CB610607
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB610607 vs. ExPASy Swiss-Prot
Match: MAD25_ORYSJ (MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica GN=MADS25 PE=2 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 7.990e-29 Identity = 77/214 (35.98%), Postives = 127/214 (59.35%), Query Frame = 2 Query: 26 MGRGRVELMRIENKINRRVTFAKRRNGLLKKAYELSVLSDVEVALIIFSNSGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREALLSS---QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAAFAGL--QLMEGYQVNTLQLNPSAEDCGYGLKP 652 MGRG++ + RI+N +NR+VTF+KRR GL+KKA EL++L D +V LI+FS +G+LY+F SSSSM +ERYQ+ A E + + + Q+E L+ + + L + R LLGEE+ ++L+ L+ Q++MSL IR+ + Q + + + +L K L+ + N L+++ + H L +L G ++ Q+ S++D G P Sbjct: 1 MGRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDF-SSSSMKSIIERYQE----AGEEHCRLLNPMSEAKFWQREVTTLRQQVQNLHHNNRQLLGEEISNFTVRDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGSLVQKENSELRKK-FNIAHQRNIELHKKLNSGESTSSEQVTRSSKDPGESSTP 208
BLAST of CB610607 vs. ExPASy Swiss-Prot
Match: MAD33_ORYSJ (MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica GN=MADS33 PE=2 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 3.036e-28 Identity = 71/172 (41.28%), Postives = 109/172 (63.37%), Query Frame = 2 Query: 26 MGRGRVELMRIENKINRRVTFAKRRNGLLKKAYELSVLSDVEVALIIFSNSGKLYEFCSSSSMVKTLERYQ-KCNYGAPEPNVSAREALLSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR 538 M RG+V++ RIEN ++R+VTF KRR GLLKKA ELSVL D +V +IIFS+ GKL+E ++ +M +ERYQ G EP R+ + ++Q L+ + LQR R+ G G + +L +LE+ L++ + QIR+T+ Q M + L++KE +L EAN+ L+++ Sbjct: 1 MVRGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATNGNMHNLVERYQSNVAGGQMEPGALQRQQV--AEQGIFLLREEIDLLQRGLRSTYGGGAGEMTLDKLHALEKGLELWIYQIRTTKMQMMQQEIQFLRNKEGILKEANEMLQEK 170
BLAST of CB610607 vs. ExPASy Swiss-Prot
Match: AGL17_ARATH (Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana GN=AGL17 PE=2 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 3.966e-28 Identity = 72/175 (41.14%), Postives = 107/175 (61.14%), Query Frame = 2 Query: 26 MGRGRVELMRIENKINRRVTFAKRRNGLLKKAYELSVLSDVEVALIIFSNSGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREALLSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTL 550 MGRG++ + +I++ +R+VTF+KRR GL+KKA EL++L D EV LIIFSN+ KLY+F +SSS+ T+ER+ E A E Q+E L+ +LQ + R L G EL L+ KEL+++E QL+MSL+ IR R Q + + + EL K L+ N L ++ + Sbjct: 1 MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDF-ASSSVKSTIERFNTAKMEEQELMNPASEVKF-WQREAETLRQELHSLQENYRQLTGVELNGLSVKELQNIESQLEMSLRGIRMKREQILTNEIKELTRKRNLVHHENLELSRKVQRI 173
BLAST of CB610607 vs. ExPASy Swiss-Prot
Match: M17_MAIZE (MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.179e-28 Identity = 82/244 (33.61%), Postives = 129/244 (52.87%), Query Frame = 2 Query: 26 MGRGRVELMRIENKINRRVTFAKRRNGLLKKAYELSVLSDVEVALIIFSNSGKLYEFCS-SSSMVKTLERYQKCNYGAPEPNVSAREALLSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAAFAG-LQLMEGYQVNTLQLNPS------------------------------AEDCGYGLKPAQP 661 MGRG++E+ RIEN NR+VTF+KRR GLLKKA EL+VL D V ++IFS++GK++E+CS + S+ + +E+YQ E ++ LL E ++K E L+ R G++L L ++ LE+QL+ S+ ++R+ + Q + L L+ KEQ+L + N L + + AA G ++L E + LQ P+ A+D G+ L+P QP Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPACSLRELIEQYQHATNSHFEEINHDQQILL----EMTRMKNEMEKLETGIRRYTGDDLSSLTLDDVSDLEQQLEYSVSKVRARKHQLLNQQLDNLRRKEQILEDQNTFLYRMINENQQAALTGEVKLGEMAPLAMLQPPPAFAHSATAYYGGESSSSGTALQLMSAAPQLHADDLGFRLQPTQP 240
BLAST of CB610607 vs. ExPASy Swiss-Prot
Match: AGL15_ARATH (Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana GN=AGL15 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.764e-28 Identity = 77/176 (43.75%), Postives = 110/176 (62.50%), Query Frame = 2 Query: 26 MGRGRVELMRIENKINRRVTFAKRRNGLLKKAYELSVLSDVEVALIIFSNSGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREALLSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLR 553 MGRG++E+ RIEN +R+VTF+KRR+GLLKKA ELSVL D EVA+I+FS SGKL+E+ SS+ M +TL RY N+ + + + + E LK + LQ L G+ L PL KEL+SLE+QL +L +R + + + + L E + KEQ N+TL+++ LR Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEY-SSTGMKQTLSRYG--NHQSSSASKAEEDC-----AEVDILKDQLSKLQEKHLQLQGKGLNPLTFKELQSLEQQLYHALITVRERKERLLTNQLEESRLKEQRAELENETLRRQVQELR 168
BLAST of CB610607 vs. ExPASy Swiss-Prot
Match: AGL12_ARATH (Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana GN=AGL12 PE=2 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 6.764e-28 Identity = 71/178 (39.89%), Postives = 104/178 (58.43%), Query Frame = 2 Query: 26 MGRGRVELMRIENKINRRVTFAKRRNGLLKKAYELSVLSDVEVALIIFSNSGKLYEFCSSSSMVKTLERYQKC---NYGAPEPNVSAREAL----LSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR 538 M RG+++L RIEN ++R+VTF KRR GLLKKA ELSVL D E+ ++IFS GKL+E + +M +++Y KC G+ +A+E L L + E LK E LQ+ + G G +N +EL LE+ L+ + QIRS + ML + L++KE +L NK L ++ Sbjct: 1 MARGKIQLKRIENPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELATKGTMEGMIDKYMKCTGGGRGSSSATFTAQEQLQPPNLDPKDEINVLKQEIEMLQKGISYMFGGGDGAMNLEELLLLEKHLEYWISQIRSAKMDVMLQEIQSLRNKEGVLKNTNKYLLEK 178
BLAST of CB610607 vs. ExPASy Swiss-Prot
Match: MAD57_ORYSJ (MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica GN=MADS57 PE=2 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 8.834e-28 Identity = 68/170 (40.00%), Postives = 106/170 (62.35%), Query Frame = 2 Query: 26 MGRGRVELMRIENKINRRVTFAKRRNGLLKKAYELSVLSDVEVALIIFSNSGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREALLSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQ 535 MGRG++ + RI+N +R+VTF+KRRNGLLKKA ELS+L D EV L++FS++G+LYEF SS++M ++RY N ++ + Q+E L+ + LQ S + L+GEEL L ++L+ LE +L++SL+ IR + + + EL K L+ + N L + Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEF-SSTNMKTVIDRYTNAKEELLGGNATSEIKIW--QREAASLRQQLHNLQESHKQLMGEELSGLGVRDLQGLENRLEISLRNIRMRKDNLLKSEIEELHVKGSLIHQENIELSR 167
BLAST of CB610607 vs. ExPASy Swiss-Prot
Match: SVP_ARATH (MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.842e-26 Identity = 66/171 (38.60%), Postives = 105/171 (61.40%), Query Frame = 2 Query: 26 MGRGRVELMRIENKINRRVTFAKRRNGLLKKAYELSVLSDVEVALIIFSNSGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREALLSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR 538 M R ++++ +I+N R+VTF+KRR GL KKA ELSVL D +VALIIFS++GKL+EFC SSSM + LER+ + + + + E L ++ ++ R + GEEL L+ +EL+ LE+ L+ L ++ T++ ++ ++ELQ K L + NK L+Q+ Sbjct: 1 MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFC-SSSMKEVLERHNLQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGLDIEELQQLEKALETGLTRVIETKSDKIMSEISELQKKGMQLMDENKRLRQQ 170
BLAST of CB610607 vs. ExPASy Swiss-Prot
Match: MAD29_ORYSJ (MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica GN=MADS29 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.712e-26 Identity = 86/265 (32.45%), Postives = 128/265 (48.30%), Query Frame = 2 Query: 26 MGRGRVELMRIENKINRRVTFAKRRNGLLKKAYELSVLSDVEVALIIFSNSGKLYEFCS-SSSMVKTLERYQKCNYGAPEPNVSAREALLSSQ--QEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAAFAG-------------LQLM--------EGYQVNTLQLNP------SAEDCGYGLKPAQPQ------GDSFFHALGXEPTLQI 712 MGRG++E+ RIEN NR+VTF+KRR GLLKKA EL+VL D V ++IFS++GK++E+CS + S+ + +E YQ N E Q E +++ E L R G++L L ++ LE+QL+ S+ ++R+ + Q + L L+ KE +L + N L + H A G L ++ E LQL P +A G+ L+P QP S FHA LQ+ Sbjct: 1 MGRGKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPTCSLRELIEHYQTVT------NTHFEEINHDQQIFVEMTRMRNEMEKLDGGIRRFTGDDLSNLTLADINDLEQQLEFSVTKVRARKHQLLNQQLDNLRRKEHILEDQNSFLCRMINENHHQAAVGGGDVKAMVEMAPVLSMLTAAPAYYGEESSSTALQLTPPLHAVDAAAAAGFRLQPTQPNLQDPGCSSSSFHAAAAGHGLQL 259
BLAST of CB610607 vs. ExPASy Swiss-Prot
Match: FLC_ARATH (MADS-box protein FLOWERING LOCUS C OS=Arabidopsis thaliana GN=FLC PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.848e-26 Identity = 72/193 (37.31%), Postives = 112/193 (58.03%), Query Frame = 2 Query: 26 MGRGRVELMRIENKINRRVTFAKRRNGLLKKAYELSVLSDVEVALIIFSNSGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREALLSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRH-AAFAGLQLMEGYQVN 601 MGR ++E+ RIENK +R+VTF+KRRNGL++KA +LSVL D VAL++ S SGKLY F S ++VK L+RY K + ++ A L Q + L + YE L+ L+G + ++ L LE L+ +L R+ +T+ ML + L+ KE++L E N+ L + H A A +++ Q++ Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSGDNLVKILDRYGKQH----ADDLKA----LDHQSKALNYGSHYELLELVDSKLVGSNVKNVSIDALVQLEEHLETALSVTRAKKTELMLKLVENLKEKEKMLKEENQVLASQMENNHHVGAEAEMEMSPAGQIS 185 The following BLAST results are available for this feature:
BLAST of CB610607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 118
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Sequences
The
following sequences are available for this feature:
EST sequence >CB610607 ID=CB610607; Name=CB610607; organism=Citrus sinensis; type=EST; length=765bpback to top |