CB610757

Overview
NameCB610757
Unique NameCB610757
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: HOX16_ORYSJ (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. japonica GN=HOX16 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.110e-17
Identity = 40/66 (60.61%), Postives = 56/66 (84.85%), Query Frame = 1
Query:  130 EQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSL 327
            EQ+ LLE  FE E+ KLEP +K ++A +LGLQPRQVA+WFQN+RARWK+KQ+E D+ +L+A++D+L
Sbjct:   84 EQVHLLERSFEEEN-KLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDFDRLKASFDAL 148          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: HOX16_ORYSI (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. indica GN=HOX16 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.110e-17
Identity = 40/66 (60.61%), Postives = 56/66 (84.85%), Query Frame = 1
Query:  130 EQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSL 327
            EQ+ LLE  FE E+ KLEP +K ++A +LGLQPRQVA+WFQN+RARWK+KQ+E D+ +L+A++D+L
Sbjct:   86 EQVHLLERSFEEEN-KLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDFDRLKASFDAL 150          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: HOX13_ORYSJ (Homeobox-leucine zipper protein HOX13 OS=Oryza sativa subsp. japonica GN=HOX13 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.701e-17
Identity = 39/66 (59.09%), Postives = 56/66 (84.85%), Query Frame = 1
Query:  130 EQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSL 327
            EQ+R LE  F++++ KL+P +K ++A +LGLQPRQVA+WFQN+RARWK+KQ+E D+A LRA +D+L
Sbjct:   79 EQVRALERSFDTDN-KLDPDRKARIARDLGLQPRQVAVWFQNRRARWKTKQLERDFAALRARHDAL 143          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: HAT7_ARATH (Homeobox-leucine zipper protein HAT7 OS=Arabidopsis thaliana GN=HAT7 PE=2 SV=4)

HSP 1 Score: 88.1965 bits (217), Expect = 4.701e-17
Identity = 42/68 (61.76%), Postives = 51/68 (75.00%), Query Frame = 1
Query:  130 EQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSLAS 333
            EQ+R LE  FE    KLEP +KMQ+A  LGLQPRQ+AIWFQN+RARWK+KQ+E DY  L+  +D L S
Sbjct:  122 EQVRALEKSFEL-GNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLERDYDSLKKQFDVLKS 188          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: ATB13_ARATH (Homeobox-leucine zipper protein ATHB-13 OS=Arabidopsis thaliana GN=ATHB-13 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.333e-16
Identity = 40/66 (60.61%), Postives = 51/66 (77.27%), Query Frame = 1
Query:  130 EQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSL 327
            EQ++ LE  FE    KLEP +KMQ+A  LGLQPRQ+AIWFQN+RARWK+KQ+E DY  L+  +D+L
Sbjct:   92 EQVKTLEKNFEL-GNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDTLKRQFDTL 156          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: HOX8_ORYSJ (Homeobox-leucine zipper protein HOX8 OS=Oryza sativa subsp. japonica GN=HOX8 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.198e-16
Identity = 38/66 (57.58%), Postives = 54/66 (81.82%), Query Frame = 1
Query:  130 EQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSL 327
            EQ+R LE  FE+++ KL+P +K ++A +L L PRQVA+WFQN+RARWK+KQIE D+A LR+ +D+L
Sbjct:   72 EQVRALERSFEADN-KLDPERKARIARDLRLHPRQVAVWFQNRRARWKTKQIERDFAALRSRHDAL 136          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: HOX8_ORYSI (Homeobox-leucine zipper protein HOX8 OS=Oryza sativa subsp. indica GN=HOX8 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.198e-16
Identity = 38/66 (57.58%), Postives = 54/66 (81.82%), Query Frame = 1
Query:  130 EQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSL 327
            EQ+R LE  FE+++ KL+P +K ++A +L L PRQVA+WFQN+RARWK+KQIE D+A LR+ +D+L
Sbjct:   48 EQVRALERSFEADN-KLDPERKARIARDLRLHPRQVAVWFQNRRARWKTKQIERDFAALRSRHDAL 112          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: HOX21_ORYSJ (Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. japonica GN=HOX21 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.198e-16
Identity = 41/66 (62.12%), Postives = 50/66 (75.76%), Query Frame = 1
Query:  130 EQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSL 327
            EQ+R LE  FE    KLEP +KMQ+A  LGLQPRQVAIWFQN+RARWK+KQ+E DY  L+   D++
Sbjct:  137 EQVRTLEKNFEL-GNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDALKRQLDAV 201          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: HOX21_ORYSI (Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. indica GN=HOX21 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 5.198e-16
Identity = 41/66 (62.12%), Postives = 50/66 (75.76%), Query Frame = 1
Query:  130 EQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSL 327
            EQ+R LE  FE    KLEP +KMQ+A  LGLQPRQVAIWFQN+RARWK+KQ+E DY  L+   D++
Sbjct:  131 EQVRTLEKNFEL-GNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDALKRQLDAV 195          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: HOX23_ORYSJ (Homeobox-leucine zipper protein HOX23 OS=Oryza sativa subsp. japonica GN=HOX23 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.788e-16
Identity = 42/67 (62.69%), Postives = 50/67 (74.63%), Query Frame = 1
Query:  124 SDEQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDS 324
            S EQ+R LE  FES   KLEP +K Q+A  LGLQPRQVAIWFQN+RARWK+KQ+E D+  LR   D+
Sbjct:  109 SVEQVRTLERSFES-GNKLEPERKAQLARALGLQPRQVAIWFQNRRARWKTKQLEKDFDALRRQLDA 174          
The following BLAST results are available for this feature:
BLAST of CB610757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
HOX16_ORYSJ2.110e-1760.61Homeobox-leucine zipper protein HOX16 OS=Oryza sat... [more]
HOX16_ORYSI2.110e-1760.61Homeobox-leucine zipper protein HOX16 OS=Oryza sat... [more]
HOX13_ORYSJ4.701e-1759.09Homeobox-leucine zipper protein HOX13 OS=Oryza sat... [more]
HAT7_ARATH4.701e-1761.76Homeobox-leucine zipper protein HAT7 OS=Arabidopsi... [more]
ATB13_ARATH2.333e-1660.61Homeobox-leucine zipper protein ATHB-13 OS=Arabido... [more]
HOX8_ORYSJ5.198e-1657.58Homeobox-leucine zipper protein HOX8 OS=Oryza sati... [more]
HOX8_ORYSI5.198e-1657.58Homeobox-leucine zipper protein HOX8 OS=Oryza sati... [more]
HOX21_ORYSJ5.198e-1662.12Homeobox-leucine zipper protein HOX21 OS=Oryza sat... [more]
HOX21_ORYSI5.198e-1662.12Homeobox-leucine zipper protein HOX21 OS=Oryza sat... [more]
HOX23_ORYSJ6.788e-1662.69Homeobox-leucine zipper protein HOX23 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0002_IaF_D04 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IaF_D04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610757 ID=CB610757; Name=CB610757; organism=Citrus sinensis; type=EST; length=707bp
GCGGGGGAGCTCCGATCACAATTTCATAAAATCAAAATGATTGAGAGAAG
AAAAGATGACTCTGCTGCTTCACCAGAAGCAAAAAGGAAGAAGAAGAGCA
AAATGAAGAACAAGAGAAGGTTTAGTGATGAACAAATAAGGTTGCTGGAG
TCCATATTCGAATCAGAGTCCACGAAGCTTGAACCAAGGAAGAAGATGCA
AGTAGCAACGGAGCTAGGGTTGCAGCCTCGCCAGGTAGCTATATGGTTTC
AGAACAAAAGAGCTAGATGGAAATCAAAACAGATTGAGCATGATTATGCT
CAACTCAGAGCCAACTATGATAGTTTGGCATCTGGTTTTGAATCCTTGAT
CAAAGAGAAGGAGTCCCTGCTCTTAGAGTTGCAAATGCTGAATGAACAGC
TGGGAAAATCGGACGATGAAATTAATGGCGTCGGCAAGGACTTGAAAAGA
AGTGATTGGAGCAGTTCAAACAGAGGAAATAATAATGATAATAATGACAA
CAACAGAATCATAGATGATTTTATAGCATCATCTGAAAAATGGTTCAATG
AGGACTCAGGTGGCCTCTTAGACCCGTCCACAAGCAGCAGTTCACAGTCA
CACTGGTTAAACTTCTGGGTTTAAATTGATCGATCACAGTACCTTGGAGA
AGCTAATATACAAATTTATTTCTATCTATTTTGTATTCTATTGCAATATA
TCATGAG
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