CB610635

Overview
NameCB610635
Unique NameCB610635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length196
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610635 vs. ExPASy Swiss-Prot
Match: ACOC_CHICK (Cytoplasmic aconitate hydratase OS=Gallus gallus GN=ACO1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.246e-13
Identity = 37/53 (69.81%), Postives = 41/53 (77.36%), Query Frame = 2
Query:    2 GDIXAVAVLSGNRNFGSXPFPLTRANYLADRSLVVAYALAGTVDIDFEKEPIG 160
            GD+ AV VLSGNRNF     P TRANYLA   LV+AYA+AGTV IDFEKEP+G
Sbjct:  524 GDLVAVGVLSGNRNFEGRVHPNTRANYLASPPLVIAYAIAGTVRIDFEKEPLG 576          
BLAST of CB610635 vs. ExPASy Swiss-Prot
Match: ACOC_HUMAN (Cytoplasmic aconitate hydratase OS=Homo sapiens GN=ACO1 PE=1 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 1.627e-13
Identity = 36/53 (67.92%), Postives = 41/53 (77.36%), Query Frame = 2
Query:    2 GDIXAVAVLSGNRNFGSXPFPLTRANYLADRSLVVAYALAGTVDIDFEKEPIG 160
            GD+ AV VLSGNRNF     P TRANYLA   LV+AYA+AGT+ IDFEKEP+G
Sbjct:  524 GDLVAVGVLSGNRNFEGRVHPNTRANYLASPPLVIAYAIAGTIRIDFEKEPLG 576          
BLAST of CB610635 vs. ExPASy Swiss-Prot
Match: ACOC_BOVIN (Cytoplasmic aconitate hydratase OS=Bos taurus GN=ACO1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.627e-13
Identity = 36/53 (67.92%), Postives = 41/53 (77.36%), Query Frame = 2
Query:    2 GDIXAVAVLSGNRNFGSXPFPLTRANYLADRSLVVAYALAGTVDIDFEKEPIG 160
            GD+ AV VLSGNRNF     P TRANYLA   LV+AYA+AGT+ IDFEKEP+G
Sbjct:  524 GDLVAVGVLSGNRNFEGRVHPNTRANYLASPPLVIAYAIAGTIRIDFEKEPLG 576          
BLAST of CB610635 vs. ExPASy Swiss-Prot
Match: ACON_STAES (Aconitate hydratase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=acnA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.377e-12
Identity = 35/55 (63.64%), Postives = 40/55 (72.73%), Query Frame = 2
Query:    5 DIXAVAVLSGNRNFGSXPFPLTRANYLADRSLVVAYALAGTVDIDFEKEPIGTGE 169
            D+   +VLSGNRNF     PL +ANYLA   LVVAYALAGTVDID + EPIG G+
Sbjct:  531 DLLVTSVLSGNRNFEGRIHPLVKANYLASPQLVVAYALAGTVDIDLQNEPIGKGK 585          
BLAST of CB610635 vs. ExPASy Swiss-Prot
Match: ACON_STAEQ (Aconitate hydratase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=acnA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.377e-12
Identity = 35/55 (63.64%), Postives = 40/55 (72.73%), Query Frame = 2
Query:    5 DIXAVAVLSGNRNFGSXPFPLTRANYLADRSLVVAYALAGTVDIDFEKEPIGTGE 169
            D+   +VLSGNRNF     PL +ANYLA   LVVAYALAGTVDID + EPIG G+
Sbjct:  531 DLLVTSVLSGNRNFEGRIHPLVKANYLASPQLVVAYALAGTVDIDLQNEPIGKGK 585          
BLAST of CB610635 vs. ExPASy Swiss-Prot
Match: ACON_STAAW (Aconitate hydratase OS=Staphylococcus aureus (strain MW2) GN=acnA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.799e-12
Identity = 35/54 (64.81%), Postives = 39/54 (72.22%), Query Frame = 2
Query:    5 DIXAVAVLSGNRNFGSXPFPLTRANYLADRSLVVAYALAGTVDIDFEKEPIGTG 166
            D+   +VLSGNRNF     PL +ANYLA   LVVAYALAGTVDID + EPIG G
Sbjct:  531 DLLVTSVLSGNRNFEGRIHPLVKANYLASPQLVVAYALAGTVDIDLQNEPIGKG 584          
BLAST of CB610635 vs. ExPASy Swiss-Prot
Match: ACON_STAAS (Aconitate hydratase OS=Staphylococcus aureus (strain MSSA476) GN=acnA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.799e-12
Identity = 35/54 (64.81%), Postives = 39/54 (72.22%), Query Frame = 2
Query:    5 DIXAVAVLSGNRNFGSXPFPLTRANYLADRSLVVAYALAGTVDIDFEKEPIGTG 166
            D+   +VLSGNRNF     PL +ANYLA   LVVAYALAGTVDID + EPIG G
Sbjct:  531 DLLVTSVLSGNRNFEGRIHPLVKANYLASPQLVVAYALAGTVDIDLQNEPIGKG 584          
BLAST of CB610635 vs. ExPASy Swiss-Prot
Match: ACON_STAAN (Aconitate hydratase OS=Staphylococcus aureus (strain N315) GN=acnA PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.799e-12
Identity = 35/54 (64.81%), Postives = 39/54 (72.22%), Query Frame = 2
Query:    5 DIXAVAVLSGNRNFGSXPFPLTRANYLADRSLVVAYALAGTVDIDFEKEPIGTG 166
            D+   +VLSGNRNF     PL +ANYLA   LVVAYALAGTVDID + EPIG G
Sbjct:  531 DLLVTSVLSGNRNFEGRIHPLVKANYLASPQLVVAYALAGTVDIDLQNEPIGKG 584          
BLAST of CB610635 vs. ExPASy Swiss-Prot
Match: ACON_STAAM (Aconitate hydratase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=acnA PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.799e-12
Identity = 35/54 (64.81%), Postives = 39/54 (72.22%), Query Frame = 2
Query:    5 DIXAVAVLSGNRNFGSXPFPLTRANYLADRSLVVAYALAGTVDIDFEKEPIGTG 166
            D+   +VLSGNRNF     PL +ANYLA   LVVAYALAGTVDID + EPIG G
Sbjct:  531 DLLVTSVLSGNRNFEGRIHPLVKANYLASPQLVVAYALAGTVDIDLQNEPIGKG 584          
BLAST of CB610635 vs. ExPASy Swiss-Prot
Match: ACON_STAAC (Aconitate hydratase OS=Staphylococcus aureus (strain COL) GN=acnA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.799e-12
Identity = 35/54 (64.81%), Postives = 39/54 (72.22%), Query Frame = 2
Query:    5 DIXAVAVLSGNRNFGSXPFPLTRANYLADRSLVVAYALAGTVDIDFEKEPIGTG 166
            D+   +VLSGNRNF     PL +ANYLA   LVVAYALAGTVDID + EPIG G
Sbjct:  531 DLLVTSVLSGNRNFEGRIHPLVKANYLASPQLVVAYALAGTVDIDLQNEPIGKG 584          
The following BLAST results are available for this feature:
BLAST of CB610635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
ACOC_CHICK1.246e-1369.81Cytoplasmic aconitate hydratase OS=Gallus gallus G... [more]
ACOC_HUMAN1.627e-1367.92Cytoplasmic aconitate hydratase OS=Homo sapiens GN... [more]
ACOC_BOVIN1.627e-1367.92Cytoplasmic aconitate hydratase OS=Bos taurus GN=A... [more]
ACON_STAES1.377e-1263.64Aconitate hydratase OS=Staphylococcus epidermidis ... [more]
ACON_STAEQ1.377e-1263.64Aconitate hydratase OS=Staphylococcus epidermidis ... [more]
ACON_STAAW1.799e-1264.81Aconitate hydratase OS=Staphylococcus aureus (stra... [more]
ACON_STAAS1.799e-1264.81Aconitate hydratase OS=Staphylococcus aureus (stra... [more]
ACON_STAAN1.799e-1264.81Aconitate hydratase OS=Staphylococcus aureus (stra... [more]
ACON_STAAM1.799e-1264.81Aconitate hydratase OS=Staphylococcus aureus (stra... [more]
ACON_STAAC1.799e-1264.81Aconitate hydratase OS=Staphylococcus aureus (stra... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IIaF_C09 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIaF_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610635 ID=CB610635; Name=CB610635; organism=Citrus sinensis; type=EST; length=196bp
GGGTGACATTNNTGCCGTTGCTGTGCTTTCCGGTAATCGGAACTTTGGAT
CNNGTCCCTTTCCTTTGACAAGAGCTAACTATCTTGCAGATCGATCATTA
GTTGTTGCTTATGCCCTTGCTGGCACAGTTGACATAGACTTTGAAAAGGA
GCCAATTGGAACTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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