CB610771

Overview
NameCB610771
Unique NameCB610771
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length812
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610771 vs. ExPASy Swiss-Prot
Match: APT_SHESH (Adenine phosphoribosyltransferase OS=Shewanella sediminis (strain HAW-EB3) GN=apt PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.568e-38
Identity = 74/141 (52.48%), Postives = 103/141 (73.05%), Query Frame = 2
Query:   47 LFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 469
            LF+D+T+LL D  A++ T+D+ VE+YKD+  + V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG DV+E+HV A+   ++ L++DDL+ATGGT+ A ++L+  +G  V   A VI LP+L G +RL
Sbjct:   28 LFRDVTSLLEDHTAYKATMDILVEKYKDQGFTKVVGTEARGFLFGAPLALELGLGFVPVRKPGKLPRETISESYELEYGHDVLEIHVDAINENDKVLVIDDLLATGGTIEATVKLIRNLGGKVNHAAFVISLPDLGGEKRL 168          
BLAST of CB610771 vs. ExPASy Swiss-Prot
Match: APT_SHEWM (Adenine phosphoribosyltransferase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=apt PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.660e-38
Identity = 74/146 (50.68%), Postives = 103/146 (70.55%), Query Frame = 2
Query:   47 LFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPL 484
            LF+D+T+LL D  A++ T+D+ V+ YKD   + + G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG DV+E+H  A+   ++ L+VDDL+ATGGT+ A ++L+ ++G  V   A VI LP+L G +RL E  L
Sbjct:   25 LFRDVTSLLEDHTAYKATMDILVQHYKDHGFTKIVGTEARGFLFGAPLALELGVGFVPVRKPGKLPRETISESYELEYGHDVLELHTDAINENDKVLVVDDLLATGGTIEATVKLIRKLGGEVKHAAFVISLPDLGGAKRLEEMDL 170          
BLAST of CB610771 vs. ExPASy Swiss-Prot
Match: APT_SALAR (Adenine phosphoribosyltransferase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=apt PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.660e-38
Identity = 75/141 (53.19%), Postives = 104/141 (73.76%), Query Frame = 2
Query:   47 LFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 469
            LF+D+T+LL D KA+  +I+L VERYK   I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G+  L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   27 LFRDVTSLLEDPKAYTLSIELLVERYKKAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYELEYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRL 167          
BLAST of CB610771 vs. ExPASy Swiss-Prot
Match: APT_PSEHT (Adenine phosphoribosyltransferase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=apt PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.660e-38
Identity = 69/149 (46.31%), Postives = 109/149 (73.15%), Query Frame = 2
Query:   47 LFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL 493
            +F+D+TTL+ +  AF+ TID F+  YKD+  + + G E+RGFIFG P++ A+G  F+P+RKP KLP EV+ ++Y LEYG+D +E+HV A+  G++ L+VDDL+ATGGT+ A I+L++++G    + A V+ LPEL G +R+ +  + +L
Sbjct:   25 MFRDVTTLMANPDAFKATIDAFIAAYKDQGFTKIIGTESRGFIFGAPLSYALGIPFIPVRKPGKLPREVVRQDYLLEYGEDTLELHVDAIVPGDKVLLVDDLLATGGTIEATIKLVQKLGGEATDAAFVVSLPELGGEKRIAKMGIKIL 173          
BLAST of CB610771 vs. ExPASy Swiss-Prot
Match: APT_HAES2 (Adenine phosphoribosyltransferase OS=Haemophilus somnus (strain 2336) GN=apt PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.660e-38
Identity = 76/143 (53.15%), Postives = 104/143 (72.73%), Query Frame = 2
Query:   47 LFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGE 475
            +F+DIT+L    +AF+ TIDL +ERYK K I+ V G E+RGFIFG P+ALA+   F+ +RKP KLP E I++ Y LEYG+D +EMHV ++QAG+  L++DDL+ATGGT+ A ++L+ER+   V   A VI LP+L G  RL E
Sbjct:   23 IFRDITSLTEVPEAFQATIDLIIERYKSKGITKVIGTESRGFIFGAPVALALNVPFILVRKPGKLPRETIAQSYQLEYGQDTLEMHVSSIQAGDNVLVIDDLLATGGTIEATVKLVERLQGQVKHAAFVISLPDLGGEVRLRE 165          
BLAST of CB610771 vs. ExPASy Swiss-Prot
Match: APT_HAES1 (Adenine phosphoribosyltransferase OS=Haemophilus somnus (strain 129Pt) GN=apt PE=3 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 4.660e-38
Identity = 76/143 (53.15%), Postives = 104/143 (72.73%), Query Frame = 2
Query:   47 LFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGE 475
            +F+DIT+L    +AF+ TIDL +ERYK K I+ V G E+RGFIFG P+ALA+   F+ +RKP KLP E I++ Y LEYG+D +EMHV ++QAG+  L++DDL+ATGGT+ A ++L+ER+   V   A VI LP+L G  RL E
Sbjct:   23 IFRDITSLTEVPEAFQATIDLIIERYKSKGITKVIGTESRGFIFGAPVALALNVPFILVRKPGKLPRETIAQSYQLEYGQDTLEMHVSSIQAGDNVLVIDDLLATGGTIEATVKLVERLQGQVKHAAFVISLPDLGGEVRLRE 165          
BLAST of CB610771 vs. ExPASy Swiss-Prot
Match: APT_DESOH (Adenine phosphoribosyltransferase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=apt PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 6.086e-38
Identity = 75/150 (50.00%), Postives = 107/150 (71.33%), Query Frame = 2
Query:   47 LFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 496
            +F+DITTLL D  AF++ I+ F +RY+   I  + GI+ARG IFG P+A  +   FVP+RK  K+P   I   YSLEYG+ ++E+H  A+  GER ++VDDL+ATGGT+ A I L+E++G  VVECA VI+LP+LKGRE++ +  +F L+
Sbjct:   19 MFRDITTLLQDPAAFKEAINRFYDRYRTMKIDKIVGIDARGLIFGAPLAYKLEVGFVPVRKKGKIPFRTIGAAYSLEYGESMVEIHEDAILKGERVVVVDDLIATGGTVKATIDLVEKLGGEVVECAFVIDLPDLKGREKIRDYKMFALM 168          
BLAST of CB610771 vs. ExPASy Swiss-Prot
Match: APT_SALG2 (Adenine phosphoribosyltransferase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=apt PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.356e-37
Identity = 74/141 (52.48%), Postives = 104/141 (73.76%), Query Frame = 2
Query:   47 LFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 469
            LF+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+E Y LEY  D +E+HV A++ G+  L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   27 LFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYELEYSTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRL 167          
BLAST of CB610771 vs. ExPASy Swiss-Prot
Match: APT_AERS4 (Adenine phosphoribosyltransferase OS=Aeromonas salmonicida (strain A449) GN=apt PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.356e-37
Identity = 73/141 (51.77%), Postives = 101/141 (71.63%), Query Frame = 2
Query:   47 LFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 469
            LF+DIT+L+ + +AF+ TIDL  E Y+D+ I+ + G EARGFIFG P+A A+G  FVP+RKP KLP  VI E Y+LEYG D +++H  A+  G++ L+VDDL+ATGGT+ A ++L+ R G  V + A +I LP L G  RL
Sbjct:   25 LFRDITSLIENAEAFKATIDLLAEHYRDQGITKIVGTEARGFIFGAPVAFAMGLGFVPVRKPGKLPRAVIEESYALEYGTDTLQLHTDAIVPGDKVLVVDDLLATGGTVDATVKLIRRAGGEVADAAFIISLPSLGGDARL 165          
BLAST of CB610771 vs. ExPASy Swiss-Prot
Match: APT_YERE8 (Adenine phosphoribosyltransferase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=apt PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.771e-37
Identity = 71/144 (49.31%), Postives = 104/144 (72.22%), Query Frame = 2
Query:   47 LFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 478
            LF+D+T+LL D  A+  +I+L  ERY DK ++ V G EARGF+FG P+AL++G  FVP+RKP KLP   ISE Y LEYG D +E+H  +++ G++ L++DDL+ATGGT+ A ++L+ ++G  V + A VI LP+L G  RL ++
Sbjct:   31 LFRDVTSLLEDPLAYAASIELLTERYLDKGVTKVVGTEARGFLFGAPVALSLGVGFVPVRKPGKLPRATISESYELEYGTDKLEIHTDSIKPGDKVLVIDDLLATGGTIEATVKLIRKLGGEVTDAAFVINLPDLGGEARLNDQ 174          
The following BLAST results are available for this feature:
BLAST of CB610771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_SHESH3.568e-3852.48Adenine phosphoribosyltransferase OS=Shewanella se... [more]
APT_SHEWM4.660e-3850.68Adenine phosphoribosyltransferase OS=Shewanella wo... [more]
APT_SALAR4.660e-3853.19Adenine phosphoribosyltransferase OS=Salmonella ar... [more]
APT_PSEHT4.660e-3846.31Adenine phosphoribosyltransferase OS=Pseudoalterom... [more]
APT_HAES24.660e-3853.15Adenine phosphoribosyltransferase OS=Haemophilus s... [more]
APT_HAES14.660e-3853.15Adenine phosphoribosyltransferase OS=Haemophilus s... [more]
APT_DESOH6.086e-3850.00Adenine phosphoribosyltransferase OS=Desulfococcus... [more]
APT_SALG21.356e-3752.48Adenine phosphoribosyltransferase OS=Salmonella ga... [more]
APT_AERS41.356e-3751.77Adenine phosphoribosyltransferase OS=Aeromonas sal... [more]
APT_YERE81.771e-3749.31Adenine phosphoribosyltransferase OS=Yersinia ente... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0002_IVaF_H08 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IVaF_H08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610771 ID=CB610771; Name=CB610771; organism=Citrus sinensis; type=EST; length=812bp
GGGGGAGGATGGTTGCTTTGGAGTGCATATTAATTTGTTCTGGAGATTGT
TTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGAGATACT
ATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGTTGTTGC
AGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTGGCTA
TTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGGGGAG
GTCATTTCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAATGGAGAT
GCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGACGATC
TAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTGAGCGA
GTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCAGAGCT
AAAGGGTCGGGAACGGCTGGGAGAGAAACCACTATTTGTTCTTGTAAGCT
AAACTTGATCTCAGTTTATGGTTTAAATGCAATGTTTGTGGACCATATGG
GTTTCTAGTCGCTCGGGCTCTGCTCAAAGCTTGAGAACTTCATAAAACCA
TCTGATTGATATAAGAGCAGTTTCATTGGCTTTTTATTTTATTTAAGAGG
TTGGGGAAAGAGTGGTGGGGAAGCTGGGTTCTGTCTGCTATTGTTGGGTT
TAAGAATGATAGGCTTATGAAAAAATTCCATCTTCCCGTAAACAGCTGTA
TTTGATGCTTTTCAAATTATCTGGAGATTCTATCTGATGGTTGTTGATGT
ATAAAAAAAAAA
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