGATTTGTTTTGCCGCCACATCTG
ACTTTGAAGAACTATGAGGGCTTGTATATTGGCAAGATGGATAAGACTGA
TGACTCTGGATTAGCTTCGTATGTTGCCAACCAAATTGACCGGTCACTGA
ACTGGAAGGATGTGAAGTGGCTTCAAACAATCACCTCACTGCCAATACTC
GTGAAGGGTGTTCTTACTGCTGAGGATGCAAGTCTAGCAATACAATATGG
AGCTGCAGGAATCATTGTATCCAATCACGGAGCGCGCCAACTAGATTATG
TCCCTGCAACTGTTATGGCTTTGGAAGAGGTTGTTCAAGCTGCAAAAGGC
CGAGTTCCTGTTTTCCTTGATGGTGGGGTTCGTCGTGGAACCGATGTCTT
CAAGGCTTTGGCTCTAGGAGCATCTGGAGTATTTGTTGGAAGGCCAGTAC
CATTCTCGCTGGCAGTTGATGGAGAGGCTGGTGTGAGAAAAG
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