CB610803

Overview
NameCB610803
Unique NameCB610803
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_STAAW (Chaperone protein clpB OS=Staphylococcus aureus (strain MW2) GN=clpB PE=3 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 3.385e-95
Identity = 169/239 (70.71%), Postives = 206/239 (86.19%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  +RILSR+TKNNP LIGEPGVGKTA+VEGLAQRIV+ DVP +L D  +  LD+ ALVAGAKYRGEFEERLKAVLKEV+E++G++ILFIDEIH+++GAG+T+G+MDA N+ KPMLARG+L CIGATTL EYR+Y+EKD+A ERRFQ+V V+EP V DT+SILRGLKE+YE +HGVRIQDRALV AA+LS RYIT R LPDKAIDLVD+ACA +R  + S+P E+D + R+ M L+
Sbjct:  184 EEIRNTIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPESLLDKTVFELDLSALVAGAKYRGEFEERLKAVLKEVKESDGRIILFIDEIHMLVGAGKTDGAMDAGNMLKPMLARGELHCIGATTLNEYREYIEKDSALERRFQKVAVSEPDVEDTISILRGLKERYEVYHGVRIQDRALVAAAELSDRYITDRFLPDKAIDLVDQACATIRTEMGSNPTELDQVNRRVMQLE 422          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_STAAS (Chaperone protein clpB OS=Staphylococcus aureus (strain MSSA476) GN=clpB PE=3 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 3.385e-95
Identity = 169/239 (70.71%), Postives = 206/239 (86.19%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  +RILSR+TKNNP LIGEPGVGKTA+VEGLAQRIV+ DVP +L D  +  LD+ ALVAGAKYRGEFEERLKAVLKEV+E++G++ILFIDEIH+++GAG+T+G+MDA N+ KPMLARG+L CIGATTL EYR+Y+EKD+A ERRFQ+V V+EP V DT+SILRGLKE+YE +HGVRIQDRALV AA+LS RYIT R LPDKAIDLVD+ACA +R  + S+P E+D + R+ M L+
Sbjct:  184 EEIRNTIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPESLLDKTVFELDLSALVAGAKYRGEFEERLKAVLKEVKESDGRIILFIDEIHMLVGAGKTDGAMDAGNMLKPMLARGELHCIGATTLNEYREYIEKDSALERRFQKVAVSEPDVEDTISILRGLKERYEVYHGVRIQDRALVAAAELSDRYITDRFLPDKAIDLVDQACATIRTEMGSNPTELDQVNRRVMQLE 422          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_STAAR (Chaperone protein clpB OS=Staphylococcus aureus (strain MRSA252) GN=clpB PE=3 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 3.385e-95
Identity = 169/239 (70.71%), Postives = 206/239 (86.19%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  +RILSR+TKNNP LIGEPGVGKTA+VEGLAQRIV+ DVP +L D  +  LD+ ALVAGAKYRGEFEERLKAVLKEV+E++G++ILFIDEIH+++GAG+T+G+MDA N+ KPMLARG+L CIGATTL EYR+Y+EKD+A ERRFQ+V V+EP V DT+SILRGLKE+YE +HGVRIQDRALV AA+LS RYIT R LPDKAIDLVD+ACA +R  + S+P E+D + R+ M L+
Sbjct:  184 EEIRNTIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPESLLDKTVFELDLSALVAGAKYRGEFEERLKAVLKEVKESDGRIILFIDEIHMLVGAGKTDGAMDAGNMLKPMLARGELHCIGATTLNEYREYIEKDSALERRFQKVAVSEPDVEDTISILRGLKERYEVYHGVRIQDRALVAAAELSDRYITDRFLPDKAIDLVDQACATIRTEMGSNPTELDQVNRRVMQLE 422          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_STAAN (Chaperone protein clpB OS=Staphylococcus aureus (strain N315) GN=clpB PE=1 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 3.385e-95
Identity = 169/239 (70.71%), Postives = 206/239 (86.19%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  +RILSR+TKNNP LIGEPGVGKTA+VEGLAQRIV+ DVP +L D  +  LD+ ALVAGAKYRGEFEERLKAVLKEV+E++G++ILFIDEIH+++GAG+T+G+MDA N+ KPMLARG+L CIGATTL EYR+Y+EKD+A ERRFQ+V V+EP V DT+SILRGLKE+YE +HGVRIQDRALV AA+LS RYIT R LPDKAIDLVD+ACA +R  + S+P E+D + R+ M L+
Sbjct:  184 EEIRNTIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPESLLDKTVFELDLSALVAGAKYRGEFEERLKAVLKEVKESDGRIILFIDEIHMLVGAGKTDGAMDAGNMLKPMLARGELHCIGATTLNEYREYIEKDSALERRFQKVAVSEPDVEDTISILRGLKERYEVYHGVRIQDRALVAAAELSDRYITDRFLPDKAIDLVDQACATIRTEMGSNPTELDQVNRRVMQLE 422          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_STAAM (Chaperone protein clpB OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=clpB PE=1 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 3.385e-95
Identity = 169/239 (70.71%), Postives = 206/239 (86.19%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  +RILSR+TKNNP LIGEPGVGKTA+VEGLAQRIV+ DVP +L D  +  LD+ ALVAGAKYRGEFEERLKAVLKEV+E++G++ILFIDEIH+++GAG+T+G+MDA N+ KPMLARG+L CIGATTL EYR+Y+EKD+A ERRFQ+V V+EP V DT+SILRGLKE+YE +HGVRIQDRALV AA+LS RYIT R LPDKAIDLVD+ACA +R  + S+P E+D + R+ M L+
Sbjct:  184 EEIRNTIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPESLLDKTVFELDLSALVAGAKYRGEFEERLKAVLKEVKESDGRIILFIDEIHMLVGAGKTDGAMDAGNMLKPMLARGELHCIGATTLNEYREYIEKDSALERRFQKVAVSEPDVEDTISILRGLKERYEVYHGVRIQDRALVAAAELSDRYITDRFLPDKAIDLVDQACATIRTEMGSNPTELDQVNRRVMQLE 422          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_STAAC (Chaperone protein clpB OS=Staphylococcus aureus (strain COL) GN=clpB PE=3 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 3.385e-95
Identity = 169/239 (70.71%), Postives = 206/239 (86.19%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  +RILSR+TKNNP LIGEPGVGKTA+VEGLAQRIV+ DVP +L D  +  LD+ ALVAGAKYRGEFEERLKAVLKEV+E++G++ILFIDEIH+++GAG+T+G+MDA N+ KPMLARG+L CIGATTL EYR+Y+EKD+A ERRFQ+V V+EP V DT+SILRGLKE+YE +HGVRIQDRALV AA+LS RYIT R LPDKAIDLVD+ACA +R  + S+P E+D + R+ M L+
Sbjct:  184 EEIRNTIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPESLLDKTVFELDLSALVAGAKYRGEFEERLKAVLKEVKESDGRIILFIDEIHMLVGAGKTDGAMDAGNMLKPMLARGELHCIGATTLNEYREYIEKDSALERRFQKVAVSEPDVEDTISILRGLKERYEVYHGVRIQDRALVAAAELSDRYITDRFLPDKAIDLVDQACATIRTEMGSNPTELDQVNRRVMQLE 422          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_LACPL (Chaperone protein clpB OS=Lactobacillus plantarum GN=clpB PE=3 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 3.385e-95
Identity = 171/239 (71.55%), Postives = 207/239 (86.61%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEI   +RILSR+TKNNP LIGEPGVGKTA+VEGLAQRIVRGDVP NL D  L +LDMG+L+AGAKYRGEFEERLKAVLKE+++++G++I+FIDEIH ++GAG+TEGSMDA NL KPMLARG+L  IGATTL+EYR+Y+EKD A ERRFQ+V VAEPSV DT+SILRGLKE++E HHGVRI D ALV AA+LS RYIT R+LPDKA+DLVDEA A +RV ++S+P E+D + R+ M L+
Sbjct:  187 EEILDVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVPENLKDKTLFSLDMGSLIAGAKYRGEFEERLKAVLKEIKKSDGQIIMFIDEIHNIVGAGKTEGSMDAGNLLKPMLARGELHLIGATTLDEYRQYMEKDKALERRFQKVLVAEPSVEDTISILRGLKERFEIHHGVRIHDNALVAAAKLSDRYITDRYLPDKALDLVDEASAEIRVEMNSNPTELDQVNRQLMRLE 425          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_LISMO (Chaperone protein clpB OS=Listeria monocytogenes GN=clpB PE=3 SV=1)

HSP 1 Score: 347.436 bits (890), Expect = 4.422e-95
Identity = 169/238 (71.01%), Postives = 204/238 (85.71%), Query Frame = 1
Query:    7 EIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EIR  +RILSR+TKNNP LIGEPGVGKTA+VEGLAQRIVR DVP  L D  +I+LD+G+L+AGAKYRGEFEERLKAVL+EV++++G+++LFIDEIH ++GAG+T+G+MDA N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ+V V EP+V DTVSILRGLKE++E HHGV I D ALV AA LS RYIT R LPDKAIDLVDEACA +RV +DS P E+D + RK M L+
Sbjct:  188 EIRNVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLKDKTIISLDIGSLIAGAKYRGEFEERLKAVLQEVKQSDGQILLFIDEIHTIVGAGKTDGAMDAGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVPEPTVEDTVSILRGLKERFEIHHGVNIHDNALVAAASLSNRYITDRFLPDKAIDLVDEACATIRVEIDSMPSELDEVTRKVMQLE 425          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_LISMF (Chaperone protein clpB OS=Listeria monocytogenes serotype 4b (strain F2365) GN=clpB PE=3 SV=1)

HSP 1 Score: 347.436 bits (890), Expect = 4.422e-95
Identity = 169/238 (71.01%), Postives = 204/238 (85.71%), Query Frame = 1
Query:    7 EIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EIR  +RILSR+TKNNP LIGEPGVGKTA+VEGLAQRIVR DVP  L D  +I+LD+G+L+AGAKYRGEFEERLKAVL+EV++++G+++LFIDEIH ++GAG+T+G+MDA N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ+V V EP+V DTVSILRGLKE++E HHGV I D ALV AA LS RYIT R LPDKAIDLVDEACA +RV +DS P E+D + RK M L+
Sbjct:  188 EIRNVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLKDKTIISLDIGSLIAGAKYRGEFEERLKAVLQEVKQSDGQILLFIDEIHTIVGAGKTDGAMDAGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVPEPTVEDTVSILRGLKERFEIHHGVNIHDNALVAAASLSNRYITDRFLPDKAIDLVDEACATIRVEIDSMPSELDEVTRKVMQLE 425          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_LISIN (Chaperone protein clpB OS=Listeria innocua GN=clpB PE=3 SV=1)

HSP 1 Score: 347.436 bits (890), Expect = 4.422e-95
Identity = 169/238 (71.01%), Postives = 204/238 (85.71%), Query Frame = 1
Query:    7 EIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EIR  +RILSR+TKNNP LIGEPGVGKTA+VEGLAQRIVR DVP  L D  +I+LD+G+L+AGAKYRGEFEERLKAVL+EV++++G+++LFIDEIH ++GAG+T+G+MDA N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ+V V EP+V DTVSILRGLKE++E HHGV I D ALV AA LS RYIT R LPDKAIDLVDEACA +RV +DS P E+D + RK M L+
Sbjct:  188 EIRNVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLKDKTIISLDIGSLIAGAKYRGEFEERLKAVLQEVKQSDGQILLFIDEIHTIVGAGKTDGAMDAGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVPEPTVEDTVSILRGLKERFEIHHGVNIHDNALVAAASLSNRYITDRFLPDKAIDLVDEACATIRVEIDSMPSELDEVTRKVMQLE 425          
The following BLAST results are available for this feature:
BLAST of CB610803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
CLPB_STAAW3.385e-9570.71Chaperone protein clpB OS=Staphylococcus aureus (s... [more]
CLPB_STAAS3.385e-9570.71Chaperone protein clpB OS=Staphylococcus aureus (s... [more]
CLPB_STAAR3.385e-9570.71Chaperone protein clpB OS=Staphylococcus aureus (s... [more]
CLPB_STAAN3.385e-9570.71Chaperone protein clpB OS=Staphylococcus aureus (s... [more]
CLPB_STAAM3.385e-9570.71Chaperone protein clpB OS=Staphylococcus aureus (s... [more]
CLPB_STAAC3.385e-9570.71Chaperone protein clpB OS=Staphylococcus aureus (s... [more]
CLPB_LACPL3.385e-9571.55Chaperone protein clpB OS=Lactobacillus plantarum ... [more]
CLPB_LISMO4.422e-9571.01Chaperone protein clpB OS=Listeria monocytogenes G... [more]
CLPB_LISMF4.422e-9571.01Chaperone protein clpB OS=Listeria monocytogenes s... [more]
CLPB_LISIN4.422e-9571.01Chaperone protein clpB OS=Listeria innocua GN=clpB... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0002_IVaF_D06 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IVaF_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610803 ID=CB610803; Name=CB610803; organism=Citrus sinensis; type=EST; length=721bp
GGGGAAGAAATTAGAACGTTTGTTCGAATTCTGTCAAGGAGGACTAAAAA
CAATCCTGCTCTTATTGGAGAGCCAGGAGTTGGTAAAACCGCTGTGGTGG
AAGGATTGGCTCAGAGAATTGTGCGAGGAGATGTGCCTAGCAACCTTGCT
GATGTGAGGCTCATTGCTTTGGATATGGGTGCTCTGGTTGCAGGCGCCAA
GTATAGGGGAGAGTTTGAAGAGAGGTTGAAGGCTGTTCTGAAAGAAGTAG
AAGAAGCTGAGGGAAAAGTGATTTTGTTTATTGATGAGATTCACCTTGTC
CTTGGAGCTGGTCGAACCGAGGGATCAATGGATGCTGCTAACCTCTTTAA
GCCTATGCTTGCAAGAGGCCAGCTTAGATGTATTGGTGCTACCACGCTCG
AGGAGTATAGAAAGTATGTGGAGAAAGACGCTGCATTTGAGAGAAGGTTC
CAACAAGTATATGTGGCTGAACCTAGCGTTCCTGATACAGTTAGCATTCT
TCGTGGATTGAAGGAGAAGTATGAGGGTCATCATGGTGTTCGGATTCAGG
ATCGTGCTCTTGTTGTTGCGGCACAACTATCAGCACGATATATAACAGGA
CGTCATCTCCCAGACAAGGCAATTGATTTGGTTGATGAAGCTTGCGCAAA
TGTGAGGGTNNAGCTTGATAGTCACCCAGAGGAAATTGATAATCTAGAGA
GGAAGAAAATGCCATTAAAGN
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