CB610685

Overview
NameCB610685
Unique NameCB610685
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610685 vs. ExPASy Swiss-Prot
Match: NTF4_TOBAC (Mitogen-activated protein kinase homolog NTF4 OS=Nicotiana tabacum GN=NTF4 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.456e-15
Identity = 56/168 (33.33%), Postives = 85/168 (50.60%), Query Frame = 2
Query:  224 LGHGNGGTVYKVQHRCTLKIYALKVVHGDADPTV-RRQVFREMEILRRTDSPFIVQCFGIFEKPS----GDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 712
            +G G  G V    +  T +  A+K +    D  +  ++  RE+++LR  D   IV    I   P      D+ I  E MD+  L  ++  N   SE    +   QIL+GL Y+H   ++HRD+KPSNLL+ N N  +KI DFG++++   + D    YV T  Y +PE
Sbjct:   66 IGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENIVAIRDIIPPPQREAFNDVYIAYELMDTD-LHQIIRSNQGLSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLL-NANCDLKICDFGLARVTSET-DFMTEYVVTRWYRAPE 230          
BLAST of CB610685 vs. ExPASy Swiss-Prot
Match: NRK_MOUSE (Nik-related protein kinase OS=Mus musculus GN=Nrk PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.456e-15
Identity = 52/151 (34.44%), Postives = 86/151 (56.95%), Query Frame = 2
Query:  344 EMEILRRTD-SPFIVQCFGIFEK--PSG---DIAILMEYMDSGTLDTL--LNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXXDIWS 772
            E+ +LR+      IV  +G F K  P G    + ++ME   +G++  +  + +N +  E  +A+I  +IL+GL++LH H++IHRDIK  N+L+  ++ +VKI DFGVS  + R+    NS++GT  +M+PE    D           D+WS
Sbjct:   93 ELNLLRKYSFHKNIVTFYGAFFKLNPPGHQHQLWMVMELCAAGSVTDVVRMTRNQSLKEDWIAYICREILQGLAHLHAHQVIHRDIKGQNVLL-THDAEVKIVDFGVSAQVSRTNGRRNSFIGTPYWMAPEVIHCDEDPRCSYDYRSDVWS 242          
BLAST of CB610685 vs. ExPASy Swiss-Prot
Match: NEK3_HUMAN (Serine/threonine-protein kinase Nek3 OS=Homo sapiens GN=NEK3 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 9.456e-15
Identity = 54/192 (28.12%), Postives = 96/192 (50.00%), Query Frame = 2
Query:  203 DLEKLQVLGHGNGGTVYKVQHRCTLKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLN--KNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXXDIWS 772
            D   L+++G G+ G    VQH  + +++A+K +      +  +   +E  +L +   P IV     FE   G + I+MEY D G L   +   K   F E  + +  +Q+  G++++H  +++HRDIK  N+ +  N  +VK+ DFG ++++   +    +YVGT  Y+ PE ++             DIWS
Sbjct:    3 DYMVLRMIGEGSFGRALLVQHESSNQMFAMKEIRLPKSFSNTQNSRKEAVLLAKMKHPNIVAFKESFEA-EGHLYIVMEYCDGGDLMQKIKQQKGKLFPEDMILNWFTQMCLGVNHIHKKRVLHRDIKSKNIFLTQNG-KVKLGDFGSARLLSNPMAFACTYVGTPYYVPPEIWE-----NLPYNNKSDIWS 187          
BLAST of CB610685 vs. ExPASy Swiss-Prot
Match: MPK5_ORYSJ (Mitogen-activated protein kinase 5 OS=Oryza sativa subsp. japonica GN=MPK5 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.456e-15
Identity = 58/171 (33.92%), Postives = 87/171 (50.88%), Query Frame = 2
Query:  224 LGHGNGGTVYKVQHRCTLKIYALKVV----HGDADPTVRRQVFREMEILRRTDSPFIVQCFGIFEKPS----GDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 712
            +G G  G V  V +  T ++ A+K +    + D D    ++  RE+++LR  D   I+    +   P      D+ I  E MD+  L  ++  N   SE    +   QIL+GL Y+H   +IHRD+KPSNLL+ N N  +KI DFG+++    S D    YV T  Y +PE
Sbjct:   42 IGRGAYGIVCSVMNFETREMVAIKKIANAFNNDMDA---KRTLREIKLLRHLDHENIIGIRDVIPPPIPQAFNDVYIATELMDTD-LHHIIRSNQELSEEHCQYFLYQILRGLKYIHSANVIHRDLKPSNLLL-NANCDLKICDFGLARPSSES-DMMTEYVVTRWYRAPE 206          
BLAST of CB610685 vs. ExPASy Swiss-Prot
Match: MPK5_ORYSI (Mitogen-activated protein kinase 5 OS=Oryza sativa subsp. indica GN=MPK5 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 9.456e-15
Identity = 58/171 (33.92%), Postives = 87/171 (50.88%), Query Frame = 2
Query:  224 LGHGNGGTVYKVQHRCTLKIYALKVV----HGDADPTVRRQVFREMEILRRTDSPFIVQCFGIFEKPS----GDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 712
            +G G  G V  V +  T ++ A+K +    + D D    ++  RE+++LR  D   I+    +   P      D+ I  E MD+  L  ++  N   SE    +   QIL+GL Y+H   +IHRD+KPSNLL+ N N  +KI DFG+++    S D    YV T  Y +PE
Sbjct:   42 IGRGAYGIVCSVMNFETREMVAIKKIANAFNNDMDA---KRTLREIKLLRHLDHENIIGIRDVIPPPIPQAFNDVYIATELMDTD-LHHIIRSNQELSEEHCQYFLYQILRGLKYIHSANVIHRDLKPSNLLL-NANCDLKICDFGLARPSSES-DMMTEYVVTRWYRAPE 206          
BLAST of CB610685 vs. ExPASy Swiss-Prot
Match: KPCA_RABIT (Protein kinase C alpha type OS=Oryctolagus cuniculus GN=PRKCA PE=2 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 9.456e-15
Identity = 52/177 (29.38%), Postives = 89/177 (50.28%), Query Frame = 2
Query:  191 IAYSDLEKLQVLGHGNGGTVYKVQHRCTLKIYALKVVHGDA---DPTVRRQVFREMEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 712
            +  +D   L VLG G+ G V     + T ++YA+K++  D    D  V   +  +  +      PF+ Q    F+     +  +MEY++ G L   + + G F EP+    A++I  GL +LH   II+RD+K  N+++++    +KIADFG+ K          ++ GT  Y++PE
Sbjct:  334 VKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALMDKPPFLTQLHSCFQTVDR-LYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEG-HIKIADFGMCKEHMMDGVTTRTFCGTPDYIAPE 508          
BLAST of CB610685 vs. ExPASy Swiss-Prot
Match: KPC1_DROME (Protein kinase C, brain isozyme OS=Drosophila melanogaster GN=Pkc53E PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 9.456e-15
Identity = 53/177 (29.94%), Postives = 91/177 (51.41%), Query Frame = 2
Query:  191 IAYSDLEKLQVLGHGNGGTVYKVQHRCTLKIYALKVVHGDA---DPTVRRQVFREMEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 712
            I  +D   ++VLG G+ G V   + + + ++YA+K++  D    D  V   +  +  +      PF+VQ    F+     +  +MEY++ G L   + + G F EP     A++I  GL +LH   I++RD+K  N+L++ +   VKIADFG+ K          ++ GT  Y++PE
Sbjct:  345 IRATDFNFIKVLGKGSFGKVLLAERKGSEELYAIKILKKDVIIQDDDVECTMIEKRVLALGEKPPFLVQLHSCFQTMDR-LFFVMEYVNGGDLMFQIQQFGKFKEPVAVFYAAEIAAGLFFLHTKGILYRDLKLDNVLLDADG-HVKIADFGMCKENIVGDKTTKTFCGTPDYIAPE 519          
BLAST of CB610685 vs. ExPASy Swiss-Prot
Match: HOG1_COCMI (Mitogen-activated protein kinase HOG1 OS=Cochliobolus miyabeanus GN=HOG1 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.456e-15
Identity = 51/167 (30.54%), Postives = 89/167 (53.29%), Query Frame = 2
Query:  215 LQVLGHGNGGTVYKVQHRCTLKIYALK-VVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 712
            LQ++G G  G V   + + T +  A+K ++   + P + ++ +RE+++L+      I+    IF  P  DI  + E + +     L ++     +  + +   QIL+GL Y+H   ++HRD+KPSN+LV N N  +KI DFG+++I    +     YV T  Y +PE
Sbjct:   23 LQLVGMGAFGLVCSAKDQLTNQAVAVKKIMKPFSTPVLSKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELLGTDLHRLLTSR--PLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILV-NENCDLKICDFGLARIQDPQM---TGYVSTRYYRAPE 183          
BLAST of CB610685 vs. ExPASy Swiss-Prot
Match: CIPKB_ARATH (CBL-interacting serine/threonine-protein kinase 11 OS=Arabidopsis thaliana GN=CIPK11 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.456e-15
Identity = 51/170 (30.00%), Postives = 88/170 (51.76%), Query Frame = 2
Query:  218 QVLGHGNGGTVYKVQHRCTLKIYALKVVHGD---ADPTVRRQVFREMEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKI--MCRSLDACNSYVGTCAYMSPE 712
            ++LG G    V+  + R T +  A+K+++      +P +   + RE+ I+RR   P IV+   +    S  I   ME++  G L   ++K+G  SE        Q++  + Y H   + HRD+KP NLL++ N   +K++DFG+S +    R     ++  GT AY++PE
Sbjct:   25 KLLGCGAFAKVFHARDRRTGQSVAVKILNKKKLLTNPALANNIKREISIMRRLSHPNIVKLHEVMATKS-KIFFAMEFVKGGELFNKISKHGRLSEDLSRRYFQQLISAVGYCHARGVYHRDLKPENLLIDENG-NLKVSDFGLSALTDQIRPDGLLHTLCGTPAYVAPE 192          
BLAST of CB610685 vs. ExPASy Swiss-Prot
Match: CDC2H_THEPA (Cell division control protein 2 homolog OS=Theileria parva GN=CRK2 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.456e-15
Identity = 51/171 (29.82%), Postives = 83/171 (48.54%), Query Frame = 2
Query:  212 KLQVLGHGNGGTVYKVQHR----CTLKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 712
            K++ +G G  G VYK Q+     C LK    K+   + D  +     RE+ +L+    P IV    +       + ++ EY+D      L   +G            QIL+G+SY H H+I+HRD+KP NLL+N   + +K+ADFG+++     + +    V T  Y +P+
Sbjct:    6 KMEKIGEGTYGVVYKAQNNHGEICALK----KIRVEEEDEGIPSTAIREISLLKELHHPNIVWLRDVIHSEKC-LTLVFEYLDQDLKKLLDACDGGLEPTTAKSFLYQILRGISYCHDHRILHRDLKPQNLLINREGV-LKLADFGLARAFAIPVRSYTHEVVTLWYRAPD 170          
The following BLAST results are available for this feature:
BLAST of CB610685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NTF4_TOBAC9.456e-1533.33Mitogen-activated protein kinase homolog NTF4 OS=N... [more]
NRK_MOUSE9.456e-1534.44Nik-related protein kinase OS=Mus musculus GN=Nrk ... [more]
NEK3_HUMAN9.456e-1528.13Serine/threonine-protein kinase Nek3 OS=Homo sapie... [more]
MPK5_ORYSJ9.456e-1533.92Mitogen-activated protein kinase 5 OS=Oryza sativa... [more]
MPK5_ORYSI9.456e-1533.92Mitogen-activated protein kinase 5 OS=Oryza sativa... [more]
KPCA_RABIT9.456e-1529.38Protein kinase C alpha type OS=Oryctolagus cunicul... [more]
KPC1_DROME9.456e-1529.94Protein kinase C, brain isozyme OS=Drosophila mela... [more]
HOG1_COCMI9.456e-1530.54Mitogen-activated protein kinase HOG1 OS=Cochliobo... [more]
CIPKB_ARATH9.456e-1530.00CBL-interacting serine/threonine-protein kinase 11... [more]
CDC2H_THEPA9.456e-1529.82Cell division control protein 2 homolog OS=Theiler... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IIIaF_D04 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIIaF_D04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610685 ID=CB610685; Name=CB610685; organism=Citrus sinensis; type=EST; length=813bp
GCGGGGATTTCTTGATAATCATAACAAAAAGATAGATATAATAACAATAA
TGGCCGTCGTAAAGCAACGTCGCCAACTCAATCTTCGTCTCCCTATGCCT
GAACCTTCGGAGCGGTGCCTGCGTTTTCCTTTGGCCCTCCCTCCCACTGC
CCCCAACACTAATAACAACACCACCGCCACCACCGCCGCCATCGCCTACT
CTGATCTTGAGAAACTTCAAGTCCTTGGCCACGGAAACGGTGGAACAGTC
TACAAAGTCCAACACAGATGCACCCTCAAAATCTACGCCCTCAAAGTTGT
CCATGGCGACGCTGACCCCACCGTGCGCCGCCAAGTCTTCCGTGAAATGG
AAATCCTCCGCCGCACTGACTCTCCTTTCATTGTTCAGTGCTTTGGTATA
TTCGAAAAGCCTTCTGGTGACATCGCTATTTTGATGGAGTACATGGATTC
AGGCACCCTCGATACTTTGTTGAACAAAAACGGCACCTTTTCGGAGCCTA
AGCTTGCTCACATAGCCTCTCAAATTCTCAAAGGTTTGAGTTATTTGCAT
GGCCATAAAATCATTCATCGAGATATTAAGCCATCCAATTTACTGGTTAA
TAACAACAACATGCAAGTGAAAATAGCCGATTTTGGTGTTAGTAAAATCA
TGTGCCGTTCTTTGGATGCTTGTAATTCTTATGTGGGTACTTGTGCTTAT
ATGAGTCCTGAAAGATTTGATCCCGATGCCTACGGAGGGAATTACAATGG
TTATGCTGGAGATATTTGGAGCTTGGGGCTTACTTTGTTGGAGCTTTATT
TGGGTCATTTTCC
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