CB610803
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPL_STAAR (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain MRSA252) GN=clpL PE=3 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 2.008e-55 Identity = 113/245 (46.12%), Postives = 164/245 (66.94%), Query Frame = 1 Query: 4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT---EGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANV--------RVXLDSHPEEIDNLERK 705 +EI+ +LSRRTKNNP L+GE GVGKTA+VEGLAQ IV G+VP+ + D +I++D+ +L AG +YRG FEE ++ +++ V+ ++ V LF DEIH ++G+G T GS +++ KP L+RG++ IGATT +EYR + KDAA RRF +V V EPS DTV IL+G++EK+E HH V++ D L LS +YI R LPDKAID++D A++ +V + E+++ +RK Sbjct: 105 KEIQETAEVLSRRTKNNPILVGEAGVGKTAIVEGLAQAIVEGNVPAAIKDKEIISIDISSLEAGTQYRGAFEENIQKLVEGVKSSQNAV-LFFDEIHQIIGSGATGSDSGSKGLSDILKPALSRGEISIIGATTQDEYRNNIMKDAALTRRFNEVLVNEPSAKDTVEILKGIREKFETHHQVKLPDDVLKACVDLSIQYIPQRLLPDKAIDVLDITAAHLSAQSPAIDKVTTEKRISELEHDKRK 348
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPL_STAAB (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=clpL PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.622e-55 Identity = 113/245 (46.12%), Postives = 164/245 (66.94%), Query Frame = 1 Query: 4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT---EGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANV--------RVXLDSHPEEIDNLERK 705 +EI+ +LSRRTKNNP L+GE GVGKTA+VEGLAQ IV G+VP+ + D +I++D+ +L AG +YRG FEE ++ +++ V+ ++ V LF DEIH ++G+G T GS +++ KP L+RG++ IGATT +EYR + KDAA RRF +V V EPS DTV IL+G++EK+E HH V++ D L LS +YI R LPDKAID++D A++ +V + E+++ +RK Sbjct: 105 KEIQETAEVLSRRTKNNPILVGEAGVGKTAIVEGLAQAIVEGNVPAAIKDKEIISIDISSLEAGTQYRGAFEENIQKLVEGVKSSQNAV-LFFDEIHQIIGSGATGSDSGSKGLSDILKPALSRGEISIIGATTQDEYRNNILKDAALTRRFNEVLVNEPSAKDTVEILKGIREKFETHHQVKLPDDVLKACVDLSIQYIPQRLLPDKAIDVLDITAAHLSAQSPAIDKVATEKRISELEHDKRK 348
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPC_STRP6 (Probable ATP-dependent Clp protease ATP-binding subunit OS=Streptococcus pyogenes serotype M6 GN=clpC PE=1 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 4.473e-55 Identity = 110/220 (50.00%), Postives = 151/220 (68.64%), Query Frame = 1 Query: 4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTE---GSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANV 654 +EI+ IL+RRTKNNP L+G+ GVGKTAV+EGLAQ IV GDVP+ + + ++++D+ +L AG +YRG FEE ++ +++EV+EA G +ILF DEIH ++GAG T GS A++ KP L+RG+L IGATT +EYR + K+AA RRF +V V PS DT IL G++ YE HH + + D L A S +YI R LPDKAIDL+D A++ Sbjct: 100 KEIQDTAEILARRTKNNPVLVGDAGVGKTAVIEGLAQAIVNGDVPAAIKNKEIVSIDISSLEAGTQYRGSFEETIQNLIQEVKEA-GNIILFFDEIHQIVGAGATSSDSGSKGLADILKPALSRGELTLIGATTQDEYRNTILKNAALARRFNEVKVNAPSAEDTFHILMGIRNLYEQHHHITLPDNVLKAAVDYSIQYIPQRSLPDKAIDLLDMTAAHL 318
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPL_LACLA (ATP-dependent Clp protease ATP-binding subunit clpL OS=Lactococcus lactis subsp. lactis GN=clpL PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 8.730e-51 Identity = 111/241 (46.06%), Postives = 149/241 (61.83%), Query Frame = 1 Query: 7 EIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS--MDAANLFKPMLAR-GQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720 EI+ + RR K NP L+GE GVGKTAVVEGLAQRIV G VP + D + ++D+ +L AG +YRG FEE +K +++EV+ A G +ILFIDEIH +LG G G A++ KP+L +L IGATT +EYR + K+AA RRF V + EP+ DT+ IL+G+KE YE HH V + D A S +YI RHLPDKAIDL+D+ + + E +D + K L+ Sbjct: 161 EIQKPAQKFCRRRKKNPLLVGESGVGKTAVVEGLAQRIVAGKVPETIQDKEIYSIDLSSLEAGTQYRGSFEENIKQLVEEVKAA-GNIILFIDEIHQILGTGALAGEEVKGLADIIKPLLCHVAKLSVIGATTQDEYRNTILKNAALARRFNDVVINEPTAADTLRILQGIKELYEKHHHVVLPDDEKKAAVDYSIKYIHNRHLPDKAIDLIDDCGSFSGKNSQTDVETLDQRLKNKRQLR 400 The following BLAST results are available for this feature:
BLAST of CB610803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 194
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Sequences
The
following sequences are available for this feature:
EST sequence >CB610803 ID=CB610803; Name=CB610803; organism=Citrus sinensis; type=EST; length=721bpback to top |