CB610757

Overview
NameCB610757
Unique NameCB610757
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: HOX4_ORYSJ (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica GN=HOX4 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.119e-18
Identity = 45/68 (66.18%), Postives = 56/68 (82.35%), Query Frame = 1
Query:  124 SDEQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSL 327
            S EQ+R LE  FE E+ KLEP +K ++A +LGLQPRQVA+WFQN+RARWK+KQ+E DYA LR +YDSL
Sbjct:   56 SVEQVRALERSFEVEN-KLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSL 122          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: HOX4_ORYSI (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica GN=HOX4 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.119e-18
Identity = 45/68 (66.18%), Postives = 56/68 (82.35%), Query Frame = 1
Query:  124 SDEQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSL 327
            S EQ+R LE  FE E+ KLEP +K ++A +LGLQPRQVA+WFQN+RARWK+KQ+E DYA LR +YDSL
Sbjct:   56 SVEQVRALERSFEVEN-KLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSL 122          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: HAT5_ARATH (Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana GN=HAT5 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.119e-18
Identity = 43/70 (61.43%), Postives = 56/70 (80.00%), Query Frame = 1
Query:  130 EQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSLASGF 339
            EQ+ LLE  FE+E+ KLEP +K Q+A +LGLQPRQVA+WFQN+RARWK+KQ+E DY  L++ YD L S +
Sbjct:   75 EQVHLLEKSFETEN-KLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSTYDQLLSNY 143          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: HOX5_ORYSJ (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. japonica GN=HOX5 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.253e-18
Identity = 40/68 (58.82%), Postives = 57/68 (83.82%), Query Frame = 1
Query:  130 EQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSLAS 333
            EQ+++LE  FE E+ KLEP +K ++A  LG+ PRQVA+WFQN+RARWK+KQ+EHD+ +L+A YD+LA+
Sbjct:   93 EQVQMLERSFEEEN-KLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDALAA 159          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: HOX5_ORYSI (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. indica GN=HOX5 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.253e-18
Identity = 40/68 (58.82%), Postives = 57/68 (83.82%), Query Frame = 1
Query:  130 EQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSLAS 333
            EQ+++LE  FE E+ KLEP +K ++A  LG+ PRQVA+WFQN+RARWK+KQ+EHD+ +L+A YD+LA+
Sbjct:   93 EQVQMLERSFEEEN-KLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDALAA 159          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: ATHB6_ARATH (Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana GN=ATHB-6 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.253e-18
Identity = 43/72 (59.72%), Postives = 55/72 (76.39%), Query Frame = 1
Query:  124 SDEQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSLASGF 339
            S  Q++ LE  FE E+ KLEP +K+++A ELGLQPRQVA+WFQN+RARWK+KQ+E DY  L+  YDSL   F
Sbjct:   67 SINQVKALEKNFELEN-KLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKTQYDSLRHNF 137          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: ATHB5_ARATH (Homeobox-leucine zipper protein ATHB-5 OS=Arabidopsis thaliana GN=ATHB-5 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.472e-18
Identity = 41/66 (62.12%), Postives = 56/66 (84.85%), Query Frame = 1
Query:  130 EQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSL 327
            EQ++ LE  FE ++ KLEP +K+++A ELGLQPRQVAIWFQN+RARWK+KQ+E DY  L++N+D+L
Sbjct:   79 EQVKALEKNFEIDN-KLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSNFDAL 143          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: ATB16_ARATH (Homeobox-leucine zipper protein ATHB-16 OS=Arabidopsis thaliana GN=ATHB-16 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 9.472e-18
Identity = 42/70 (60.00%), Postives = 54/70 (77.14%), Query Frame = 1
Query:  130 EQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSLASGF 339
            +Q++ LE  FE E+ KLEP +K ++A ELGLQPRQVA+WFQN+RARWK+KQ+E DY  L+  YDSL   F
Sbjct:   66 DQVKALEKNFELEN-KLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKGQYDSLRHNF 134          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: HOX25_ORYSJ (Homeobox-leucine zipper protein HOX25 OS=Oryza sativa subsp. japonica GN=HOX25 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.237e-17
Identity = 40/69 (57.97%), Postives = 53/69 (76.81%), Query Frame = 1
Query:  130 EQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSLASG 336
            EQ+R LE  FE E  KLEP +K ++A  LG+ PRQVA+WFQN+RARWK+KQ+E D+ +LRA +D L +G
Sbjct:   89 EQVRALERSFEEEKRKLEPERKSELARRLGIAPRQVAVWFQNRRARWKTKQLELDFDRLRAAHDELLAG 157          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: HOX25_ORYSI (Homeobox-leucine zipper protein HOX25 OS=Oryza sativa subsp. indica GN=HOX25 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.237e-17
Identity = 40/69 (57.97%), Postives = 53/69 (76.81%), Query Frame = 1
Query:  130 EQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSLASG 336
            EQ+R LE  FE E  KLEP +K ++A  LG+ PRQVA+WFQN+RARWK+KQ+E D+ +LRA +D L +G
Sbjct:   29 EQVRALERSFEEEKRKLEPERKSELARRLGIAPRQVAVWFQNRRARWKTKQLELDFDRLRAAHDELLAG 97          
The following BLAST results are available for this feature:
BLAST of CB610757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
HOX4_ORYSJ1.119e-1866.18Homeobox-leucine zipper protein HOX4 OS=Oryza sati... [more]
HOX4_ORYSI1.119e-1866.18Homeobox-leucine zipper protein HOX4 OS=Oryza sati... [more]
HAT5_ARATH1.119e-1861.43Homeobox-leucine zipper protein HAT5 OS=Arabidopsi... [more]
HOX5_ORYSJ7.253e-1858.82Homeobox-leucine zipper protein HOX5 OS=Oryza sati... [more]
HOX5_ORYSI7.253e-1858.82Homeobox-leucine zipper protein HOX5 OS=Oryza sati... [more]
ATHB6_ARATH7.253e-1859.72Homeobox-leucine zipper protein ATHB-6 OS=Arabidop... [more]
ATHB5_ARATH9.472e-1862.12Homeobox-leucine zipper protein ATHB-5 OS=Arabidop... [more]
ATB16_ARATH9.472e-1860.00Homeobox-leucine zipper protein ATHB-16 OS=Arabido... [more]
HOX25_ORYSJ1.237e-1757.97Homeobox-leucine zipper protein HOX25 OS=Oryza sat... [more]
HOX25_ORYSI1.237e-1757.97Homeobox-leucine zipper protein HOX25 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0002_IaF_D04 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IaF_D04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610757 ID=CB610757; Name=CB610757; organism=Citrus sinensis; type=EST; length=707bp
GCGGGGGAGCTCCGATCACAATTTCATAAAATCAAAATGATTGAGAGAAG
AAAAGATGACTCTGCTGCTTCACCAGAAGCAAAAAGGAAGAAGAAGAGCA
AAATGAAGAACAAGAGAAGGTTTAGTGATGAACAAATAAGGTTGCTGGAG
TCCATATTCGAATCAGAGTCCACGAAGCTTGAACCAAGGAAGAAGATGCA
AGTAGCAACGGAGCTAGGGTTGCAGCCTCGCCAGGTAGCTATATGGTTTC
AGAACAAAAGAGCTAGATGGAAATCAAAACAGATTGAGCATGATTATGCT
CAACTCAGAGCCAACTATGATAGTTTGGCATCTGGTTTTGAATCCTTGAT
CAAAGAGAAGGAGTCCCTGCTCTTAGAGTTGCAAATGCTGAATGAACAGC
TGGGAAAATCGGACGATGAAATTAATGGCGTCGGCAAGGACTTGAAAAGA
AGTGATTGGAGCAGTTCAAACAGAGGAAATAATAATGATAATAATGACAA
CAACAGAATCATAGATGATTTTATAGCATCATCTGAAAAATGGTTCAATG
AGGACTCAGGTGGCCTCTTAGACCCGTCCACAAGCAGCAGTTCACAGTCA
CACTGGTTAAACTTCTGGGTTTAAATTGATCGATCACAGTACCTTGGAGA
AGCTAATATACAAATTTATTTCTATCTATTTTGTATTCTATTGCAATATA
TCATGAG
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