CB610803
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPC_STAA8 (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain NCTC 8325) GN=clpC PE=1 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 3.760e-78 Identity = 141/234 (60.26%), Postives = 184/234 (78.63%), Query Frame = 1 Query: 4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERK 705 +EI + +LSRRTKNNP LIGEPGVGKTA+ EGLAQ IV +VP L D R+++LDMG +VAG KYRGEFEERLK V++E+++A G VILFIDE+H ++GAG EG++DA+N+ KP LARG+L+CIGATTL+EYRK +EKDAA ERRFQ V V EPSV DTV+IL+GL+++YE HH + I D A+ A +LS RY++ R LPDKAIDL+DEA + VR+ + P + +E++ Sbjct: 187 KEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQA-GNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQE 419
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPC_STAA3 (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain USA300) GN=clpC PE=3 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 3.760e-78 Identity = 141/234 (60.26%), Postives = 184/234 (78.63%), Query Frame = 1 Query: 4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERK 705 +EI + +LSRRTKNNP LIGEPGVGKTA+ EGLAQ IV +VP L D R+++LDMG +VAG KYRGEFEERLK V++E+++A G VILFIDE+H ++GAG EG++DA+N+ KP LARG+L+CIGATTL+EYRK +EKDAA ERRFQ V V EPSV DTV+IL+GL+++YE HH + I D A+ A +LS RY++ R LPDKAIDL+DEA + VR+ + P + +E++ Sbjct: 187 KEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQA-GNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQE 419
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: HS104_YEAST (Heat shock protein 104 OS=Saccharomyces cerevisiae GN=HSP104 PE=1 SV=2) HSP 1 Score: 290.426 bits (742), Expect = 6.414e-78 Identity = 145/234 (61.97%), Postives = 184/234 (78.63%), Query Frame = 1 Query: 4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERK 705 EEIR+ +R+L+RR K+NP LIGEPG+GKTA++EG+AQRI+ DVP+ L +L +LD+ AL AGAKY+G+FEER K VLKE+EE++ ++LFIDEIH+++G G+ DAAN+ KP L+RGQL+ IGATT EYR VEKD AFERRFQ++ VAEPSV TV+ILRGL+ KYE HHGVRI D ALV AAQL+ RY+ R LPD A+DLVD +CA V V DS PEE+D+ ER+ Sbjct: 191 EEIRSTIRVLARRIKSNPCLIGEPGIGKTAIIEGVAQRIIDDDVPTILQGAKLFSLDLAALTAGAKYKGDFEERFKGVLKEIEESKTLIVLFIDEIHMLMGNGKD----DAANILKPALSRGQLKVIGATTNNEYRSIVEKDGAFERRFQKIEVAEPSVRQTVAILRGLQPKYEIHHGVRILDSALVTAAQLAKRYLPYRRLPDSALDLVDISCAGVAVARDSKPEELDSKERQ 420
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_OCEIH (Chaperone protein clpB OS=Oceanobacillus iheyensis GN=clpB PE=3 SV=1) HSP 1 Score: 290.426 bits (742), Expect = 6.414e-78 Identity = 141/234 (60.26%), Postives = 183/234 (78.21%), Query Frame = 1 Query: 4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERK 705 +EI +++LSRRTKNNP LIGEPGVGKTAV EGLAQ+I+ +VP L D R++ LDMG +VAG KYRGEFE+RLK V++E+ +A G +ILFIDE+H ++GAG EG++DA+N+ KP LARG+L+CIGATTL+EYRKY+EKDAA ERRFQ + V EP++ +T+ IL GL+++YE HH V I D A+ AA LS RYIT R LPDKAIDL+DEA + VR+ + P + LE+K Sbjct: 190 KEIERVIQVLSRRTKNNPVLIGEPGVGKTAVAEGLAQQIIDNEVPETLRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMEEIRQA-GNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVDEPTLEETIQILNGLRDRYEAHHRVTITDEAIEAAASLSDRYITDRFLPDKAIDLIDEAGSKVRLRSYTVPPNLKELEQK 422
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPC_STAS1 (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=clpC PE=3 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 1.094e-77 Identity = 141/234 (60.26%), Postives = 183/234 (78.21%), Query Frame = 1 Query: 4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERK 705 +EI + +LSRRTKNNP LIGEPGVGKTA+ EGLAQ IV +VP L R+++LDMG +VAG KYRGEFEERLK V++E+ +A G VILFIDE+H ++GAG EG++DA+N+ KP LARG+L+CIGATTL+EYRK +EKDAA ERRFQ V V EP+V DT+ IL+GL+++YE HH + I D ALV AA+LS RY++ R LPDKAIDL+DEA + VR+ + P + +E++ Sbjct: 187 KEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKGKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQA-GNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPVQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALVSAAKLSHRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPPNLKEIEQQ 419
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPAB_SOLLC (ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic OS=Solanum lycopersicum GN=CD4B PE=3 SV=1) HSP 1 Score: 286.96 bits (733), Expect = 7.092e-77 Identity = 141/233 (60.52%), Postives = 182/233 (78.11%), Query Frame = 1 Query: 7 EIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERK 705 +I +IL RRTKNNP LIGEPGVGKTA+ EGLAQRI GDVP + ++I LDMG LVAG KYRGEFEERLK +++E+++++ ++ILFIDE+H ++GAG EG++DAAN+ KP LARG+L+CIGATTL+EYRK++EKD A ERRFQ V V EP+V +T+ IL+GL+E+YE HH +R D LV AAQLS +YI+ R LPDKAIDL+DEA + VR+ PEE LE++ Sbjct: 280 QIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD-EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDEDLVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAKELEKE 511
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_MYCGA (Chaperone protein clpB OS=Mycoplasma gallisepticum GN=clpB PE=3 SV=1) HSP 1 Score: 286.574 bits (732), Expect = 9.262e-77 Identity = 135/236 (57.20%), Postives = 186/236 (78.81%), Query Frame = 1 Query: 4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGR--TEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERK 705 EEIR + ILSR+ KNNP LIGEPGVGKTA+VEG A++IV GDVP NL DV ++ L + +L+AG +++G FEERL +LKEV+ + GKVILFIDEIH ++G G+ + +MDAAN+ KPM+ARG+++ IGATT++EYRKY+EKD A ERR Q++ V EP+ + ++I+RGL+E++E H VRI D ALV A ++SARYI+ R+LPDKAIDL+DEA A ++ + S P E+DN+++K Sbjct: 38 EEIRRLIEILSRKNKNNPVLIGEPGVGKTAIVEGFARKIVNGDVPDNLKDVEVVELSLSSLIAGTQFQGSFEERLNKILKEVKNSSGKVILFIDEIHQLVGMGKNSSNSAMDAANILKPMMARGEIKVIGATTIDEYRKYIEKDGALERRMQKILVDEPTKQEALTIMRGLRERWEAFHKVRIFDDALVAAVEMSARYISDRYLPDKAIDLIDEAAAKIKTLIHSLPPELDNIKQK 273
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPC_MYCTU (Probable ATP-dependent Clp protease ATP-binding subunit OS=Mycobacterium tuberculosis GN=clpC PE=1 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 1.210e-76 Identity = 142/234 (60.68%), Postives = 181/234 (77.35%), Query Frame = 1 Query: 4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERK 705 +EI +++LSRRTKNNP LIGEPGVGKTAVVEGLAQ IV G+VP L D +L LD+G+LVAG++YRG+FEERLK VLKE+ G +ILFIDE+H ++GAG EG++DAA++ KP LARG+L+ IGATTL+EYRKY+EKDAA ERRFQ V V EP+V T+ IL+GL+++YE HH V I D A+V AA L+ RYI R LPDKAIDL+DEA A +R+ + P ++ + K Sbjct: 195 KEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEIN-TRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEK 427
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPC_MYCLE (Probable ATP-dependent Clp protease ATP-binding subunit OS=Mycobacterium leprae GN=clpC PE=3 SV=2) HSP 1 Score: 286.189 bits (731), Expect = 1.210e-76 Identity = 142/234 (60.68%), Postives = 181/234 (77.35%), Query Frame = 1 Query: 4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERK 705 +EI +++LSRRTKNNP LIGEPGVGKTAVVEGLAQ IV G+VP L D +L LD+G+LVAG++YRG+FEERLK VLKE+ G +ILFIDE+H ++GAG EG++DAA++ KP LARG+L+ IGATTL+EYRKY+EKDAA ERRFQ V V EP+V T+ IL+GL+++YE HH V I D A+V AA L+ RYI R LPDKAIDL+DEA A +R+ + P ++ + K Sbjct: 195 KEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEIN-TRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDSAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEK 427
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPC_MYCBO (Probable ATP-dependent Clp protease ATP-binding subunit OS=Mycobacterium bovis GN=clpC PE=3 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 1.210e-76 Identity = 142/234 (60.68%), Postives = 181/234 (77.35%), Query Frame = 1 Query: 4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERK 705 +EI +++LSRRTKNNP LIGEPGVGKTAVVEGLAQ IV G+VP L D +L LD+G+LVAG++YRG+FEERLK VLKE+ G +ILFIDE+H ++GAG EG++DAA++ KP LARG+L+ IGATTL+EYRKY+EKDAA ERRFQ V V EP+V T+ IL+GL+++YE HH V I D A+V AA L+ RYI R LPDKAIDL+DEA A +R+ + P ++ + K Sbjct: 195 KEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEIN-TRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEK 427 The following BLAST results are available for this feature:
BLAST of CB610803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 194
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Sequences
The
following sequences are available for this feature:
EST sequence >CB610803 ID=CB610803; Name=CB610803; organism=Citrus sinensis; type=EST; length=721bpback to top |