CB610607
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB610607 vs. ExPASy Swiss-Prot
Match: AGL6_ARATH (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6 PE=1 SV=2) HSP 1 Score: 186.422 bits (472), Expect = 1.449e-46 Identity = 112/232 (48.28%), Postives = 149/232 (64.22%), Query Frame = 2 Query: 26 MGRGRVELMRIENKINRRVTFAKRRNGLLKKAYELSVLSDVEVALIIFSNSGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREALLSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAAFAGLQLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDSFFHALGXEPTLQIGYQ 721 MGRGRVE+ RIENKINR+VTF+KRRNGLLKKAYELSVL D EVALIIFS+ GKLYEF S + T+ERY +C Y N E S QE KLK++YE+L R+ RNLLGE+LG + KEL++LERQL+ +L R +TQ M++ + +L+ KE+ L + NK LK + T H AF Q + ++ +P+ + + ++P+ P EP LQIG+Q Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF-GSVGIESTIERYNRC-YNCSLSNNKPEETTQSWCQEVTKLKSKYESLVRTNRNLLGEDLGEMGVKELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDINKQLKIKFETEGH-AFKTFQDLWANSAASVAGDPNNSE--FPVEPSHPN----VLDCNTEPFLQIGFQ 223
BLAST of CB610607 vs. ExPASy Swiss-Prot
Match: AP1_SINAL (Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.947e-44 Identity = 97/185 (52.43%), Postives = 134/185 (72.43%), Query Frame = 2 Query: 26 MGRGRVELMRIENKINRRVTFAKRRNGLLKKAYELSVLSDVEVALIIFSNSGKLYEFCSSSSMVKTLERYQKCNYG-----APEPNVSAREALLSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEAN----KTLKQRTMTLR 553 MGRGRV+L RIENKINR+VTF+KRR GLLKKA+E+SVL D EVAL++FS+ GKL+E+ + S M K LERY++ +Y APE +V+ ++ EY +LKA+ E L+R+QR+ LGE+L ++SKEL++LE+QLD +LK IRS + Q M D++ ELQ KE+ + E N K +K+R LR Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTNWSM-----EYNRLKAKIELLERNQRHYLGEDLQAMSSKELQNLEQQLDTALKHIRSRKNQLMHDSINELQRKEKAIQEQNSMLSKQIKEREKILR 180
BLAST of CB610607 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSJ (MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica GN=MADS14 PE=1 SV=2) HSP 1 Score: 177.563 bits (449), Expect = 6.733e-44 Identity = 96/178 (53.93%), Postives = 129/178 (72.47%), Query Frame = 2 Query: 26 MGRGRVELMRIENKINRRVTFAKRRNGLLKKAYELSVLSDVEVALIIFSNSGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREALLSSQ--------QEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQ 535 MGRG+V+L RIENKINR+VTF+KRR+GLLKKA E+SVL D EVALIIFS GKLYE+ + S M K LERY++ +Y A + L+S++ EY KLKA+ E +Q+ Q++L+GE+L LN KEL+ LE+QL+ SLK IRS ++Q ML+++ ELQ KE+ L E NK L++ Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATDSCMDKILERYERYSY--------AEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQK 170
BLAST of CB610607 vs. ExPASy Swiss-Prot
Match: CAL_ARATH (Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL PE=1 SV=3) HSP 1 Score: 176.407 bits (446), Expect = 1.500e-43 Identity = 103/211 (48.82%), Postives = 140/211 (66.35%), Query Frame = 2 Query: 26 MGRGRVELMRIENKINRRVTFAKRRNGLLKKAYELSVLSDVEVALIIFSNSGKLYEFCSSSSMVKTLERYQKCNYG-----APEPNVSAREALLSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEAN----KTLKQRTMTLRHAAFAGLQLMEGYQVNTLQLNPSAED 631 MGRGRVEL RIENKINR+VTF+KRR GLLKKA E+SVL D EV+LI+FS+ GKL+E+ S S M K LERY++ +Y AP+ +V+A+ + EY +LKA+ E L+R+QR+ LGEEL P++ K+L++LE+QL+ +LK IRS + Q M ++L LQ KE+ + E N K +K+R LR Q QLN S +D Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSESCMEKVLERYERYSYAERQLIAPDSHVNAQ---TNWSMEYSRLKAKIELLERNQRHYLGEELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENILRTK-----------QTQCEQLNRSVDD 197
BLAST of CB610607 vs. ExPASy Swiss-Prot
Match: MAD15_ORYSJ (MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica GN=MADS15 PE=1 SV=2) HSP 1 Score: 174.481 bits (441), Expect = 5.700e-43 Identity = 99/209 (47.37%), Postives = 138/209 (66.03%), Query Frame = 2 Query: 26 MGRGRVELMRIENKINRRVTFAKRRNGLLKKAYELSVLSDVEVALIIFSNSGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREALLSSQ--------QEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAAFAGLQLMEGYQVNTLQLNPSAE 628 MGRG+V+L RIENKINR+VTF+KRRNGLLKKA+E+SVL D EVA I+FS GKLYE+ + S M K LERY++ +Y A +AL+S++ EY KLKA+ E +Q+ ++L+GE+L LN KEL+ LE+QL+ SLK I S ++ ML++++ELQ KE+ L E NK L Q+ + R G Q + + +Q A+ Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDSRMDKILERYERYSY--------AEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLESLNLKELQQLEQQLESSLKHIISRKSHLMLESISELQKKERSLQEENKAL-QKELVERQKNVRGQQQVGQWDQTQVQAQAQAQ 200
BLAST of CB610607 vs. ExPASy Swiss-Prot
Match: AP1_ARATH (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1 PE=1 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 7.444e-43 Identity = 94/185 (50.81%), Postives = 133/185 (71.89%), Query Frame = 2 Query: 26 MGRGRVELMRIENKINRRVTFAKRRNGLLKKAYELSVLSDVEVALIIFSNSGKLYEFCSSSSMVKTLERYQKCNYG-----APEPNVSAREALLSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEAN----KTLKQRTMTLR 553 MGRGRV+L RIENKINR+VTF+KRR GLLKKA+E+SVL D EVAL++FS+ GKL+E+ + S M K LERY++ +Y APE +V+ ++ EY +LKA+ E L+R+QR+ LGE+L ++ KEL++LE+QLD +LK IR+ + Q M +++ ELQ KE+ + E N K +K+R LR Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTNWSM-----EYNRLKAKIELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREKILR 180
BLAST of CB610607 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSI (MADS-box transcription factor 14 OS=Oryza sativa subsp. indica GN=MADS14 PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 9.722e-43 Identity = 94/178 (52.81%), Postives = 128/178 (71.91%), Query Frame = 2 Query: 26 MGRGRVELMRIENKINRRVTFAKRRNGLLKKAYELSVLSDVEVALIIFSNSGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREALLSSQ--------QEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQ 535 MGRG+V+L RIEN INR+VTF+KRR+GLLKKA E+SVL D EVALIIFS GKLY++ + S M K LERY++ +Y A + L+S++ EY KLKA+ E +Q+ Q++L+GE+L LN KEL+ LE+QL+ SLK IRS ++Q ML+++ ELQ KE+ L E NK L++ Sbjct: 1 MGRGKVQLKRIENTINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYKYATDSCMDKILERYERYSY--------AEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQK 170
BLAST of CB610607 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSJ (MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica GN=MADS18 PE=1 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.829e-42 Identity = 95/173 (54.91%), Postives = 123/173 (71.10%), Query Frame = 2 Query: 26 MGRGRVELMRIENKINRRVTFAKRRNGLLKKAYELSVLSDVEVALIIFSNSGKLYEFCSSSSMVKTLERYQKCNY---GAPEPNVSAREALLSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQ 535 MGRG V+L RIENKINR+VTF+KRRNGLLKKA+E+SVL D +VALI+FS GKLYEF S SSM LERYQ+ ++ EPN +E + EY LK++ +ALQ+SQR LLGE+L L KEL+ LE QL+ SLK IRS + Q + ++++ELQ KE+ L N L++ Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQE---NWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQK 170
BLAST of CB610607 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSI (MADS-box transcription factor 18 OS=Oryza sativa subsp. indica GN=MADS18 PE=2 SV=2) HSP 1 Score: 172.17 bits (435), Expect = 2.829e-42 Identity = 95/173 (54.91%), Postives = 123/173 (71.10%), Query Frame = 2 Query: 26 MGRGRVELMRIENKINRRVTFAKRRNGLLKKAYELSVLSDVEVALIIFSNSGKLYEFCSSSSMVKTLERYQKCNY---GAPEPNVSAREALLSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQ 535 MGRG V+L RIENKINR+VTF+KRRNGLLKKA+E+SVL D +VALI+FS GKLYEF S SSM LERYQ+ ++ EPN +E + EY LK++ +ALQ+SQR LLGE+L L KEL+ LE QL+ SLK IRS + Q + ++++ELQ KE+ L N L++ Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQE---NWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQK 170
BLAST of CB610607 vs. ExPASy Swiss-Prot
Match: AGL8_SOLLC (Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 6.967e-41 Identity = 86/171 (50.29%), Postives = 124/171 (72.51%), Query Frame = 2 Query: 26 MGRGRVELMRIENKINRRVTFAKRRNGLLKKAYELSVLSDVEVALIIFSNSGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREALLSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR 538 MGRGRV+L RIENKINR+VTF+KRR+GLLKKA+E+SVL D EV LI+FS GKL+E+ + S M + LERY++ ++ + + + +S E+ KLKAR E LQR+Q++ +GE+L L+ KEL++LE QLD +LK IRS + Q M ++++ LQ K++ L E N L ++ Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERILERYERYSFAEKQLVPTDHTSPVSWTLEHRKLKARLEVLQRNQKHYVGEDLESLSMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKKDRALQEQNNQLSKK 171 The following BLAST results are available for this feature:
BLAST of CB610607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 118
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Sequences
The
following sequences are available for this feature:
EST sequence >CB610607 ID=CB610607; Name=CB610607; organism=Citrus sinensis; type=EST; length=765bpback to top |