CB610622
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB610622 vs. ExPASy Swiss-Prot
Match: RL7A_SULTO (50S ribosomal protein L7Ae OS=Sulfolobus tokodaii GN=rpl7ae PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.341e-12 Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = 3 Query: 153 ILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKL 467 +LD V++A ++KKG NE TK + RG ++ +V+A D E+K +PYV+VPSK+ALG ACG+ V A S + + K + ++ +E+L Sbjct: 19 VLDAVRKAKESGKIKKGTNETTKAVERGQAKLVVIATDVQPEEIVAHLPLLCEEKKIPYVYVPSKKALGEACGL--QVAAASAAIIDPGEAKDLLDEIVKRVEEL 121
BLAST of CB610622 vs. ExPASy Swiss-Prot
Match: NHP2_BOVIN (H/ACA ribonucleoprotein complex subunit 2 OS=Bos taurus GN=NHP2 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.341e-12 Identity = 37/106 (34.91%), Postives = 54/106 (50.94%), Query Frame = 3 Query: 105 VNPKAYPLADSNLIITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQ 422 +NP A PLA L + +++A KQ+++G E K +N+G +V+A DT ED+N+PYV++PSK LG A G RP V +E Q Sbjct: 31 LNPIAQPLASRRLTRKLYKCIKKAVKQKQIRRGVKEVQKFINKGEKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSKRPTCVIMVKPHEEYQ 136
BLAST of CB610622 vs. ExPASy Swiss-Prot
Match: NHP2_HUMAN (H/ACA ribonucleoprotein complex subunit 2 OS=Homo sapiens GN=NHP2 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.993e-12 Identity = 37/105 (35.24%), Postives = 53/105 (50.48%), Query Frame = 3 Query: 108 NPKAYPLADSNLIITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQ 422 NP A PLA L + +++A KQ+++G E K +N+G +V+A DT ED+N+PYV++PSK LG A G RP V +E Q Sbjct: 32 NPIAQPLASRRLTRKLYKCIKKAVKQKQIRRGVKEVQKFVNKGEKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSKRPTCVIMVKPHEEYQ 136
BLAST of CB610622 vs. ExPASy Swiss-Prot
Match: NHP2_MOUSE (H/ACA ribonucleoprotein complex subunit 2 OS=Mus musculus GN=Nhp2 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.216e-12 Identity = 37/106 (34.91%), Postives = 54/106 (50.94%), Query Frame = 3 Query: 105 VNPKAYPLADSNLIITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQ 422 +NP A PLA L + +++A KQ+++G E K +N+G +V+A DT ED+N+PYV++PSK LG A G RP V +E Q Sbjct: 31 LNPIAQPLASRRLTRKLYKCIKKAVKQKQIRRGVKEVQKFVNKGEKGIMVLAGDTLPIEVYCHLPVLCEDQNLPYVYIPSKTDLGAATGSKRPTCVIMVKPHEEYQ 136
BLAST of CB610622 vs. ExPASy Swiss-Prot
Match: NHP2_PONAB (H/ACA ribonucleoprotein complex subunit 2 OS=Pongo abelii GN=NHP2 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.897e-12 Identity = 36/105 (34.29%), Postives = 53/105 (50.48%), Query Frame = 3 Query: 108 NPKAYPLADSNLIITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQ 422 NP A PLA L + +++A KQ+++G E K +N+G +V+A DT ED+N+PYV++PSK LG A G RP V ++ Q Sbjct: 32 NPIAQPLASRRLTRKLYKCIKKAVKQKQIRRGVKEVQKFVNKGEKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSKRPTCVIMVKPHDEYQ 136
BLAST of CB610622 vs. ExPASy Swiss-Prot
Match: NHP2_YEAST (H/ACA ribonucleoprotein complex subunit 2 OS=Saccharomyces cerevisiae GN=NHP2 PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.588e-11 Identity = 41/125 (32.80%), Postives = 63/125 (50.40%), Query Frame = 3 Query: 102 AVNPKAYPLADSNLIITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRP--VIACSVTSNEASQLKTQIQQLKDAIEKLL 470 AV P A PLA L +L V++A+ K +K+G E K L +G +V+A D ED +VPY+F+PSKQ LG A RP V+ SN+ K + ++ K++ +++ Sbjct: 26 AVLPFAKPLASKKLNKKVLKTVKKASKAKNVKRGVKEVVKALRKGEKGLVVIAGDISPADVISHIPVLCEDHSVPYIFIPSKQDLGAAGATKRPTSVVFIVPGSNKKKDGKNKEEEYKESFNEVV 150
BLAST of CB610622 vs. ExPASy Swiss-Prot
Match: NHP2_XENLA (H/ACA ribonucleoprotein complex subunit 2-like protein OS=Xenopus laevis GN=nhp2 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.767e-11 Identity = 36/106 (33.96%), Postives = 51/106 (48.11%), Query Frame = 3 Query: 105 VNPKAYPLADSNLIITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQ 422 +NP A PLA L + V++A K +++G E K +N+G +VMA DT ED+ +PY +VPSK LG A G RP + +E Q Sbjct: 27 LNPVAKPLAGRKLTKKLYKCVKKAIKQKNIRRGVKEVQKFINKGEKGIVVMAGDTLPIEVYCHIPVMCEDRGIPYSYVPSKSDLGAAAGSKRPTCVILIKPHEDYQ 132
BLAST of CB610622 vs. ExPASy Swiss-Prot
Match: NHP2_DANRE (H/ACA ribonucleoprotein complex subunit 2-like protein OS=Danio rerio GN=nhp2 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.767e-11 Identity = 34/103 (33.01%), Postives = 53/103 (51.46%), Query Frame = 3 Query: 105 VNPKAYPLADSNLIITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNE 413 +NP A PLA L + V++AA KQ+++G E K +N+G + +V A DT ED+++PY +VPSK LG + G RP + ++ Sbjct: 28 INPIANPLASRKLSKKLYKCVKKAAKVKQIRRGVKEVQKFINKGETGIVVFAGDTLPIDVYCHLPIMCEDRSLPYAYVPSKVDLGSSAGSKRPTCVIMIKPHD 130
BLAST of CB610622 vs. ExPASy Swiss-Prot
Match: NHP2_ARATH (H/ACA ribonucleoprotein complex subunit 2-like protein OS=Arabidopsis thaliana GN=At5g08180 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.767e-11 Identity = 45/142 (31.69%), Postives = 65/142 (45.77%), Query Frame = 3 Query: 69 SVPATTKMSGEAVNPKAYPLADSNLIITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSV---------TSNEASQLKTQIQQLKDAIEKL 467 S+ K + P A PLA L L+Q+AA K LK+G E K++ RG V+A + E+ VPYV+VPSK+ L +A RP V T+ E ++LKT +Q+ D I++L Sbjct: 10 SIQKEKKKYAITLAPIAKPLAGKKLQKRTFKLIQKAAGKKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHLPILCEEAGVPYVYVPSKEDLAQAGATKRPTCCVLVMLKPAKGDLTAEELAKLKTDYEQVSDDIKEL 151
BLAST of CB610622 vs. ExPASy Swiss-Prot
Match: NHP2_XENTR (H/ACA ribonucleoprotein complex subunit 2-like protein OS=Xenopus tropicalis GN=nhp2 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.531e-11 Identity = 36/106 (33.96%), Postives = 51/106 (48.11%), Query Frame = 3 Query: 105 VNPKAYPLADSNLIITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQ 422 +NP A PLA L + V++A K +++G E K +N+G +VMA DT ED+ +PY +VPSK LG A G RP + +E Q Sbjct: 27 LNPIAKPLAGRKLTKKLYKCVKKAIKQKNIRRGVKEVQKFINKGEKGIVVMAGDTLPIEVYCHIPVMCEDRGIPYSYVPSKSDLGAAAGSKRPTCVILIKPHEDYQ 132 The following BLAST results are available for this feature:
BLAST of CB610622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >CB610622 ID=CB610622; Name=CB610622; organism=Citrus sinensis; type=EST; length=662bpback to top |