CB610757

Overview
NameCB610757
Unique NameCB610757
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: HOX23_ORYSI (Homeobox-leucine zipper protein HOX23 OS=Oryza sativa subsp. indica GN=HOX23 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.788e-16
Identity = 42/67 (62.69%), Postives = 50/67 (74.63%), Query Frame = 1
Query:  124 SDEQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDS 324
            S EQ+R LE  FES   KLEP +K Q+A  LGLQPRQVAIWFQN+RARWK+KQ+E D+  LR   D+
Sbjct:  109 SVEQVRTLERSFES-GNKLEPERKAQLARALGLQPRQVAIWFQNRRARWKTKQLEKDFDALRRQLDA 174          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: HOX13_ORYSI (Homeobox-leucine zipper protein HOX13 OS=Oryza sativa subsp. indica GN=HOX13 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 6.788e-16
Identity = 37/64 (57.81%), Postives = 54/64 (84.38%), Query Frame = 1
Query:  130 EQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYD 321
            EQ+R LE  F++++ KL+P +K ++A +LGLQPRQVA+WFQN+RARWK+KQ+E D+A LRA ++
Sbjct:   79 EQVRALERSFDTDN-KLDPDRKARIARDLGLQPRQVAVWFQNRRARWKTKQLERDFAALRAQHN 141          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: ATB20_ARATH (Homeobox-leucine zipper protein ATHB-20 OS=Arabidopsis thaliana GN=ATHB-20 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 6.788e-16
Identity = 38/68 (55.88%), Postives = 52/68 (76.47%), Query Frame = 1
Query:  130 EQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSLAS 333
            EQ++ LE  FE    KLEP +K+Q+A  LG+QPRQ+AIWFQN+RARWK++Q+E DY  L+  ++SL S
Sbjct:   94 EQVKALEKSFEL-GNKLEPERKIQLAKALGMQPRQIAIWFQNRRARWKTRQLERDYDSLKKQFESLKS 160          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: ATB21_ARATH (Homeobox-leucine zipper protein ATHB-21 OS=Arabidopsis thaliana GN=ATHB-21 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15
Identity = 37/67 (55.22%), Postives = 54/67 (80.60%), Query Frame = 1
Query:  124 SDEQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDS 324
            SDEQ+R+LE  FE +  KLE  +K ++A+ELGL PRQVA+WFQN+RARWK+K++E +Y +L+  Y++
Sbjct:   66 SDEQVRMLEISFEDDH-KLESERKDRLASELGLDPRQVAVWFQNRRARWKNKRVEDEYTKLKNAYET 131          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: ATB53_ARATH (Homeobox-leucine zipper protein ATHB-53 OS=Arabidopsis thaliana GN=ATHB-53 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.400e-15
Identity = 37/71 (52.11%), Postives = 56/71 (78.87%), Query Frame = 1
Query:  124 SDEQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSLASG 336
            +DEQ+ +LE  F +E  KLE  +K ++A ELGL PRQVA+WFQN+RARWK+K++E +YA+L+ ++D++  G
Sbjct:   76 TDEQVNMLEYSFGNEH-KLESGRKEKIAGELGLDPRQVAVWFQNRRARWKNKKLEEEYAKLKNHHDNVVLG 145          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: ATB22_ARATH (Homeobox-leucine zipper protein ATHB-22 OS=Arabidopsis thaliana GN=ATHB-22 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.280e-14
Identity = 36/73 (49.32%), Postives = 51/73 (69.86%), Query Frame = 1
Query:  124 SDEQIRLLESIFESE-------STKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYD 321
            + EQ++ LE  F+ E         KL P +KM+++ ELGLQPRQ+A+WFQN++ARWK+KQ+EH Y  LR  +D
Sbjct:   76 TSEQLKFLERSFQEEIKLNPDRKMKLNPDRKMKLSKELGLQPRQIAVWFQNRKARWKNKQLEHLYESLRQEFD 148          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: ATB54_ARATH (Homeobox-leucine zipper protein ATHB-54 OS=Arabidopsis thaliana GN=ATHB-54 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.672e-14
Identity = 38/65 (58.46%), Postives = 51/65 (78.46%), Query Frame = 1
Query:  133 QIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSL 327
            Q+RLLE  FE E  +LEP +K+ +A +LGLQP QVA+WFQN+RAR+K+KQ+EHD   L+A+Y  L
Sbjct:   76 QLRLLEESFEEEK-RLEPDRKLWLAEKLGLQPSQVAVWFQNRRARYKTKQLEHDCDSLKASYAKL 139          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: ATB40_ARATH (Homeobox-leucine zipper protein ATHB-40 OS=Arabidopsis thaliana GN=ATHB-40 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14
Identity = 35/68 (51.47%), Postives = 53/68 (77.94%), Query Frame = 1
Query:  124 SDEQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSL 327
            +DEQ+ +LE  F  E  KLE  +K ++A ELGL PRQVA+WFQN+RARWK+K++E +Y +L+ ++D++
Sbjct:   61 TDEQVNMLEMSFGDEH-KLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEEYNKLKNSHDNV 127          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: HOX12_ORYSJ (Homeobox-leucine zipper protein HOX12 OS=Oryza sativa subsp. japonica GN=HOX12 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.379e-13
Identity = 37/68 (54.41%), Postives = 52/68 (76.47%), Query Frame = 1
Query:  124 SDEQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSL 327
            SDEQ R LE  F+ E  KLE  +K+Q+A ELGL  +QVA+WFQN+RAR KSK +E ++A+LR+ +D++
Sbjct:   66 SDEQARFLEMSFKKER-KLETPRKVQLAAELGLDAKQVAVWFQNRRARHKSKLMEEEFAKLRSAHDAV 132          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: HOX12_ORYSI (Homeobox-leucine zipper protein HOX12 OS=Oryza sativa subsp. indica GN=HOX12 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.379e-13
Identity = 37/68 (54.41%), Postives = 52/68 (76.47%), Query Frame = 1
Query:  124 SDEQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSL 327
            SDEQ R LE  F+ E  KLE  +K+Q+A ELGL  +QVA+WFQN+RAR KSK +E ++A+LR+ +D++
Sbjct:   66 SDEQARFLEMSFKKER-KLETPRKVQLAAELGLDAKQVAVWFQNRRARHKSKLMEEEFAKLRSAHDAV 132          
The following BLAST results are available for this feature:
BLAST of CB610757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
HOX23_ORYSI6.788e-1662.69Homeobox-leucine zipper protein HOX23 OS=Oryza sat... [more]
HOX13_ORYSI6.788e-1657.81Homeobox-leucine zipper protein HOX13 OS=Oryza sat... [more]
ATB20_ARATH6.788e-1655.88Homeobox-leucine zipper protein ATHB-20 OS=Arabido... [more]
ATB21_ARATH2.580e-1555.22Homeobox-leucine zipper protein ATHB-21 OS=Arabido... [more]
ATB53_ARATH4.400e-1552.11Homeobox-leucine zipper protein ATHB-53 OS=Arabido... [more]
ATB22_ARATH1.280e-1449.32Homeobox-leucine zipper protein ATHB-22 OS=Arabido... [more]
ATB54_ARATH1.672e-1458.46Homeobox-leucine zipper protein ATHB-54 OS=Arabido... [more]
ATB40_ARATH4.865e-1451.47Homeobox-leucine zipper protein ATHB-40 OS=Arabido... [more]
HOX12_ORYSJ5.379e-1354.41Homeobox-leucine zipper protein HOX12 OS=Oryza sat... [more]
HOX12_ORYSI5.379e-1354.41Homeobox-leucine zipper protein HOX12 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0002_IaF_D04 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IaF_D04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610757 ID=CB610757; Name=CB610757; organism=Citrus sinensis; type=EST; length=707bp
GCGGGGGAGCTCCGATCACAATTTCATAAAATCAAAATGATTGAGAGAAG
AAAAGATGACTCTGCTGCTTCACCAGAAGCAAAAAGGAAGAAGAAGAGCA
AAATGAAGAACAAGAGAAGGTTTAGTGATGAACAAATAAGGTTGCTGGAG
TCCATATTCGAATCAGAGTCCACGAAGCTTGAACCAAGGAAGAAGATGCA
AGTAGCAACGGAGCTAGGGTTGCAGCCTCGCCAGGTAGCTATATGGTTTC
AGAACAAAAGAGCTAGATGGAAATCAAAACAGATTGAGCATGATTATGCT
CAACTCAGAGCCAACTATGATAGTTTGGCATCTGGTTTTGAATCCTTGAT
CAAAGAGAAGGAGTCCCTGCTCTTAGAGTTGCAAATGCTGAATGAACAGC
TGGGAAAATCGGACGATGAAATTAATGGCGTCGGCAAGGACTTGAAAAGA
AGTGATTGGAGCAGTTCAAACAGAGGAAATAATAATGATAATAATGACAA
CAACAGAATCATAGATGATTTTATAGCATCATCTGAAAAATGGTTCAATG
AGGACTCAGGTGGCCTCTTAGACCCGTCCACAAGCAGCAGTTCACAGTCA
CACTGGTTAAACTTCTGGGTTTAAATTGATCGATCACAGTACCTTGGAGA
AGCTAATATACAAATTTATTTCTATCTATTTTGTATTCTATTGCAATATA
TCATGAG
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