CB610803

Overview
NameCB610803
Unique NameCB610803
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_CLOAB (Chaperone protein clpB OS=Clostridium acetobutylicum GN=clpB PE=3 SV=1)

HSP 1 Score: 347.436 bits (890), Expect = 4.422e-95
Identity = 171/234 (73.08%), Postives = 201/234 (85.90%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERK 705
            EEIR  +RILSRRTKNNP LIGEPGVGKTA+VEGLA+RIVRGDVP  L +  + +LDMG+LVAGAKYRGEFEERLKAVLKEVE +EGK+ILFIDEIH ++GAG+TEG+MDA N+ KPMLARG+L CIGATT +EYRKY+EKD A ERRFQ+V + EP+V D +SILRGLKE++E HHGVRI D A+V AA+LS RYITGR LPDKAIDL+DEA A VR+ +DS P E+D L+RK
Sbjct:  189 EEIRRVIRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIVRGDVPEGLKNKIIFSLDMGSLVAGAKYRGEFEERLKAVLKEVERSEGKIILFIDEIHTIVGAGKTEGAMDAGNIIKPMLARGELHCIGATTFDEYRKYIEKDKALERRFQKVQIDEPTVDDAISILRGLKERFEIHHGVRIHDNAIVAAAKLSDRYITGRFLPDKAIDLIDEAGAMVRMEIDSMPTELDMLKRK 422          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: HSP98_NEUCR (Heat shock protein hsp98 OS=Neurospora crassa GN=hsp98 PE=1 SV=2)

HSP 1 Score: 347.051 bits (889), Expect = 5.775e-95
Identity = 177/240 (73.75%), Postives = 201/240 (83.75%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  +RILSRRTKNNP LIGEPGVGKT VVEGLAQRIV  DVP NLA+ +L++LD+GALVAG+KYRGEFEER+K VLKE+ E++  +ILFIDEIHL++GAG + EG MDAANL KPMLARGQL CIGATTL EYRKY+EKDAAFERRFQQV V EPSV +T+SILRGLKEKYE HHGV I D A+V AA L+ARY+T R LPD AIDL+DEA A VRV  +S PE ID+LERK   LK
Sbjct:  203 EEIRRVIRILSRRTKNNPVLIGEPGVGKTTVVEGLAQRIVNADVPDNLANCKLLSLDVGALVAGSKYRGEFEERMKGVLKEISESKEMIILFIDEIHLLMGAGASGEGGMDAANLLKPMLARGQLHCIGATTLAEYRKYIEKDAAFERRFQQVIVKEPSVSETISILRGLKEKYEVHHGVTISDAAIVAAANLAARYLTSRRLPDSAIDLIDEAAAAVRVARESQPEIIDSLERKLRQLK 442          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_GLOVI (Chaperone protein clpB OS=Gloeobacter violaceus GN=clpB PE=3 SV=1)

HSP 1 Score: 345.895 bits (886), Expect = 1.286e-94
Identity = 171/239 (71.55%), Postives = 204/239 (85.36%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  ++ILSRRTKNNP LIGEPGVGKTA+ EGLAQRIV GDVP +L   +LIALDMGAL+AG+KYRGEFEERLKAVL EV ++EG+++LFIDEIH V+GAG T+G+MDA NL KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +P+V DT+SILRGLKE+YE HHGVRI D ALV AA LS RYI+ R LPDKAIDL+DEA A +++ + S PE +D ++RK + L+
Sbjct:  188 EEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVSGDVPESLQGRKLIALDMGALIAGSKYRGEFEERLKAVLNEVTKSEGQIVLFIDEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPTVEDTISILRGLKERYEVHHGVRISDSALVAAAVLSHRYISDRFLPDKAIDLMDEAAAKLKMEITSKPEALDEVDRKILQLE 426          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_RICCN (Chaperone protein clpB OS=Rickettsia conorii GN=clpB PE=3 SV=1)

HSP 1 Score: 344.739 bits (883), Expect = 2.866e-94
Identity = 165/239 (69.04%), Postives = 204/239 (85.36%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  V++LSRR KNNP LIGEPGVGKTA++EGLAQRI   DVP +L + R+I LDMGAL+AGAKYRGEFEERLKAVL E++E+ G++ILFIDE+HL++G G+T+G+MDA+NL KPMLARG+L CIGATTL+EYRKY+EKDAA  RRFQ VYV+EP+V DT+SILRG+KEKYE HH VRI D A+V AA LS RYIT R+LPDKAIDL+DEAC+ +++ L S PEE+D L+R+ + +K
Sbjct:  186 EEIRRTVQVLSRRMKNNPVLIGEPGVGKTAIIEGLAQRIFSKDVPESLINCRIIELDMGALIAGAKYRGEFEERLKAVLSEIKESSGEIILFIDELHLLVGTGKTDGAMDASNLLKPMLARGELHCIGATTLDEYRKYIEKDAALARRFQPVYVSEPTVEDTISILRGIKEKYELHHAVRISDSAIVAAATLSNRYITDRYLPDKAIDLIDEACSRMKIELSSKPEELDELDRRIIQIK 424          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_RICBR (Chaperone protein clpB OS=Rickettsia bellii (strain RML369-C) GN=clpB PE=3 SV=1)

HSP 1 Score: 344.739 bits (883), Expect = 2.866e-94
Identity = 166/239 (69.46%), Postives = 203/239 (84.94%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  V++LSRR KNNP LIGEPGVGKTA++EGLAQRI   DVP  L + R+I LDMGAL+AGAKYRGEFEERLKAVL E++E+ G++ILFIDE+HL++G G+T+G+MDA+NL KPMLARG+L CIGATTL+EYRKY+EKDAAF RRFQ VYV+EP+V DT+SILRG+KEKYE HH VRI D A+V AA LS RYIT R LPDKAIDL+DEAC+ +++ L S PEE+D L+R+ + +K
Sbjct:  186 EEIRRTVQVLSRRMKNNPVLIGEPGVGKTAIIEGLAQRIFSKDVPETLINCRIIELDMGALIAGAKYRGEFEERLKAVLGEIKESSGEIILFIDELHLLVGTGKTDGAMDASNLLKPMLARGELHCIGATTLDEYRKYIEKDAAFARRFQPVYVSEPTVEDTISILRGIKEKYELHHAVRISDSAIVAAATLSNRYITDRFLPDKAIDLIDEACSRMKIELSSKPEELDELDRRIIQIK 424          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_BRUME (Chaperone protein clpB OS=Brucella melitensis GN=clpB PE=3 SV=2)

HSP 1 Score: 344.739 bits (883), Expect = 2.866e-94
Identity = 170/239 (71.13%), Postives = 202/239 (84.52%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  +++LSRRTKNNP LIGEPGVGKTA+ EGLA RIV GDVP +L D +L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ A G++ILFIDE+H ++GAG+T+G+MDA+NL KP LARG+L C+GATTLEEYRKYVEKDAA  RRFQ V+V EP+V DT+SILRGLKEKYE HH VR+ D ALV AA LS RYIT R LPDKAIDLVDEA + +R+ +DS PEE+D ++R+ M LK
Sbjct:  186 EEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDKQLMALDMGALIAGAKYRGEFEERLKAVLSEVQTAAGQIILFIDEMHTLVGAGKTDGAMDASNLLKPALARGELHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTVEDTISILRGLKEKYEQHHKVRVSDSALVAAAMLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEIDRRIMQLK 424          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_BRUSU (Chaperone protein clpB OS=Brucella suis GN=clpB PE=2 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 3.743e-94
Identity = 170/239 (71.13%), Postives = 202/239 (84.52%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  +++LSRRTKNNP LIGEPGVGKTA+ EGLA RIV GDVP +L D +L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ A G++ILFIDE+H ++GAG+T+G+MDA+NL KP LARG+L C+GATTLEEYRKYVEKDAA  RRFQ V+V EP+V DT+SILRGLKEKYE HH VR+ D ALV AA LS RYIT R LPDKAIDLVDEA + +R+ +DS PEE+D ++R+ M LK
Sbjct:  186 EEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDKQLMALDMGALIAGAKYRGEFEERLKAVLSEVQTAAGQIILFIDEMHTLVGAGKTDGAMDASNLLKPALARGELHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTVEDTISILRGLKEKYEQHHKVRVSDSALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMHVDSKPEELDEIDRRIMQLK 424          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB2_SYNY3 (Chaperone protein clpB 2 OS=Synechocystis sp. (strain PCC 6803) GN=clpB2 PE=3 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 3.743e-94
Identity = 170/239 (71.13%), Postives = 204/239 (85.36%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EE+R  ++ILSRRTKNNP LIGEPGVGKTA+ EGLAQRI+  DVP +L D +LI+LDMGAL+AGAKYRGEFEERLKAVLKEV +++G++ILFIDEIH V+GAG T+G+MDA NL KPMLARG LRCIGATTL+EYRKY+EKDAA ERRFQ+V V EP+V DT+SILRGLKE+YE HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDEA A +++ + S PEE+D ++RK + L+
Sbjct:  187 EEVRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIINHDVPESLRDRKLISLDMGALIAGAKYRGEFEERLKAVLKEVTDSQGQIILFIDEIHTVVGAGATQGAMDAGNLLKPMLARGALRCIGATTLDEYRKYIEKDAALERRFQEVLVDEPNVLDTISILRGLKERYEVHHGVKIADSALVAAAMLSNRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEVDRKILQLE 425          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_CLOTE (Chaperone protein clpB OS=Clostridium tetani GN=clpB PE=3 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 6.385e-94
Identity = 166/234 (70.94%), Postives = 201/234 (85.90%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERK 705
            EEIR  VRILSRRTKNNP LIG+PGVGKTA++EGLA+RIVRGDVP  L +  + +LDMGAL+AGAK+RGEFEERLKAVLKEVE ++GK+ILFIDEIH ++GAG+TEGSMDA NL KPMLARG+L CIGATT +EYRKY+EKD A ERRFQ V + EP+V DT+SI+RGLKE++E HHG+RI D A+V AA+LS RYIT R+LPDKAIDL+DEA A +R  +DS P E+D+++RK
Sbjct:  189 EEIRRIVRILSRRTKNNPVLIGDPGVGKTAIIEGLAERIVRGDVPEGLKNKIIFSLDMGALIAGAKFRGEFEERLKAVLKEVENSQGKIILFIDEIHNIVGAGKTEGSMDAGNLIKPMLARGELNCIGATTFDEYRKYIEKDKALERRFQPVIIDEPTVEDTISIIRGLKERFEIHHGIRIHDSAIVAAAKLSQRYITDRYLPDKAIDLIDEAGAMIRTEIDSLPTELDSIKRK 422          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_RICFE (Chaperone protein clpB OS=Rickettsia felis GN=clpB PE=3 SV=2)

HSP 1 Score: 342.428 bits (877), Expect = 1.422e-93
Identity = 164/239 (68.62%), Postives = 203/239 (84.94%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  V++LSRR KNNP LIGEPGVGKTA++EGLAQRI   DVP +L + R+I LDMGAL+AGAKYRGEFEERLKAVL E++E+ G++ILFIDE+HL++G G+T+G+MDA+NL KPMLARG+L CIGATTL+EYRKY+EKDAA  RRFQ VYV+EP+  DT+SILRG+KEKYE HH VRI D A+V AA LS RYIT R+LPDKAIDL+DEAC+ +++ L S PEE+D L+R+ + +K
Sbjct:  186 EEIRRTVQVLSRRMKNNPVLIGEPGVGKTAIIEGLAQRIFSKDVPESLMNCRIIELDMGALIAGAKYRGEFEERLKAVLGEIKESSGEIILFIDELHLLVGTGKTDGAMDASNLLKPMLARGELHCIGATTLDEYRKYIEKDAALARRFQPVYVSEPTASDTISILRGIKEKYELHHAVRISDSAIVAAATLSNRYITDRYLPDKAIDLIDEACSRMKIELSSKPEELDELDRRIIQIK 424          
The following BLAST results are available for this feature:
BLAST of CB610803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
CLPB_CLOAB4.422e-9573.08Chaperone protein clpB OS=Clostridium acetobutylic... [more]
HSP98_NEUCR5.775e-9573.75Heat shock protein hsp98 OS=Neurospora crassa GN=h... [more]
CLPB_GLOVI1.286e-9471.55Chaperone protein clpB OS=Gloeobacter violaceus GN... [more]
CLPB_RICCN2.866e-9469.04Chaperone protein clpB OS=Rickettsia conorii GN=cl... [more]
CLPB_RICBR2.866e-9469.46Chaperone protein clpB OS=Rickettsia bellii (strai... [more]
CLPB_BRUME2.866e-9471.13Chaperone protein clpB OS=Brucella melitensis GN=c... [more]
CLPB_BRUSU3.743e-9471.13Chaperone protein clpB OS=Brucella suis GN=clpB PE... [more]
CLPB2_SYNY33.743e-9471.13Chaperone protein clpB 2 OS=Synechocystis sp. (str... [more]
CLPB_CLOTE6.385e-9470.94Chaperone protein clpB OS=Clostridium tetani GN=cl... [more]
CLPB_RICFE1.422e-9368.62Chaperone protein clpB OS=Rickettsia felis GN=clpB... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0002_IVaF_D06 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IVaF_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610803 ID=CB610803; Name=CB610803; organism=Citrus sinensis; type=EST; length=721bp
GGGGAAGAAATTAGAACGTTTGTTCGAATTCTGTCAAGGAGGACTAAAAA
CAATCCTGCTCTTATTGGAGAGCCAGGAGTTGGTAAAACCGCTGTGGTGG
AAGGATTGGCTCAGAGAATTGTGCGAGGAGATGTGCCTAGCAACCTTGCT
GATGTGAGGCTCATTGCTTTGGATATGGGTGCTCTGGTTGCAGGCGCCAA
GTATAGGGGAGAGTTTGAAGAGAGGTTGAAGGCTGTTCTGAAAGAAGTAG
AAGAAGCTGAGGGAAAAGTGATTTTGTTTATTGATGAGATTCACCTTGTC
CTTGGAGCTGGTCGAACCGAGGGATCAATGGATGCTGCTAACCTCTTTAA
GCCTATGCTTGCAAGAGGCCAGCTTAGATGTATTGGTGCTACCACGCTCG
AGGAGTATAGAAAGTATGTGGAGAAAGACGCTGCATTTGAGAGAAGGTTC
CAACAAGTATATGTGGCTGAACCTAGCGTTCCTGATACAGTTAGCATTCT
TCGTGGATTGAAGGAGAAGTATGAGGGTCATCATGGTGTTCGGATTCAGG
ATCGTGCTCTTGTTGTTGCGGCACAACTATCAGCACGATATATAACAGGA
CGTCATCTCCCAGACAAGGCAATTGATTTGGTTGATGAAGCTTGCGCAAA
TGTGAGGGTNNAGCTTGATAGTCACCCAGAGGAAATTGATAATCTAGAGA
GGAAGAAAATGCCATTAAAGN
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