CB610803
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPC_STAES (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus epidermidis (strain ATCC 12228) GN=clpC PE=3 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 2.879e-78 Identity = 140/234 (59.83%), Postives = 184/234 (78.63%), Query Frame = 1 Query: 4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERK 705 +EI + +LSRRTKNNP LIGEPGVGKTA+ EGLAQ IV+ +VP L D R+++LDMG +VAG KYRGEFEERLK V++E+ +A G VILFIDE+H ++GAG EG++DA+N+ KP LARG+L+CIGATTL+EYRK +EKDAA ERRFQ + V EP+V DT+ IL+GL+++YE HH + I D AL AA+LS RY++ R LPDKAIDL+DEA + VR+ + P + +E++ Sbjct: 187 KEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVKNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQA-GNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPIQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALEAAAKLSDRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPSNLKEIEQE 419
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPC_STAEQ (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=clpC PE=3 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 2.879e-78 Identity = 140/234 (59.83%), Postives = 184/234 (78.63%), Query Frame = 1 Query: 4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERK 705 +EI + +LSRRTKNNP LIGEPGVGKTA+ EGLAQ IV+ +VP L D R+++LDMG +VAG KYRGEFEERLK V++E+ +A G VILFIDE+H ++GAG EG++DA+N+ KP LARG+L+CIGATTL+EYRK +EKDAA ERRFQ + V EP+V DT+ IL+GL+++YE HH + I D AL AA+LS RY++ R LPDKAIDL+DEA + VR+ + P + +E++ Sbjct: 187 KEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVKNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQA-GNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPIQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALEAAAKLSDRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPSNLKEIEQE 419
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_HELHP (Chaperone protein clpB OS=Helicobacter hepaticus GN=clpB PE=3 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 2.879e-78 Identity = 147/233 (63.09%), Postives = 185/233 (79.40%), Query Frame = 1 Query: 4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLER 702 +EI ++IL R++KNNP L+GEPGVGKTAVVEGLAQRIV VP++L + +LIALDM AL+AGAKYRGEFEERLK V+ EV++A G +ILFIDEIH ++GAG +EGSMDAAN+ KP LARG+L IGATTL+EYRKY EKDAA RRFQ + V EPS+ + + ILRG+K E HH V I D ALV AA+LS+RYIT R LPDKAIDL+DEA A +++ ++S P E+ +++ Sbjct: 185 DEINAMMQILIRKSKNNPILLGEPGVGKTAVVEGLAQRIVAKAVPTSLQNKKLIALDMSALIAGAKYRGEFEERLKNVVDEVKKA-GNIILFIDEIHTIVGAGASEGSMDAANILKPALARGELHTIGATTLKEYRKYFEKDAALTRRFQPINVNEPSINEALQILRGIKPNLEAHHNVNITDAALVAAAKLSSRYITDRFLPDKAIDLIDEAAAELKMQIESEPLELSKIKK 416
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPC_STAAW (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain MW2) GN=clpC PE=3 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 3.760e-78 Identity = 141/234 (60.26%), Postives = 184/234 (78.63%), Query Frame = 1 Query: 4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERK 705 +EI + +LSRRTKNNP LIGEPGVGKTA+ EGLAQ IV +VP L D R+++LDMG +VAG KYRGEFEERLK V++E+++A G VILFIDE+H ++GAG EG++DA+N+ KP LARG+L+CIGATTL+EYRK +EKDAA ERRFQ V V EPSV DTV+IL+GL+++YE HH + I D A+ A +LS RY++ R LPDKAIDL+DEA + VR+ + P + +E++ Sbjct: 187 KEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQA-GNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQE 419
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPC_STAAS (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain MSSA476) GN=clpC PE=3 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 3.760e-78 Identity = 141/234 (60.26%), Postives = 184/234 (78.63%), Query Frame = 1 Query: 4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERK 705 +EI + +LSRRTKNNP LIGEPGVGKTA+ EGLAQ IV +VP L D R+++LDMG +VAG KYRGEFEERLK V++E+++A G VILFIDE+H ++GAG EG++DA+N+ KP LARG+L+CIGATTL+EYRK +EKDAA ERRFQ V V EPSV DTV+IL+GL+++YE HH + I D A+ A +LS RY++ R LPDKAIDL+DEA + VR+ + P + +E++ Sbjct: 187 KEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQA-GNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQE 419
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPC_STAAR (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain MRSA252) GN=clpC PE=3 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 3.760e-78 Identity = 141/234 (60.26%), Postives = 184/234 (78.63%), Query Frame = 1 Query: 4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERK 705 +EI + +LSRRTKNNP LIGEPGVGKTA+ EGLAQ IV +VP L D R+++LDMG +VAG KYRGEFEERLK V++E+++A G VILFIDE+H ++GAG EG++DA+N+ KP LARG+L+CIGATTL+EYRK +EKDAA ERRFQ V V EPSV DTV+IL+GL+++YE HH + I D A+ A +LS RY++ R LPDKAIDL+DEA + VR+ + P + +E++ Sbjct: 187 KEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQA-GNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQE 419
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPC_STAAN (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain N315) GN=clpC PE=1 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 3.760e-78 Identity = 141/234 (60.26%), Postives = 184/234 (78.63%), Query Frame = 1 Query: 4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERK 705 +EI + +LSRRTKNNP LIGEPGVGKTA+ EGLAQ IV +VP L D R+++LDMG +VAG KYRGEFEERLK V++E+++A G VILFIDE+H ++GAG EG++DA+N+ KP LARG+L+CIGATTL+EYRK +EKDAA ERRFQ V V EPSV DTV+IL+GL+++YE HH + I D A+ A +LS RY++ R LPDKAIDL+DEA + VR+ + P + +E++ Sbjct: 187 KEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQA-GNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQE 419
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPC_STAAM (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=clpC PE=1 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 3.760e-78 Identity = 141/234 (60.26%), Postives = 184/234 (78.63%), Query Frame = 1 Query: 4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERK 705 +EI + +LSRRTKNNP LIGEPGVGKTA+ EGLAQ IV +VP L D R+++LDMG +VAG KYRGEFEERLK V++E+++A G VILFIDE+H ++GAG EG++DA+N+ KP LARG+L+CIGATTL+EYRK +EKDAA ERRFQ V V EPSV DTV+IL+GL+++YE HH + I D A+ A +LS RY++ R LPDKAIDL+DEA + VR+ + P + +E++ Sbjct: 187 KEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQA-GNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQE 419
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPC_STAAC (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain COL) GN=clpC PE=3 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 3.760e-78 Identity = 141/234 (60.26%), Postives = 184/234 (78.63%), Query Frame = 1 Query: 4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERK 705 +EI + +LSRRTKNNP LIGEPGVGKTA+ EGLAQ IV +VP L D R+++LDMG +VAG KYRGEFEERLK V++E+++A G VILFIDE+H ++GAG EG++DA+N+ KP LARG+L+CIGATTL+EYRK +EKDAA ERRFQ V V EPSV DTV+IL+GL+++YE HH + I D A+ A +LS RY++ R LPDKAIDL+DEA + VR+ + P + +E++ Sbjct: 187 KEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQA-GNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQE 419
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPC_STAAB (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=clpC PE=3 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 3.760e-78 Identity = 141/234 (60.26%), Postives = 184/234 (78.63%), Query Frame = 1 Query: 4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERK 705 +EI + +LSRRTKNNP LIGEPGVGKTA+ EGLAQ IV +VP L D R+++LDMG +VAG KYRGEFEERLK V++E+++A G VILFIDE+H ++GAG EG++DA+N+ KP LARG+L+CIGATTL+EYRK +EKDAA ERRFQ V V EPSV DTV+IL+GL+++YE HH + I D A+ A +LS RY++ R LPDKAIDL+DEA + VR+ + P + +E++ Sbjct: 187 KEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQA-GNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQE 419 The following BLAST results are available for this feature:
BLAST of CB610803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 194
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB610803 ID=CB610803; Name=CB610803; organism=Citrus sinensis; type=EST; length=721bpback to top |