CB610803

Overview
NameCB610803
Unique NameCB610803
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB2_SYNE7 (Chaperone protein clpB 2 OS=Synechococcus elongatus (strain PCC 7942) GN=clpB2 PE=3 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 1.989e-87
Identity = 157/240 (65.42%), Postives = 201/240 (83.75%), Query Frame = 1
Query:    7 EIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTE--GSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EIR  +++LSRR+KNNP LIGEPGVGKTA+ EGLAQRIV G+VP +L   RLI+LDMG+L+AGAKYRGEFEERL+AVL EV  ++G+++LFIDE+H V+GAG  +   +MDA NL KPMLARG+LRCIGATT +EYR+ +EKD A ERRFQQVYV++PSV DT++ILRGLKE+YEGHHGV+I D AL+ AA+LS RYI+ R LPDKAIDL+DEA A +++ + S P E+++LER+ + L+
Sbjct:  190 EIRRVIQVLSRRSKNNPVLIGEPGVGKTAIAEGLAQRIVAGEVPDSLKQRRLISLDMGSLIAGAKYRGEFEERLRAVLHEVTHSDGQMVLFIDELHTVVGAGAGQQGSAMDAGNLLKPMLARGELRCIGATTTDEYRRTIEKDPALERRFQQVYVSQPSVEDTIAILRGLKERYEGHHGVKITDGALMAAAKLSHRYISDRFLPDKAIDLIDEASAQLKMEITSKPSELEDLERRLLQLE 429          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_DICNO (Chaperone protein clpB OS=Dichelobacter nodosus GN=clpB PE=3 SV=2)

HSP 1 Score: 320.472 bits (820), Expect = 5.788e-87
Identity = 158/239 (66.11%), Postives = 197/239 (82.43%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  ++IL RR+KNNP LIGEPGVGKTA+VEGLAQRI    VP +L   RL++LD+ AL+AG KYRGEFEERLKAVL E+ +A+G++ILFIDEIH ++GAG++EGS+DA N+ KP LARG L CIGATTL+EYR+Y+EKDAA ERRFQ+V V EPSV DT++ILR L+E+YE HHG+ I D ALV AAQLS RYI+GR LPDKAIDL+DEA A +R+ LDS PE +D ++R+ + L+
Sbjct:  189 EEIRRAMQILQRRSKNNPVLIGEPGVGKTAIVEGLAQRIADRAVPESLKGKRLLSLDLAALLAGTKYRGEFEERLKAVLDEITKADGQIILFIDEIHTMVGAGKSEGSLDAGNMLKPALARGDLHCIGATTLDEYRQYMEKDAALERRFQKVIVDEPSVEDTIAILRNLQERYEVHHGINITDPALVAAAQLSHRYISGRKLPDKAIDLMDEAAAQIRMELDSKPEVMDKIDRRLIQLQ 427          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_BORPA (Chaperone protein clpB OS=Bordetella parapertussis GN=clpB PE=3 SV=1)

HSP 1 Score: 319.316 bits (817), Expect = 1.289e-86
Identity = 156/239 (65.27%), Postives = 196/239 (82.01%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            +EIR  ++IL RRTKNNP LIGEPGVGKTA+VEGLAQRIV  +VP  L   R+++LD+ AL+AGAK+RGEFEERLKAVLKE+ + +G+ I+FIDE+H ++GAG+ EG+MDA N+ KP LARG+L CIGATTL+EYRKY+EKDAA ERRFQ+V V EP V  T++ILRGL+E+YE HHGV I D A+V AA+LS RYIT R LPDKAIDL+DEA A +R+ +DS PE +D L+R+ + LK
Sbjct:  184 DEIRRTIQILQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERLKAVLKELAQDDGQNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVGEPDVESTIAILRGLQERYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAGARIRMEIDSKPEVMDRLDRRIIQLK 422          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_BORBR (Chaperone protein clpB OS=Bordetella bronchiseptica GN=clpB PE=3 SV=1)

HSP 1 Score: 319.316 bits (817), Expect = 1.289e-86
Identity = 156/239 (65.27%), Postives = 196/239 (82.01%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            +EIR  ++IL RRTKNNP LIGEPGVGKTA+VEGLAQRIV  +VP  L   R+++LD+ AL+AGAK+RGEFEERLKAVLKE+ + +G+ I+FIDE+H ++GAG+ EG+MDA N+ KP LARG+L CIGATTL+EYRKY+EKDAA ERRFQ+V V EP V  T++ILRGL+E+YE HHGV I D A+V AA+LS RYIT R LPDKAIDL+DEA A +R+ +DS PE +D L+R+ + LK
Sbjct:  184 DEIRRTIQILQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERLKAVLKELAQDDGQNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVGEPDVESTIAILRGLQERYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAGARIRMEIDSKPEVMDRLDRRIIQLK 422          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_BORPE (Chaperone protein clpB OS=Bordetella pertussis GN=clpB PE=3 SV=1)

HSP 1 Score: 318.546 bits (815), Expect = 2.199e-86
Identity = 156/239 (65.27%), Postives = 195/239 (81.59%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            +EIR  ++IL RRTKNNP LIGEPGVGKTA+VEGLAQRIV  +VP  L   R+++LD+ AL+AGAK+RGEFEERLKAVLKE+ + +G+ I+FIDE+H + GAG+ EG+MDA N+ KP LARG+L CIGATTL+EYRKY+EKDAA ERRFQ+V V EP V  T++ILRGL+E+YE HHGV I D A+V AA+LS RYIT R LPDKAIDL+DEA A +R+ +DS PE +D L+R+ + LK
Sbjct:  184 DEIRRTIQILQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERLKAVLKELAQDDGQNIVFIDELHTMAGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVGEPDVESTIAILRGLQERYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAGARIRMEIDSKPEVMDRLDRRIIQLK 422          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_NEIMB (Chaperone protein clpB OS=Neisseria meningitidis serogroup B GN=clpB PE=3 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 3.752e-86
Identity = 150/239 (62.76%), Postives = 197/239 (82.43%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            +EIR  +++L RRTKNNP LIGEPGVGKTA+VEGLAQRIV G+VP +L + RL+ LD+ AL+AGAKYRGEFEERLK VL ++ + +G  ++FIDEIH ++GAG+T+G+MDA N+ KP LARG+L CIGATTL+EYR+Y+EKDAA ERRFQ+V V EPSV DT++ILRGL+E+YE HHG+ I D A+V AA+LS RYIT R LPDKAIDL+DEA + V++  ++ PE +D ++R+ + L+
Sbjct:  185 DEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLR 423          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_NEIMA (Chaperone protein clpB OS=Neisseria meningitidis serogroup A GN=clpB PE=3 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 3.752e-86
Identity = 150/239 (62.76%), Postives = 197/239 (82.43%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            +EIR  +++L RRTKNNP LIGEPGVGKTA+VEGLAQRIV G+VP +L + RL+ LD+ AL+AGAKYRGEFEERLK VL ++ + +G  ++FIDEIH ++GAG+T+G+MDA N+ KP LARG+L CIGATTL+EYR+Y+EKDAA ERRFQ+V V EPSV DT++ILRGL+E+YE HHG+ I D A+V AA+LS RYIT R LPDKAIDL+DEA + V++  ++ PE +D ++R+ + L+
Sbjct:  185 DEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLR 423          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_DEIRA (Chaperone protein clpB OS=Deinococcus radiodurans GN=clpB PE=3 SV=2)

HSP 1 Score: 314.694 bits (805), Expect = 3.176e-85
Identity = 155/239 (64.85%), Postives = 195/239 (81.59%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  ++IL RR+KNNP LIGEPGVGKTA+ EGLA RIV+GDVP  L D ++++L+MG+L+AGAK+RGEFEERLK V+ EV ++ G++ILF+DEIH ++GAG+TEGS DA N+ KP LARG+L  IGATTL+EYR+ +EKDAA ERRFQ V+V EPSV DT+SILRG+KE+Y+ HH V I D ALV AA LS RYIT R LPDKAIDL+DE+ A +R+ L+S PE ID L R+K+ L+
Sbjct:  177 EEIRRVMQILLRRSKNNPVLIGEPGVGKTAIAEGLAMRIVKGDVPEGLRDKKIVSLEMGSLLAGAKFRGEFEERLKGVIDEVVKSAGEIILFVDEIHTIVGAGKTEGSPDAGNMLKPALARGELHLIGATTLDEYRE-IEKDAALERRFQPVFVDEPSVEDTISILRGIKERYQVHHNVEITDPALVAAATLSNRYITDRQLPDKAIDLIDESAARLRMALESSPERIDQLSRRKLQLE 414          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_CHLMU (Chaperone protein clpB OS=Chlamydia muridarum GN=clpB PE=3 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 1.207e-84
Identity = 159/234 (67.95%), Postives = 186/234 (79.49%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERK 705
            EEIR  +++LSRRTKNNP LIGEPGVGKTA+ EGLA RIV+GDVP +L D  L  LDMGAL+AGAKYRGEFEERLK+VLK VE +EG  ILFIDE+H ++GAG T+G+MDAANL KP LARG L CIGATTL EY+KY+EKDAA ERRFQ ++V EPS+ D V ILRGL+EKYE  HGVRI + AL  A  LS RYIT R LPDKAIDL+DEA + +R+ + S P  ID  ER+
Sbjct:  184 EEIRRTIQVLSRRTKNNPMLIGEPGVGKTAIAEGLALRIVQGDVPESLKDKHLYVLDMGALIAGAKYRGEFEERLKSVLKGVEASEGACILFIDEVHTLVGAGATDGAMDAANLLKPALARGTLHCIGATTLNEYQKYIEKDAALERRFQPIFVTEPSLEDAVFILRGLREKYEIFHGVRITEGALNAAVVLSYRYITDRFLPDKAIDLIDEAASLIRMQIGSLPLPIDEKERE 417          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_CHLTR (Chaperone protein clpB OS=Chlamydia trachomatis GN=clpB PE=3 SV=1)

HSP 1 Score: 311.997 bits (798), Expect = 2.059e-84
Identity = 158/234 (67.52%), Postives = 187/234 (79.91%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERK 705
            EEIR  +++LSRRTKNNP LIGEPGVGKTA+ EGLA RIV+GDVP +L +  L  LDMGAL+AGAKYRGEFEERLK+VLK VE +EG+ ILFIDE+H ++GAG T+G+MDAANL KP LARG L CIGATTL EY+KY+EKDAA ERRFQ ++V EPS+ D V ILRGL+EKYE  HGVRI + AL  A  LS RYIT R LPDKAIDL+DEA + +R+ + S P  ID  ER+
Sbjct:  184 EEIRRTIQVLSRRTKNNPMLIGEPGVGKTAIAEGLALRIVQGDVPESLKEKHLYVLDMGALIAGAKYRGEFEERLKSVLKGVEASEGECILFIDEVHTLVGAGATDGAMDAANLLKPALARGTLHCIGATTLNEYQKYIEKDAALERRFQPIFVTEPSLEDAVFILRGLREKYEIFHGVRITEGALNAAVVLSYRYITDRFLPDKAIDLIDEAASLIRMQIGSLPLPIDEKERE 417          
The following BLAST results are available for this feature:
BLAST of CB610803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
CLPB2_SYNE71.989e-8765.42Chaperone protein clpB 2 OS=Synechococcus elongatu... [more]
CLPB_DICNO5.788e-8766.11Chaperone protein clpB OS=Dichelobacter nodosus GN... [more]
CLPB_BORPA1.289e-8665.27Chaperone protein clpB OS=Bordetella parapertussis... [more]
CLPB_BORBR1.289e-8665.27Chaperone protein clpB OS=Bordetella bronchiseptic... [more]
CLPB_BORPE2.199e-8665.27Chaperone protein clpB OS=Bordetella pertussis GN=... [more]
CLPB_NEIMB3.752e-8662.76Chaperone protein clpB OS=Neisseria meningitidis s... [more]
CLPB_NEIMA3.752e-8662.76Chaperone protein clpB OS=Neisseria meningitidis s... [more]
CLPB_DEIRA3.176e-8564.85Chaperone protein clpB OS=Deinococcus radiodurans ... [more]
CLPB_CHLMU1.207e-8467.95Chaperone protein clpB OS=Chlamydia muridarum GN=c... [more]
CLPB_CHLTR2.059e-8467.52Chaperone protein clpB OS=Chlamydia trachomatis GN... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0002_IVaF_D06 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IVaF_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610803 ID=CB610803; Name=CB610803; organism=Citrus sinensis; type=EST; length=721bp
GGGGAAGAAATTAGAACGTTTGTTCGAATTCTGTCAAGGAGGACTAAAAA
CAATCCTGCTCTTATTGGAGAGCCAGGAGTTGGTAAAACCGCTGTGGTGG
AAGGATTGGCTCAGAGAATTGTGCGAGGAGATGTGCCTAGCAACCTTGCT
GATGTGAGGCTCATTGCTTTGGATATGGGTGCTCTGGTTGCAGGCGCCAA
GTATAGGGGAGAGTTTGAAGAGAGGTTGAAGGCTGTTCTGAAAGAAGTAG
AAGAAGCTGAGGGAAAAGTGATTTTGTTTATTGATGAGATTCACCTTGTC
CTTGGAGCTGGTCGAACCGAGGGATCAATGGATGCTGCTAACCTCTTTAA
GCCTATGCTTGCAAGAGGCCAGCTTAGATGTATTGGTGCTACCACGCTCG
AGGAGTATAGAAAGTATGTGGAGAAAGACGCTGCATTTGAGAGAAGGTTC
CAACAAGTATATGTGGCTGAACCTAGCGTTCCTGATACAGTTAGCATTCT
TCGTGGATTGAAGGAGAAGTATGAGGGTCATCATGGTGTTCGGATTCAGG
ATCGTGCTCTTGTTGTTGCGGCACAACTATCAGCACGATATATAACAGGA
CGTCATCTCCCAGACAAGGCAATTGATTTGGTTGATGAAGCTTGCGCAAA
TGTGAGGGTNNAGCTTGATAGTCACCCAGAGGAAATTGATAATCTAGAGA
GGAAGAAAATGCCATTAAAGN
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