CB610771

Overview
NameCB610771
Unique NameCB610771
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length812
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610771 vs. ExPASy Swiss-Prot
Match: APT_ECO8A (Adenine phosphoribosyltransferase OS=Escherichia coli O8 (strain IAI1) GN=apt PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.505e-39
Identity = 77/141 (54.61%), Postives = 105/141 (74.47%), Query Frame = 2
Query:   47 LFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 469
            LF+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   27 LFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167          
BLAST of CB610771 vs. ExPASy Swiss-Prot
Match: APT_ECO81 (Adenine phosphoribosyltransferase OS=Escherichia coli O81 (strain ED1a) GN=apt PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.505e-39
Identity = 77/141 (54.61%), Postives = 105/141 (74.47%), Query Frame = 2
Query:   47 LFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 469
            LF+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   27 LFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167          
BLAST of CB610771 vs. ExPASy Swiss-Prot
Match: APT_ECO7I (Adenine phosphoribosyltransferase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=apt PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.505e-39
Identity = 77/141 (54.61%), Postives = 105/141 (74.47%), Query Frame = 2
Query:   47 LFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 469
            LF+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   27 LFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167          
BLAST of CB610771 vs. ExPASy Swiss-Prot
Match: APT_ECO5E (Adenine phosphoribosyltransferase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=apt PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.505e-39
Identity = 77/141 (54.61%), Postives = 105/141 (74.47%), Query Frame = 2
Query:   47 LFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 469
            LF+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   27 LFRDVTSLLEDPKAYALSIDLLVERYKNAGINKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167          
BLAST of CB610771 vs. ExPASy Swiss-Prot
Match: APT_ECO57 (Adenine phosphoribosyltransferase OS=Escherichia coli O157:H7 GN=apt PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.505e-39
Identity = 77/141 (54.61%), Postives = 105/141 (74.47%), Query Frame = 2
Query:   47 LFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 469
            LF+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   27 LFRDVTSLLEDPKAYALSIDLLVERYKNAGINKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167          
BLAST of CB610771 vs. ExPASy Swiss-Prot
Match: APT_ECO55 (Adenine phosphoribosyltransferase OS=Escherichia coli (strain 55989 / EAEC) GN=apt PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.505e-39
Identity = 77/141 (54.61%), Postives = 105/141 (74.47%), Query Frame = 2
Query:   47 LFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 469
            LF+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   27 LFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167          
BLAST of CB610771 vs. ExPASy Swiss-Prot
Match: APT_ECO45 (Adenine phosphoribosyltransferase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=apt PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.505e-39
Identity = 77/141 (54.61%), Postives = 105/141 (74.47%), Query Frame = 2
Query:   47 LFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 469
            LF+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   27 LFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167          
BLAST of CB610771 vs. ExPASy Swiss-Prot
Match: APT_ECO27 (Adenine phosphoribosyltransferase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=apt PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.505e-39
Identity = 77/141 (54.61%), Postives = 105/141 (74.47%), Query Frame = 2
Query:   47 LFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 469
            LF+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   27 LFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167          
BLAST of CB610771 vs. ExPASy Swiss-Prot
Match: APT_ECO24 (Adenine phosphoribosyltransferase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=apt PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.505e-39
Identity = 77/141 (54.61%), Postives = 105/141 (74.47%), Query Frame = 2
Query:   47 LFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 469
            LF+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   27 LFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167          
BLAST of CB610771 vs. ExPASy Swiss-Prot
Match: APT_CLOBB (Adenine phosphoribosyltransferase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=apt PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.505e-39
Identity = 77/142 (54.23%), Postives = 105/142 (73.94%), Query Frame = 2
Query:   50 FQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGE 475
            F+DITTL+ D +  + +ID+FVE  KDKN+ ++ G EARGFIFG P+A A+GA FVP+RKP KLPGE IS  Y LEYG D +++H  +++ G+R  IVDDL+ATGGT+    +L+E  G  VV  A +IEL +LKGR++LG+
Sbjct:   20 FKDITTLIGDGEGLKASIDMFVEYLKDKNVDLIVGPEARGFIFGVPVAYALGAGFVPVRKPGKLPGETISVNYDLEYGSDSLQIHKDSIKKGQRVAIVDDLLATGGTVEGVAKLVEEAGGEVVSLAFLIELIDLKGRDKLGD 161          
The following BLAST results are available for this feature:
BLAST of CB610771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_ECO8A5.505e-3954.61Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECO815.505e-3954.61Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECO7I5.505e-3954.61Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECO5E5.505e-3954.61Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECO575.505e-3954.61Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECO555.505e-3954.61Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECO455.505e-3954.61Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECO275.505e-3954.61Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECO245.505e-3954.61Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_CLOBB5.505e-3954.23Adenine phosphoribosyltransferase OS=Clostridium b... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0002_IVaF_H08 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IVaF_H08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610771 ID=CB610771; Name=CB610771; organism=Citrus sinensis; type=EST; length=812bp
GGGGGAGGATGGTTGCTTTGGAGTGCATATTAATTTGTTCTGGAGATTGT
TTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGAGATACT
ATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGTTGTTGC
AGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTGGCTA
TTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGGGGAG
GTCATTTCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAATGGAGAT
GCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGACGATC
TAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTGAGCGA
GTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCAGAGCT
AAAGGGTCGGGAACGGCTGGGAGAGAAACCACTATTTGTTCTTGTAAGCT
AAACTTGATCTCAGTTTATGGTTTAAATGCAATGTTTGTGGACCATATGG
GTTTCTAGTCGCTCGGGCTCTGCTCAAAGCTTGAGAACTTCATAAAACCA
TCTGATTGATATAAGAGCAGTTTCATTGGCTTTTTATTTTATTTAAGAGG
TTGGGGAAAGAGTGGTGGGGAAGCTGGGTTCTGTCTGCTATTGTTGGGTT
TAAGAATGATAGGCTTATGAAAAAATTCCATCTTCCCGTAAACAGCTGTA
TTTGATGCTTTTCAAATTATCTGGAGATTCTATCTGATGGTTGTTGATGT
ATAAAAAAAAAA
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