CB610771

Overview
NameCB610771
Unique NameCB610771
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length812
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610771 vs. ExPASy Swiss-Prot
Match: APT_GLUOX (Adenine phosphoribosyltransferase OS=Gluconobacter oxydans GN=apt PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.347e-28
Identity = 66/151 (43.71%), Postives = 99/151 (65.56%), Query Frame = 2
Query:   47 LFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 499
            LF DI+TL+    A++                ++AGIE+RGF+   P+AL +G  F  +RKP KLPG+ IS +Y LEYG+D + +   A++ G+R +++DDL+ATGGTL+A+I LL +VG  VV  + +IEL +LKGRE+L + PL  L++
Sbjct:   27 LFYDISTLIRSPDAWQVATARLARVIAAWQPDILAGIESRGFLTAAPLALRLGCGFTMLRKPGKLPGKTISLKYGLEYGEDELHIQADAIKPGQRVVVLDDLLATGGTLAASIDLLRKVGAEVVGASVLIELADLKGREKL-DVPLNALMT 176          
BLAST of CB610771 vs. ExPASy Swiss-Prot
Match: APT_STRCO (Adenine phosphoribosyltransferase OS=Streptomyces coelicolor GN=apt PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.372e-28
Identity = 65/141 (46.10%), Postives = 86/141 (60.99%), Query Frame = 2
Query:   47 LFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 469
            +F+DIT LL D  AF    D   E       + V G+EARGFI G P+AL  G  F+P+RK  KLPG  +S+ Y LEYG   +E+H   + AG+R L+VDD++ATGGT  A++ L+ R G  V   A ++EL  L GR RL
Sbjct:   27 VFKDITPLLADPGAFAALTDALAEAAGRTGATKVVGLEARGFILGAPVALRAGLGFIPVRKAGKLPGATLSQAYDLEYGSAEIEVHAEDLTAGDRVLVVDDVLATGGTAEASLELIRRAGAEVAGLAVLMELGFLGGRARL 167          
BLAST of CB610771 vs. ExPASy Swiss-Prot
Match: APT_PSESM (Adenine phosphoribosyltransferase OS=Pseudomonas syringae pv. tomato GN=apt PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.372e-28
Identity = 63/143 (44.06%), Postives = 89/143 (62.24%), Query Frame = 2
Query:   47 LFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGE 475
            +F+DIT L    KA R  ID FV+RY D + S +  ++ARGF+ G  +A  +    V  RK  KLP +V+SE Y  EYG+  +E+H  ++  G   ++ DDL+ATGGTL AA  L+ R+G  V E A +I+LPEL G +RL +
Sbjct:   24 VFRDITPLFQSPKATRQVIDSFVQRYIDADFSHIGVMDARGFLIGSVVAYQLNKPLVLFRKQGKLPADVLSEAYQTEYGEAYLEVHADSLCEGNSVIMFDDLIATGGTLIAAANLIRRMGAQVHEAAAIIDLPELGGSKRLND 166          
BLAST of CB610771 vs. ExPASy Swiss-Prot
Match: APT_MARMS (Adenine phosphoribosyltransferase OS=Marinomonas sp. (strain MWYL1) GN=apt PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.372e-28
Identity = 65/150 (43.33%), Postives = 97/150 (64.67%), Query Frame = 2
Query:   50 FQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK--PLFVL 493
            F+DIT +  D K  R  +D +V RY   +I+ +A I+ARGF+    +A  +    + +RK  KLPG+ IS++Y+LEYG+  +E+  GAV+AG+  L+ DDL+ATGGTL AAI LL   G  + E A +I+LP+L G ++L +   P+F L
Sbjct:   25 FRDITPIFSDPKGMRMVVDAYVHRYIATDITHIACIDARGFLIAAVLAYELQKPLILVRKKGKLPGKTISQKYALEYGEAELEIQEGAVKAGDEVLLFDDLIATGGTLLAAIELLTSQGASIKEVAAIIDLPDLGGSQKLRDSDIPVFSL 174          
BLAST of CB610771 vs. ExPASy Swiss-Prot
Match: APT_FRASN (Adenine phosphoribosyltransferase OS=Frankia sp. (strain EAN1pec) GN=apt PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.372e-28
Identity = 68/142 (47.89%), Postives = 88/142 (61.97%), Query Frame = 2
Query:   47 LFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG 472
            +F+DIT LL    AF   +    +  +    + +AGIEARGF+   P+A  +GA  VP+RK  KLPG   SE Y+LEYG  V+E+H  AV  GER LIVDD++ATGGT +AA  LL   G  VV  A ++EL  L GR+R G
Sbjct:   33 VFKDITPLLSTPAAFGVVVGALADLARGLGATTIAGIEARGFLLAAPVADRVGAGIVPIRKQGKLPGRTRSEAYALEYGTAVLEIHEDAVPTGERVLIVDDVLATGGTAAAAHTLLRGCGADVVGLAVLMELTFLSGRDRTG 174          
BLAST of CB610771 vs. ExPASy Swiss-Prot
Match: APT_KOSOT (Adenine phosphoribosyltransferase OS=Kosmotoga olearia (strain TBF 19.5.1) GN=apt PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.710e-28
Identity = 62/141 (43.97%), Postives = 92/141 (65.25%), Query Frame = 2
Query:   47 LFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 469
            +F+D+T +L D  AF+  I    E  KD   +++   EARGFIF  P+AL +   FVP+RKP KLP + +S EYSLEYG   +EMH  A++ G++ LIVDD++ATGGT+ A   ++E+VG  +     ++EL  L+ R++L
Sbjct:   19 IFKDVTPMLKDPGAFKVCISSLKELVKDFEFNLIVAPEARGFIFAAPLALELEKGFVPIRKPGKLPYKTVSVEYSLEYGTATLEMHTDAIKEGDKVLIVDDVLATGGTMKAIAEMVEKVGGTISGIVSLVELSFLEPRKKL 159          
BLAST of CB610771 vs. ExPASy Swiss-Prot
Match: APT_HELPY (Adenine phosphoribosyltransferase OS=Helicobacter pylori GN=apt PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.710e-28
Identity = 67/146 (45.89%), Postives = 91/146 (62.33%), Query Frame = 2
Query:   47 LFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQA--GERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 478
            LF+DITTLL   K F   ID   +RY   NI  + GIEARGFI G  +A A+G  FVP+RK  KLP   +S+ YSLEYG D +E+H  A +   G R +++DDL+ATGGT  A++ L++ +    +E   +I L EL G + L E+
Sbjct:   25 LFKDITTLLNYPKLFNKLIDTLKKRYLALNIDFIVGIEARGFILGSALAYALGVGFVPVRKKGKLPAHTLSQSYSLEYGSDSIEIHSDAFRGIKGVRVVLIDDLLATGGTALASLELIKALQAECIEACFLIGLKELPGIQLLEER 170          
BLAST of CB610771 vs. ExPASy Swiss-Prot
Match: APT_HELPS (Adenine phosphoribosyltransferase OS=Helicobacter pylori (strain Shi470) GN=apt PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.710e-28
Identity = 67/146 (45.89%), Postives = 91/146 (62.33%), Query Frame = 2
Query:   47 LFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQA--GERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 478
            LF+DITTLL   K F   ID   +RY   NI  + GIEARGFI G  +A A+G  FVP+RK  KLP   +S+ YSLEYG D +E+H  A +   G R +++DDL+ATGGT  A++ L++ +    +E   +I L EL G + L E+
Sbjct:   25 LFKDITTLLNYPKLFNKLIDALKKRYLALNIDFIVGIEARGFILGSALAYALGVGFVPVRKKGKLPAHTLSQSYSLEYGSDSIEIHSDAFRGVKGVRVVLIDDLLATGGTALASLELIKALQAECIEACFLIGLKELPGIQLLEER 170          
BLAST of CB610771 vs. ExPASy Swiss-Prot
Match: APT_HELPH (Adenine phosphoribosyltransferase OS=Helicobacter pylori (strain HPAG1) GN=apt PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.710e-28
Identity = 67/146 (45.89%), Postives = 91/146 (62.33%), Query Frame = 2
Query:   47 LFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQA--GERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 478
            LF+DITTLL   K F   ID   +RY   NI  + GIEARGFI G  +A A+G  FVP+RK  KLP   +S+ YSLEYG D +E+H  A +   G R +++DDL+ATGGT  A++ L++ +    +E   +I L EL G + L E+
Sbjct:   25 LFKDITTLLNYPKLFNKLIDALKKRYLALNIDFIVGIEARGFILGSALAYALGVGFVPVRKKGKLPAHTLSQSYSLEYGSDSIEIHSDAFRGVKGVRVVLIDDLLATGGTALASLELIKALQAECIEACFLIGLKELPGIQLLEER 170          
BLAST of CB610771 vs. ExPASy Swiss-Prot
Match: APT_HELP2 (Adenine phosphoribosyltransferase OS=Helicobacter pylori (strain P12) GN=apt PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.710e-28
Identity = 67/146 (45.89%), Postives = 91/146 (62.33%), Query Frame = 2
Query:   47 LFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQA--GERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 478
            LF+DITTLL   K F   ID   +RY   NI  + GIEARGFI G  +A A+G  FVP+RK  KLP   +S+ YSLEYG D +E+H  A +   G R +++DDL+ATGGT  A++ L++ +    +E   +I L EL G + L E+
Sbjct:   25 LFKDITTLLNYPKLFNKLIDALKKRYLALNIDFIVGIEARGFILGSALAYALGVGFVPVRKKGKLPAHTLSQSYSLEYGSDSIEIHSDAFRGVKGVRVVLIDDLLATGGTALASLELIKALQAECIEACFLIGLKELPGIQLLEER 170          
The following BLAST results are available for this feature:
BLAST of CB610771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_GLUOX3.347e-2843.71Adenine phosphoribosyltransferase OS=Gluconobacter... [more]
APT_STRCO4.372e-2846.10Adenine phosphoribosyltransferase OS=Streptomyces ... [more]
APT_PSESM4.372e-2844.06Adenine phosphoribosyltransferase OS=Pseudomonas s... [more]
APT_MARMS4.372e-2843.33Adenine phosphoribosyltransferase OS=Marinomonas s... [more]
APT_FRASN4.372e-2847.89Adenine phosphoribosyltransferase OS=Frankia sp. (... [more]
APT_KOSOT5.710e-2843.97Adenine phosphoribosyltransferase OS=Kosmotoga ole... [more]
APT_HELPY5.710e-2845.89Adenine phosphoribosyltransferase OS=Helicobacter ... [more]
APT_HELPS5.710e-2845.89Adenine phosphoribosyltransferase OS=Helicobacter ... [more]
APT_HELPH5.710e-2845.89Adenine phosphoribosyltransferase OS=Helicobacter ... [more]
APT_HELP25.710e-2845.89Adenine phosphoribosyltransferase OS=Helicobacter ... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0002_IVaF_H08 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IVaF_H08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610771 ID=CB610771; Name=CB610771; organism=Citrus sinensis; type=EST; length=812bp
GGGGGAGGATGGTTGCTTTGGAGTGCATATTAATTTGTTCTGGAGATTGT
TTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGAGATACT
ATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGTTGTTGC
AGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTGGCTA
TTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGGGGAG
GTCATTTCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAATGGAGAT
GCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGACGATC
TAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTGAGCGA
GTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCAGAGCT
AAAGGGTCGGGAACGGCTGGGAGAGAAACCACTATTTGTTCTTGTAAGCT
AAACTTGATCTCAGTTTATGGTTTAAATGCAATGTTTGTGGACCATATGG
GTTTCTAGTCGCTCGGGCTCTGCTCAAAGCTTGAGAACTTCATAAAACCA
TCTGATTGATATAAGAGCAGTTTCATTGGCTTTTTATTTTATTTAAGAGG
TTGGGGAAAGAGTGGTGGGGAAGCTGGGTTCTGTCTGCTATTGTTGGGTT
TAAGAATGATAGGCTTATGAAAAAATTCCATCTTCCCGTAAACAGCTGTA
TTTGATGCTTTTCAAATTATCTGGAGATTCTATCTGATGGTTGTTGATGT
ATAAAAAAAAAA
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