CB610755

Overview
NameCB610755
Unique NameCB610755
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610755 vs. ExPASy Swiss-Prot
Match: YHFR_SALTI (Uncharacterized protein yfhR OS=Salmonella typhi GN=yhfR PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.143e-18
Identity = 56/170 (32.94%), Postives = 94/170 (55.29%), Query Frame = 1
Query:  133 KSYSITPSRLRLIYEDVWLRSSDGVCLHAWFIKLF---PDCRGPTILFFQENAGNIAHRLEMVRIMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGG-----AVG-----AVLTKNNPDKVAALILENTFTSILDMAGVLLP 603
            K Y  TP+      E +   + DG  LH WFI      P+    T++    NAGN++    +V  + +R + N+FM  YRG+GES+G PSQ G+  D ++A++++  R D++  R+V+ G+SLGG     AVG     A +   +   + A++L++TF+S   +A  ++P
Sbjct:   40 KVYGPTPAEA----ESITFTAKDGTHLHGWFIPTAFGRPENAVATVIHVHGNAGNMSAHWPLVSWLPER-NVNLFMFDYRGFGESEGTPSQEGLLNDTKSAIDYVRHRADVNPERLVLLGQSLGGNNVLAAVGHCVGCANMRYADQAGIRAIVLDSTFSSYSSIANQMIP 204          
BLAST of CB610755 vs. ExPASy Swiss-Prot
Match: YFHR_SALTY (Uncharacterized protein yfhR OS=Salmonella typhimurium GN=yfhR PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.546e-18
Identity = 57/170 (33.53%), Postives = 93/170 (54.71%), Query Frame = 1
Query:  133 KSYSITPSRLRLIYEDVWLRSSDGVCLHAWFIKLF---PDCRGPTILFFQENAGNIAHRLEMVRIMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGG-----AVG-----AVLTKNNPDKVAALILENTFTSILDMAGVLLP 603
            K Y  TP+      E +   + DG  LH WFI      P+    T++    NAGN++    +V  + +R + N+FM  YRG+GES+G PSQ G+  D ++A++++  R D++  R+V+ G+SLGG     AVG     A +   +   + A+IL++TF S   +A  ++P
Sbjct:   40 KVYGPTPAEA----ESITFTAKDGTHLHGWFIPTAFGRPENAVATVIHVHGNAGNMSAHWPLVSWLPER-NVNLFMFDYRGFGESEGTPSQEGLLDDTKSAIDYVRHRADVNPERLVLLGQSLGGNNVLAAVGHCVGCANMRYADQAGIRAIILDSTFLSYSSIANQMIP 204          
The following BLAST results are available for this feature:
BLAST of CB610755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
YHFR_SALTI1.143e-1832.94Uncharacterized protein yfhR OS=Salmonella typhi G... [more]
YFHR_SALTY2.546e-1833.53Uncharacterized protein yfhR OS=Salmonella typhimu... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0002_IaF_C11 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IaF_C11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610755 ID=CB610755; Name=CB610755; organism=Citrus sinensis; type=EST; length=623bp
GGGGACGGCAGCATGGTGTCGTTCGTGAATGCATTGTTGTACGGAGTGGG
TGGCATAGTGATGGCCGGGATGGCACTGTTGGTGGCTTTCCAAGAGAAGC
TTGTTTACGTTCCGGTTCTGCCGGGTCTGACCAAATCCTACTCGATTACC
CCGTCCCGGCTCCGGCTTATTTACGAGGATGTCTGGCTCCGATCCTCTGA
TGGCGTTTGTCTCCACGCCTGGTTCATCAAGCTTTTTCCCGATTGCCGAG
GTCCAACCATTTTGTTTTTTCAAGAAAATGCTGGCAATATTGCACACCGT
CTTGAAATGGTTCGCATAATGTTACAAAGGTTGCACTGCAATGTATTCAT
GCTTTCATATCGTGGTTATGGAGAAAGTGATGGCTATCCTTCTCAGCATG
GAATTACAAGGGATGCTCAGGCAGCATTGGAGCATCTTTCTCAAAGGACC
GATATAGACACGACTAGAATAGTTGTATTTGGGAGATCACTAGGAGGTGC
CGTTGGAGCTGTGCTTACTAAGAATAATCCGGATAAGGTCGCTGCACTGA
TACTGGAGAATACTTTCACATCGATACTGGACATGGCTGGAGTTCTTCTG
CCATTCCTGAAGTGGTTTATTGG
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