CB610803

Overview
NameCB610803
Unique NameCB610803
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_PROFR (Chaperone protein clpB (Fragment) OS=Propionibacterium freudenreichii subsp. shermanii GN=clpB PE=2 SV=1)

HSP 1 Score: 338.191 bits (866), Expect = 2.682e-92
Identity = 167/233 (71.67%), Postives = 199/233 (85.41%), Query Frame = 1
Query:    7 EIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERK 705
            EIR   ++LSRRTKNNP LIGE GVGKTAVVEGLAQRIV+GDVP +L   RL++LD+ ++VAGAKYRGEFEERLKAVL E++ AEG++I FIDE+H V+GAG +EGSMDA+N+ KP+LARG+LR IGATTL+EYR+++EKD A ERRFQQVYV EPSV DTV+ILRGL+E+YE HH VRI D ALV AAQLS RYITGR LPDKAIDLVDEA + +R+ +DS PEEID L R+
Sbjct:  187 EIRRVAQVLSRRTKNNPVLIGEAGVGKTAVVEGLAQRIVKGDVPDSLKGRRLVSLDLASMVAGAKYRGEFEERLKAVLNEIKSAEGQIITFIDELHTVVGAGASEGSMDASNMLKPLLARGELRLIGATTLDEYREHIEKDPALERRFQQVYVGEPSVEDTVAILRGLRERYEAHHKVRITDSALVAAAQLSHRYITGRQLPDKAIDLVDEAASRLRMEIDSSPEEIDTLRRQ 419          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_LACLA (Chaperone protein clpB OS=Lactococcus lactis subsp. lactis GN=clpB PE=3 SV=1)

HSP 1 Score: 338.191 bits (866), Expect = 2.682e-92
Identity = 168/239 (70.29%), Postives = 199/239 (83.26%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  +R+LSR+TKNNP LIGEPGVGKTA+VEGLAQRIVR DVP NL D  + +LDMGAL+AGAKYRGEFEERLKAVL EV++++G++ILFIDE+H ++GAG+TEGSMDA NL KPMLARG+L  IGATTL+EYRKY+E D A ERRFQ+V V EP+V DT+SILRGLKE++E HHGV I D ALV AA LS RYIT R LPDKAIDLVDEA A +RV ++S P E+D   R+ M L+
Sbjct:  187 EEIRDVIRVLSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPENLKDKTIFSLDMGALIAGAKYRGEFEERLKAVLNEVKKSDGQIILFIDELHTIVGAGKTEGSMDAGNLLKPMLARGELHLIGATTLDEYRKYMETDKALERRFQKVLVTEPTVEDTISILRGLKERFEIHHGVTIHDNALVAAATLSNRYITDRFLPDKAIDLVDEASATIRVEMNSLPTELDQANRRLMQLE 425          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_COXBU (Chaperone protein clpB OS=Coxiella burnetii GN=clpB PE=3 SV=1)

HSP 1 Score: 338.191 bits (866), Expect = 2.682e-92
Identity = 163/239 (68.20%), Postives = 199/239 (83.26%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  V++L RRTKNNP LIGEPGVGKTA+VEGLAQRIV G+VP  L   RL+ALDMGAL+AGAK+RGEFEERLKAVLK++ + EG+VILFIDE+H ++GAG+ EG+MDA N+ KP LARG+L C+GATTL+EYRKY+EKDAA ERRFQ+V V EPS  D ++ILRGLKE+YE HHGV I D A++ AA LS RYIT R+LPDKAIDL+DEA + +R+ +DS P E+D LER+ + LK
Sbjct:  185 EEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKQKRLLALDMGALIAGAKFRGEFEERLKAVLKDIAKEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKVLVEEPSTEDAIAILRGLKERYEVHHGVEITDPAIIAAATLSQRYITDRNLPDKAIDLIDEAASQIRMEMDSKPVELDRLERRLIQLK 423          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_PSEAE (Chaperone protein clpB OS=Pseudomonas aeruginosa GN=clpB PE=3 SV=1)

HSP 1 Score: 337.035 bits (863), Expect = 5.976e-92
Identity = 161/239 (67.36%), Postives = 201/239 (84.10%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            +EIR  +++L RRTKNNP LIGEPGVGKTA+VEGLAQRI+ G+VP  L D RL+ALDMGAL+AGAK+RGEFEERLKAVL E+ + EG+VILFIDE+H ++GAG+ EG+MDA N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V V EPS  DT++ILRGLKE+YE HHGV I D A++ AA+LS RYIT R LPDKAIDL+DEA + +R+ +DS PEE+D L+R+ + LK
Sbjct:  185 DEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERLKAVLNELGKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVSITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLK 423          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_RICTY (Chaperone protein clpB OS=Rickettsia typhi GN=clpB PE=3 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 7.805e-92
Identity = 161/239 (67.36%), Postives = 200/239 (83.68%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  V++LSRR KNNP LIG PGVGKTA++EGLAQRI   DVP  L + R+I LD+GAL+AGA+YRGEFE+RLK+VL E++E+ G++ILFIDE+HL++G G+ EG+MDA+NL KPMLARG+L CIGATTL+EYRKY+EKDAA  RRFQ VYV EPSV DT+SILRG+KEKYE HH VRI D A+V AA LS RYIT R+LPDKAIDL+DEAC+ +++ L S PEE+D L+R+ + +K
Sbjct:  186 EEIRRAVQVLSRRMKNNPVLIGAPGVGKTAIIEGLAQRIFNKDVPETLINCRIIELDIGALIAGAQYRGEFEKRLKSVLSEIKESSGEIILFIDELHLLVGTGKVEGAMDASNLLKPMLARGELHCIGATTLDEYRKYIEKDAALARRFQPVYVGEPSVEDTISILRGIKEKYELHHAVRISDSAIVAAATLSNRYITDRYLPDKAIDLIDEACSRMKIELSSKPEELDELDRRIIQIK 424          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: HS104_SCHPO (Heat shock protein 104 OS=Schizosaccharomyces pombe GN=hsp104 PE=2 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 1.019e-91
Identity = 166/240 (69.17%), Postives = 203/240 (84.58%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            +EIR  +R+LSRRTKNNP LIGEPGVGKT++ EGLA+RI+  DVP+NL++ +L++LD+G+LVAG+K+RGEFEER+K+VLKEVEE+E  +ILF+DE+HL++GAG   EG MDAANL KPMLARG+L CIGATTL EY+KY+EKDAAFERRFQ + V EPS+ DT+SILRGLKEKYE HHGV I DRALV AA L++RY+T R LPD AIDLVDEA A VRV  +S PE +DNLERK   L+
Sbjct:  188 DEIRRTIRVLSRRTKNNPVLIGEPGVGKTSIAEGLARRIIDDDVPANLSNCKLLSLDVGSLVAGSKFRGEFEERIKSVLKEVEESETPIILFVDEMHLLMGAGSGGEGGMDAANLLKPMLARGKLHCIGATTLAEYKKYIEKDAAFERRFQIILVKEPSIEDTISILRGLKEKYEVHHGVTISDRALVTAAHLASRYLTSRRLPDSAIDLVDEAAAAVRVTRESQPEVLDNLERKLRQLR 427          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_RICPR (Chaperone protein clpB OS=Rickettsia prowazekii GN=clpB PE=3 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 1.019e-91
Identity = 161/239 (67.36%), Postives = 200/239 (83.68%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  V++LSRR KNNP LIG PGVGKTA++EGLAQRI   DVP  L + R+I LD+GAL+AGA+YRGEFE+RLKAVL E++E+ G++ILFIDE+HL++G G+ +G+MDA+NL KPMLARG+L CIGATTL+EYRKY+EKDAA  RRFQ VYV EPSV DT+SILRG+KEKYE HH VRI D A+V AA LS RYIT R+LPDKAIDL+DEAC+ +++ L S PEE+D L+R+ + +K
Sbjct:  186 EEIRRAVQVLSRRMKNNPVLIGAPGVGKTAIIEGLAQRIFSKDVPETLINCRIIELDIGALIAGAQYRGEFEKRLKAVLSEIKESSGEIILFIDELHLLVGTGKVDGAMDASNLLKPMLARGELHCIGATTLDEYRKYIEKDAALARRFQPVYVGEPSVEDTISILRGIKEKYELHHAVRISDSAIVAAATLSNRYITDRYLPDKAIDLIDEACSRMKIELSSKPEELDELDRRIIQIK 424          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_HAEIN (Chaperone protein clpB OS=Haemophilus influenzae GN=clpB PE=3 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.331e-91
Identity = 163/239 (68.20%), Postives = 202/239 (84.52%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  +++L RRTKNNP LIGEPGVGKTA+VEGLAQRIV G+VP  L + R+++LDMGAL+AGAKYRGEFEERLKAVL E+ + EG+VILFIDEIH ++GAG+T+G+MDA NL KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+V EPSV DT++ILRGLKE+YE HH V I D A+V AA LS RYI+ R LPDKAIDL+DEA +++R+ +DS PE +D LER+ + LK
Sbjct:  185 EEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLK 423          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_BIFLO (Chaperone protein clpB OS=Bifidobacterium longum GN=clpB PE=3 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.331e-91
Identity = 166/234 (70.94%), Postives = 199/234 (85.04%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERK 705
            +EIR  ++ILSRRTKNNP LIGEPGVGKTAVVEGLAQRIV GDVP+ L   +LI+LD+G++VAG+KYRGEFEERLK+VL E++ A+G++I FIDEIH ++GAG  EGSMDA N+ KPMLARG+LR IGATTL+EYR+ +EKD A ERRFQQV+V EPSV DT++ILRGLK++YE HH V I D ALV AA LS RYI+GR LPDKAIDLVDEA A++R+ LDS PEEID L+RK
Sbjct:  186 QEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQGKKLISLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQIITFIDEIHTIVGAGAAEGSMDAGNMLKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTIAILRGLKQRYEAHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSSPEEIDELQRK 419          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_XYLFT (Chaperone protein clpB OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=clpB PE=3 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 1.739e-91
Identity = 162/239 (67.78%), Postives = 199/239 (83.26%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  +++L RRTKNNP LIGEPGVGKTA+VEGLAQRIV G+VP  L   RL++LD+GAL+AGAK+RGEFEERLK VL ++ + EG+VILFIDE+H ++GAG+ EG+MDA N+ KP LARG+L CIGATTL+EYRKY+EKDAA ERRFQ+V+V EP+V DT++ILRGLKEKY  HHGV I D A+V AA LS RYIT R LPDKAIDL+DEA + +R+ +DS PEE+D LER+ + LK
Sbjct:  185 EEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLRSKRLLSLDLGALIAGAKFRGEFEERLKGVLNDLAKNEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKEKYALHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLK 423          
The following BLAST results are available for this feature:
BLAST of CB610803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
CLPB_PROFR2.682e-9271.67Chaperone protein clpB (Fragment) OS=Propionibacte... [more]
CLPB_LACLA2.682e-9270.29Chaperone protein clpB OS=Lactococcus lactis subsp... [more]
CLPB_COXBU2.682e-9268.20Chaperone protein clpB OS=Coxiella burnetii GN=clp... [more]
CLPB_PSEAE5.976e-9267.36Chaperone protein clpB OS=Pseudomonas aeruginosa G... [more]
CLPB_RICTY7.805e-9267.36Chaperone protein clpB OS=Rickettsia typhi GN=clpB... [more]
HS104_SCHPO1.019e-9169.17Heat shock protein 104 OS=Schizosaccharomyces pomb... [more]
CLPB_RICPR1.019e-9167.36Chaperone protein clpB OS=Rickettsia prowazekii GN... [more]
CLPB_HAEIN1.331e-9168.20Chaperone protein clpB OS=Haemophilus influenzae G... [more]
CLPB_BIFLO1.331e-9170.94Chaperone protein clpB OS=Bifidobacterium longum G... [more]
CLPB_XYLFT1.739e-9167.78Chaperone protein clpB OS=Xylella fastidiosa (stra... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0002_IVaF_D06 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IVaF_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610803 ID=CB610803; Name=CB610803; organism=Citrus sinensis; type=EST; length=721bp
GGGGAAGAAATTAGAACGTTTGTTCGAATTCTGTCAAGGAGGACTAAAAA
CAATCCTGCTCTTATTGGAGAGCCAGGAGTTGGTAAAACCGCTGTGGTGG
AAGGATTGGCTCAGAGAATTGTGCGAGGAGATGTGCCTAGCAACCTTGCT
GATGTGAGGCTCATTGCTTTGGATATGGGTGCTCTGGTTGCAGGCGCCAA
GTATAGGGGAGAGTTTGAAGAGAGGTTGAAGGCTGTTCTGAAAGAAGTAG
AAGAAGCTGAGGGAAAAGTGATTTTGTTTATTGATGAGATTCACCTTGTC
CTTGGAGCTGGTCGAACCGAGGGATCAATGGATGCTGCTAACCTCTTTAA
GCCTATGCTTGCAAGAGGCCAGCTTAGATGTATTGGTGCTACCACGCTCG
AGGAGTATAGAAAGTATGTGGAGAAAGACGCTGCATTTGAGAGAAGGTTC
CAACAAGTATATGTGGCTGAACCTAGCGTTCCTGATACAGTTAGCATTCT
TCGTGGATTGAAGGAGAAGTATGAGGGTCATCATGGTGTTCGGATTCAGG
ATCGTGCTCTTGTTGTTGCGGCACAACTATCAGCACGATATATAACAGGA
CGTCATCTCCCAGACAAGGCAATTGATTTGGTTGATGAAGCTTGCGCAAA
TGTGAGGGTNNAGCTTGATAGTCACCCAGAGGAAATTGATAATCTAGAGA
GGAAGAAAATGCCATTAAAGN
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