CB610616
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB610616 vs. ExPASy Swiss-Prot
Match: RL3_BOVIN (60S ribosomal protein L3 OS=Bos taurus GN=RPL3 PE=2 SV=2) HSP 1 Score: 206.838 bits (525), Expect = 7.241e-53 Identity = 99/155 (63.87%), Postives = 122/155 (78.71%), Query Frame = 1 Query: 10 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA------SQESHSAMTEFDRTEKDITPMGGSPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQRTQEKAKYYGRLK 456 +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+ ++A T++D ++K I P+GG HYG V D++++KGC VG KKRV+TLR+SLL QT R ALE+I LKFIDT+SKFGHGRFQ +EK + G LK Sbjct: 239 KLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 393
BLAST of CB610616 vs. ExPASy Swiss-Prot
Match: RL3_HUMAN (60S ribosomal protein L3 OS=Homo sapiens GN=RPL3 PE=1 SV=2) HSP 1 Score: 206.453 bits (524), Expect = 9.457e-53 Identity = 99/155 (63.87%), Postives = 122/155 (78.71%), Query Frame = 1 Query: 10 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA------SQESHSAMTEFDRTEKDITPMGGSPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQRTQEKAKYYGRLK 456 +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+ ++A T++D ++K I P+GG HYG V D++++KGC VG KKRV+TLR+SLL QT R ALE+I LKFIDT+SKFGHGRFQ +EK + G LK Sbjct: 239 KLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
BLAST of CB610616 vs. ExPASy Swiss-Prot
Match: RL3_DICDI (60S ribosomal protein L3 OS=Dictyostelium discoideum GN=rpl3 PE=1 SV=2) HSP 1 Score: 206.068 bits (523), Expect = 1.235e-52 Identity = 98/157 (62.42%), Postives = 119/157 (75.80%), Query Frame = 1 Query: 1 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----HSAMTEFDRTEKDITPMGGSPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQRTQEKAKYYGRLKA 459 GV +LPRKTH+GLRKVACIGAWHP+RVS TV RAGQ GYHHR E NKKIY++G+A E + TEFD TEK I PMGG HYG+V ++L++KGC GP+KR +TLR+S+ QT R ALE+I LKFIDTSSKFGHG Q ++K KY+G K+ Sbjct: 237 GVRKLPRKTHKGLRKVACIGAWHPSRVSTTVPRAGQLGYHHRVERNKKIYRIGQAQPEDGKQISTGKTEFDLTEKTINPMGGFAHYGMVKHEFLMLKGCVAGPRKRALTLRKSITTQTGRAALEKITLKFIDTSSKFGHGLHQTAEDKTKYFGVKKS 393
BLAST of CB610616 vs. ExPASy Swiss-Prot
Match: RL3L_BOVIN (60S ribosomal protein L3-like OS=Bos taurus GN=RPL3L PE=2 SV=3) HSP 1 Score: 205.297 bits (521), Expect = 2.107e-52 Identity = 97/155 (62.58%), Postives = 119/155 (76.77%), Query Frame = 1 Query: 10 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------HSAMTEFDRTEKDITPMGGSPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQRTQEKAKYYGRLK 456 +LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKIY++G+ ++A T +D T+K ITP+GG PHYG VN D++++KGC G KKRV+TLR+SLL SR ALE I+LKFIDT+SKFGHGRFQ QEK + G K Sbjct: 239 KLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKVVKNNASTSYDVTDKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQALENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQK 393
BLAST of CB610616 vs. ExPASy Swiss-Prot
Match: RL3_KLULA (60S ribosomal protein L3 OS=Kluyveromyces lactis GN=RPL3 PE=3 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 6.130e-52 Identity = 97/152 (63.82%), Postives = 119/152 (78.29%), Query Frame = 1 Query: 1 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGSPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQRTQEKAKYYGRLK 456 G +LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYHHRT +N K+Y++GK E+++A TEFDRT+K ITPMGG HYG +N D++++KG G +KRVVTLR+SL TSR ALEE+ LK+IDT+SKFG GRFQ EK + G LK Sbjct: 234 GTKKLPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKVYRVGKGDDEANAA-TEFDRTKKTITPMGGFVHYGAINNDFVILKGSIPGTRKRVVTLRKSLYTNTSRKALEEVTLKWIDTASKFGKGRFQTPAEKHAFLGTLK 384
BLAST of CB610616 vs. ExPASy Swiss-Prot
Match: RL3L_HUMAN (60S ribosomal protein L3-like OS=Homo sapiens GN=RPL3L PE=1 SV=3) HSP 1 Score: 201.83 bits (512), Expect = 2.329e-51 Identity = 95/155 (61.29%), Postives = 118/155 (76.13%), Query Frame = 1 Query: 10 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------HSAMTEFDRTEKDITPMGGSPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQRTQEKAKYYGRLK 456 +LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKI+++G+ ++A T +D T K ITP+GG PHYG VN D++++KGC G KKRV+TLR+SLL SR A+E I+LKFIDT+SKFGHGRFQ QEK + G K Sbjct: 239 KLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIFRIGRGPHMEDGKLVKNNASTSYDVTAKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQAVENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQK 393
BLAST of CB610616 vs. ExPASy Swiss-Prot
Match: RL3_MACFA (60S ribosomal protein L3 OS=Macaca fascicularis GN=RPL3 PE=2 SV=3) HSP 1 Score: 201.06 bits (510), Expect = 3.973e-51 Identity = 98/155 (63.23%), Postives = 121/155 (78.06%), Query Frame = 1 Query: 10 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA------SQESHSAMTEFDRTEKDITPMGGSPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQRTQEKAKYYGRLK 456 +LPRKTHRGLRKVACIGA HPARV+F+VARAGQ GYHHRTE+NKKIYK+G+ ++A T++D ++K I P+GG HYG V D++++KGC VG KKRV+TLR+SLL QT R ALE+I LKFIDT+SKFGHGRFQ +EK + G LK Sbjct: 239 KLPRKTHRGLRKVACIGARHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
BLAST of CB610616 vs. ExPASy Swiss-Prot
Match: RL3_CANGA (60S ribosomal protein L3 OS=Candida glabrata GN=RPL3 PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 5.189e-51 Identity = 97/152 (63.82%), Postives = 117/152 (76.97%), Query Frame = 1 Query: 1 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGSPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQRTQEKAKYYGRLK 456 G +LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYHHRT +N KIY++GK E ++A T FDRT+K I PMGG HYG+VN D++++KG G KKRVVTLR+SL TSR A+EE+ LK+IDT+SKFG GRFQ EK + G LK Sbjct: 234 GTKKLPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKIYRIGKGDDEGNAA-TNFDRTKKTINPMGGFVHYGMVNNDFVMVKGSIPGCKKRVVTLRKSLYTNTSRKAVEEVTLKWIDTASKFGKGRFQTPAEKHAFMGTLK 384
BLAST of CB610616 vs. ExPASy Swiss-Prot
Match: RL3_YEAST (60S ribosomal protein L3 OS=Saccharomyces cerevisiae GN=RPL3 PE=1 SV=4) HSP 1 Score: 199.519 bits (506), Expect = 1.156e-50 Identity = 95/152 (62.50%), Postives = 116/152 (76.32%), Query Frame = 1 Query: 1 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGSPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQRTQEKAKYYGRLK 456 G +LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYH RT +N KIY++GK E++ A T FDRT+K ITPMGG HYG + D++++KGC G +KR+VTLR+SL TSR ALEE+ LK+IDT+SKFG GRFQ EK + G LK Sbjct: 234 GTKKLPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEANGA-TSFDRTKKTITPMGGFVHYGEIKNDFIMVKGCIPGNRKRIVTLRKSLYTNTSRKALEEVSLKWIDTASKFGKGRFQTPAEKHAFMGTLK 384
BLAST of CB610616 vs. ExPASy Swiss-Prot
Match: RL3B_SCHPO (60S ribosomal protein L3-B OS=Schizosaccharomyces pombe GN=rpl3b PE=2 SV=2) HSP 1 Score: 195.282 bits (495), Expect = 2.180e-49 Identity = 95/152 (62.50%), Postives = 115/152 (75.66%), Query Frame = 1 Query: 1 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGSPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQRTQEKAKYYGRLK 456 G RLPRKTHRGLRKVACIGAWHPA V +TVARAG GY HRT++N KIY++G A ++ +A T+FD TEK ITPMGG YGVV D++++ G GP KRV+TLR+SLL TSR ALE + LK+IDT+SKFGHGRFQ E ++ G LK Sbjct: 234 GTKRLPRKTHRGLRKVACIGAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNASTDFDATEKRITPMGGFVRYGVVENDFVMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSLKWIDTASKFGHGRFQTPAEAKQFLGTLK 384 The following BLAST results are available for this feature:
BLAST of CB610616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >CB610616 ID=CB610616; Name=CB610616; organism=Citrus sinensis; type=EST; length=628bpback to top |