CB610616
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB610616 vs. ExPASy Swiss-Prot
Match: RL3A_SCHPO (60S ribosomal protein L3-A OS=Schizosaccharomyces pombe GN=rpl3a PE=1 SV=2) HSP 1 Score: 195.282 bits (495), Expect = 2.180e-49 Identity = 95/152 (62.50%), Postives = 115/152 (75.66%), Query Frame = 1 Query: 1 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGSPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQRTQEKAKYYGRLK 456 G RLPRKTHRGLRKVACIGAWHPA V +TVARAG GY HRT++N KIY++G A ++ +A T+FD TEK ITPMGG YGVV D++++ G GP KRV+TLR+SLL TSR ALE + LK+IDT+SKFGHGRFQ E ++ G LK Sbjct: 234 GTKRLPRKTHRGLRKVACIGAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNASTDFDATEKRITPMGGFVRYGVVENDFVMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSLKWIDTASKFGHGRFQTPAEAKQFLGTLK 384
BLAST of CB610616 vs. ExPASy Swiss-Prot
Match: RL3_DEBHA (60S ribosomal protein L3 OS=Debaryomyces hansenii GN=RPL3 PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 2.847e-49 Identity = 95/152 (62.50%), Postives = 113/152 (74.34%), Query Frame = 1 Query: 1 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGSPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQRTQEKAKYYGRLK 456 G +LPRKTHRGLRKVACIGAWHPA V +TVARAGQNG+HHRT +N K+Y++G A ES A TEFDRT+K I PMGG YG V D++L+KG G KKR+VT+R+SL TSR A E + LK+IDT+SKFG GRFQ EK + G LK Sbjct: 234 GTKKLPRKTHRGLRKVACIGAWHPANVQWTVARAGQNGFHHRTSINHKVYRVGSAGDESSGA-TEFDRTKKTINPMGGFVRYGNVKNDFMLLKGSIPGVKKRIVTIRKSLYVDTSRRATENVNLKWIDTASKFGKGRFQTPAEKHAFLGTLK 384
BLAST of CB610616 vs. ExPASy Swiss-Prot
Match: RL3_NEUCR (60S ribosomal protein L3 OS=Neurospora crassa GN=rpl-3 PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 6.343e-49 Identity = 93/152 (61.18%), Postives = 116/152 (76.32%), Query Frame = 1 Query: 1 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGSPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQRTQEKAKYYGRLK 456 G +LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KIY++GK E SA TE D T+K ITPMGG YG +N D++++KG G KKRV+TLR+S+ TSR ALE+++LK+IDTSS+FGHG FQ EK ++ G LK Sbjct: 235 GTKKLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQAGYHHRTSVNHKIYRIGKGDAED-SAATEVDVTKKKITPMGGFVRYGEINNDFVMVKGSVPGVKKRVMTLRKSMFVHTSRKALEKVELKWIDTSSEFGHGAFQTPAEKKQFQGTLK 385
BLAST of CB610616 vs. ExPASy Swiss-Prot
Match: RL3_ASPFU (60S ribosomal protein L3 OS=Aspergillus fumigatus GN=rpl3 PE=1 SV=2) HSP 1 Score: 193.741 bits (491), Expect = 6.343e-49 Identity = 92/152 (60.53%), Postives = 116/152 (76.32%), Query Frame = 1 Query: 1 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGSPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQRTQEKAKYYGRLK 456 G +LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT N K++++GK S E + A T+FD ++K ITPMGG YG V DY+++KG G KKRV+TLR++L QTSR A E+++LK+IDTSSKFGHG FQ +EK + G LK Sbjct: 235 GTKKLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSCNHKVFRIGKGSDEGN-ASTDFDISKKQITPMGGFVRYGEVKNDYIMVKGSVPGVKKRVMTLRKTLYPQTSRRATEKVELKWIDTSSKFGHGAFQTPEEKRAFMGTLK 385
BLAST of CB610616 vs. ExPASy Swiss-Prot
Match: RL3_ENCCU (60S ribosomal protein L3 OS=Encephalitozoon cuniculi GN=RPL3-1 PE=1 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.013e-46 Identity = 89/153 (58.17%), Postives = 115/153 (75.16%), Query Frame = 1 Query: 1 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGSPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQRTQEKAKYYGRLKA 459 GV + PRK+ +G+RKVACIGAWHP+RV +++ARAGQ G+H RTE NK++Y +G S + TEFD TEK I+PMGG PHYG V D++++KG VG +KRVVTLR+SLL+Q A EE+ +KF+DTSSK GHGRFQ + EK +YG KA Sbjct: 230 GVRKQPRKSRKGIRKVACIGAWHPSRVMYSIARAGQMGFHRRTEKNKRVYMIGNGSS---NIKTEFDLTEKPISPMGGFPHYGEVRNDFIMVKGAVVGARKRVVTLRKSLLRQR---AGEELVIKFVDTSSKIGHGRFQTSAEKKAFYGARKA 376
BLAST of CB610616 vs. ExPASy Swiss-Prot
Match: RL3_PIG (60S ribosomal protein L3 (Fragment) OS=Sus scrofa GN=RPL3 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.520e-26 Identity = 54/95 (56.84%), Postives = 71/95 (74.74%), Query Frame = 1 Query: 10 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESHSAMTEFDRTEKDITPMGGSPHYGVVNEDYLLI 276 +LPRKTHRGLRKVACIGAWHPAR +F+VARAGQ GYHHRTE+NKKIYK+G+ ++ T++D ++K I P+G HYG V D++++ Sbjct: 36 KLPRKTHRGLRKVACIGAWHPARXAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNXXTDYDLSDKSINPLGRFVHYGEVTNDFVML 130
BLAST of CB610616 vs. ExPASy Swiss-Prot
Match: RL3_THESM (50S ribosomal protein L3P OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rpl3p PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 7.808e-23 Identity = 54/132 (40.91%), Postives = 77/132 (58.33%), Query Frame = 1 Query: 1 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGSPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSK 396 GV K +G RKVA IG WHPARV +TV RAGQ G+HHRTE NK++ ++G+ + + + +ITP GG PHYGVV D+++I G G KR++ +R ++ R E ++ +I SK Sbjct: 233 GVKLTSHKDSKGRRKVATIGPWHPARVMWTVPRAGQMGFHHRTEFNKRLLRIGE------NGKLTLNGEKIEITPNGGFPHYGVVKNDFIMIAGTIPGAIKRIIRMRPAVRPPAKRPPAEAPQITYISRESK 358
BLAST of CB610616 vs. ExPASy Swiss-Prot
Match: RL3_PYRFU (50S ribosomal protein L3P OS=Pyrococcus furiosus GN=rpl3p PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.875e-22 Identity = 49/132 (37.12%), Postives = 78/132 (59.09%), Query Frame = 1 Query: 1 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGSPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSK 396 G+ K +G RKV IG WHPARV +TV AGQ G+HHRTE+NK++ +G+ + + + TE +ITP GG PHYG+V D+++I G G KR++ +R ++ + ++ ++ ++ SK Sbjct: 238 GIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGE-----NGKLKLDENTEIEITPKGGFPHYGIVRSDFMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYVSVESK 364
BLAST of CB610616 vs. ExPASy Swiss-Prot
Match: RL3_PYRAB (50S ribosomal protein L3P OS=Pyrococcus abyssi GN=rpl3p PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.610e-22 Identity = 49/132 (37.12%), Postives = 76/132 (57.58%), Query Frame = 1 Query: 1 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGSPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSK 396 G+ K +G RKV IG WHPARV +TV AGQ G+HHRTE+NK++ +G+ + D E +ITP GG PHYG+V D+++I G G KR++ +R ++ + ++ ++ ++ SK Sbjct: 235 GIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGE------NGKLVIDGNEIEITPKGGFPHYGIVRSDFMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYVSVESK 360
BLAST of CB610616 vs. ExPASy Swiss-Prot
Match: RL3_PYRHO (50S ribosomal protein L3P OS=Pyrococcus horikoshii GN=rpl3p PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.127e-21 Identity = 49/132 (37.12%), Postives = 76/132 (57.58%), Query Frame = 1 Query: 1 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGSPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSK 396 G+ K +G RKV IG WHPARV +TV AGQ G+HHRTE+NK++ +G+ + D E +ITP GG PHYG+V D+++I G G KR++ +R ++ + ++ ++ ++ SK Sbjct: 236 GIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGE------NGKLVIDGNEIEITPKGGFPHYGIVRGDFMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYVSVESK 361 The following BLAST results are available for this feature:
BLAST of CB610616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >CB610616 ID=CB610616; Name=CB610616; organism=Citrus sinensis; type=EST; length=628bpback to top |