CB610757

Overview
NameCB610757
Unique NameCB610757
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: ATB23_ARATH (Homeobox-leucine zipper protein ATHB-23 OS=Arabidopsis thaliana GN=ATHB-23 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.175e-13
Identity = 36/66 (54.55%), Postives = 49/66 (74.24%), Query Frame = 1
Query:  130 EQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSL 327
            EQ++ LE  FE    KLE  +K+++A  LGLQPRQ+AIWFQN+RAR K+KQ+E DY  L+  ++SL
Sbjct:   78 EQLKALEKDFEL-GNKLESDRKLELARALGLQPRQIAIWFQNRRARSKTKQLEKDYDMLKRQFESL 142          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: ATB51_ARATH (Putative homeobox-leucine zipper protein ATHB-51 OS=Arabidopsis thaliana GN=ATHB-51 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12
Identity = 34/63 (53.97%), Postives = 47/63 (74.60%), Query Frame = 1
Query:  133 QIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYD 321
            Q+  LE  F+ E  KL+  +K++++ ELGLQPRQ+A+WFQN+RARWK+KQ+E  Y  LR  YD
Sbjct:   86 QLASLERSFQEE-IKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQLYDSLRQEYD 147          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: HOX14_ORYSJ (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. japonica GN=HOX14 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.669e-12
Identity = 34/67 (50.75%), Postives = 51/67 (76.12%), Query Frame = 1
Query:  124 SDEQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDS 324
            SDEQ+ +LE  F  E  KLE  +K+ +A+ELGL P+QVA+WFQN+RAR KSK +E ++++L+  +D+
Sbjct:   67 SDEQVEMLELSFREER-KLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEEFSKLKHAHDA 132          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: HOX14_ORYSI (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. indica GN=HOX14 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.669e-12
Identity = 34/67 (50.75%), Postives = 51/67 (76.12%), Query Frame = 1
Query:  124 SDEQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDS 324
            SDEQ+ +LE  F  E  KLE  +K+ +A+ELGL P+QVA+WFQN+RAR KSK +E ++++L+  +D+
Sbjct:   67 SDEQVEMLELSFREER-KLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEEFSKLKHAHDA 132          
The following BLAST results are available for this feature:
BLAST of CB610757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
ATB23_ARATH9.175e-1354.55Homeobox-leucine zipper protein ATHB-23 OS=Arabido... [more]
ATB51_ARATH1.198e-1253.97Putative homeobox-leucine zipper protein ATHB-51 O... [more]
HOX14_ORYSJ2.669e-1250.75Homeobox-leucine zipper protein HOX14 OS=Oryza sat... [more]
HOX14_ORYSI2.669e-1250.75Homeobox-leucine zipper protein HOX14 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0002_IaF_D04 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IaF_D04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610757 ID=CB610757; Name=CB610757; organism=Citrus sinensis; type=EST; length=707bp
GCGGGGGAGCTCCGATCACAATTTCATAAAATCAAAATGATTGAGAGAAG
AAAAGATGACTCTGCTGCTTCACCAGAAGCAAAAAGGAAGAAGAAGAGCA
AAATGAAGAACAAGAGAAGGTTTAGTGATGAACAAATAAGGTTGCTGGAG
TCCATATTCGAATCAGAGTCCACGAAGCTTGAACCAAGGAAGAAGATGCA
AGTAGCAACGGAGCTAGGGTTGCAGCCTCGCCAGGTAGCTATATGGTTTC
AGAACAAAAGAGCTAGATGGAAATCAAAACAGATTGAGCATGATTATGCT
CAACTCAGAGCCAACTATGATAGTTTGGCATCTGGTTTTGAATCCTTGAT
CAAAGAGAAGGAGTCCCTGCTCTTAGAGTTGCAAATGCTGAATGAACAGC
TGGGAAAATCGGACGATGAAATTAATGGCGTCGGCAAGGACTTGAAAAGA
AGTGATTGGAGCAGTTCAAACAGAGGAAATAATAATGATAATAATGACAA
CAACAGAATCATAGATGATTTTATAGCATCATCTGAAAAATGGTTCAATG
AGGACTCAGGTGGCCTCTTAGACCCGTCCACAAGCAGCAGTTCACAGTCA
CACTGGTTAAACTTCTGGGTTTAAATTGATCGATCACAGTACCTTGGAGA
AGCTAATATACAAATTTATTTCTATCTATTTTGTATTCTATTGCAATATA
TCATGAG
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