CB610803

Overview
NameCB610803
Unique NameCB610803
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_PASMU (Chaperone protein clpB OS=Pasteurella multocida GN=clpB PE=3 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 2.271e-91
Identity = 160/239 (66.95%), Postives = 203/239 (84.94%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  +++L RRTKNNP LIGEPGVGKTA+VEGLAQRIV G+VP  L + R+++LDMGAL+AGAKYRGEFEERLKAVL E+ + EG+VILFIDEIH ++GAG+T+G+MDA NL KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+V EP+V DT++ILRGLKE+YE HH V+I D A+V AA LS RY++ R LPDKAIDL+DEA +++R+ +DS P+ +D LER+ + LK
Sbjct:  184 EEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYVSDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLERRIIQLK 422          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_DESVH (Chaperone protein clpB OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=clpB PE=3 SV=1)

HSP 1 Score: 334.724 bits (857), Expect = 2.966e-91
Identity = 164/238 (68.91%), Postives = 197/238 (82.77%), Query Frame = 1
Query:    7 EIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EIR  +RILSRRTKNNP LIGE GVGKTA+VEGLA RI++GDVP  L +  L ALDMGAL+AGAKYRGEFEERLKAVLKEVE++EG++I+FIDE+H ++GAG+T+G+MDA+NL KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQ V V EP++ D +SILRGLKE++E HHGVRI D A+V A  LS RYIT R LPDKAIDL+DEA A +R  +DS P ++D   RK M L+
Sbjct:  191 EIRRVIRILSRRTKNNPVLIGEAGVGKTAIVEGLAHRILKGDVPEGLKERGLFALDMGALIAGAKYRGEFEERLKAVLKEVEKSEGRIIMFIDELHTIVGAGKTDGAMDASNLLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQPVLVDEPTIEDAISILRGLKERFEVHHGVRISDSAIVEAVTLSHRYITDRQLPDKAIDLIDEAAALIRTEIDSLPADLDEANRKIMQLE 428          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_BACCR (Chaperone protein clpB OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=clpB PE=3 SV=1)

HSP 1 Score: 334.724 bits (857), Expect = 2.966e-91
Identity = 162/238 (68.07%), Postives = 199/238 (83.61%), Query Frame = 1
Query:    7 EIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EIR  +RILSR+TKNNP LIGEPGVGKTA+VEGLAQRIV+ DVP  L D  + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV   EP+V DT+SILRGLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R  +DS P E+D + R+ M L+
Sbjct:  189 EIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTELDEVTRRIMQLE 426          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_BACC1 (Chaperone protein clpB OS=Bacillus cereus (strain ATCC 10987) GN=clpB PE=3 SV=1)

HSP 1 Score: 334.724 bits (857), Expect = 2.966e-91
Identity = 162/238 (68.07%), Postives = 199/238 (83.61%), Query Frame = 1
Query:    7 EIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EIR  +RILSR+TKNNP LIGEPGVGKTA+VEGLAQRIV+ DVP  L D  + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV   EP+V DT+SILRGLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R  +DS P E+D + R+ M L+
Sbjct:  189 EIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTELDEVTRRIMQLE 426          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_BACAN (Chaperone protein clpB OS=Bacillus anthracis GN=clpB PE=3 SV=1)

HSP 1 Score: 334.724 bits (857), Expect = 2.966e-91
Identity = 162/238 (68.07%), Postives = 199/238 (83.61%), Query Frame = 1
Query:    7 EIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EIR  +RILSR+TKNNP LIGEPGVGKTA+VEGLAQRIV+ DVP  L D  + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV   EP+V DT+SILRGLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R  +DS P E+D + R+ M L+
Sbjct:  189 EIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTELDEVTRRIMQLE 426          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_XYLFA (Chaperone protein clpB OS=Xylella fastidiosa GN=clpB PE=3 SV=1)

HSP 1 Score: 334.339 bits (856), Expect = 3.873e-91
Identity = 161/239 (67.36%), Postives = 199/239 (83.26%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  +++L RRTKNNP LIGEPGVGKTA+VEGLAQRIV G+VP  L   RL++LD+GAL+AGAK+RGEFEERLK VL ++ + EG+VILFIDE+H ++GAG+ +G+MDA N+ KP LARG+L CIGATTL+EYRKY+EKDAA ERRFQ+V+V EP+V DT++ILRGLKEKY  HHGV I D A+V AA LS RYIT R LPDKAIDL+DEA + +R+ +DS PEE+D LER+ + LK
Sbjct:  185 EEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLRSKRLLSLDLGALIAGAKFRGEFEERLKGVLNDLAKNEGRVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKEKYALHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLK 423          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_HAEDU (Chaperone protein clpB OS=Haemophilus ducreyi GN=clpB PE=3 SV=1)

HSP 1 Score: 334.339 bits (856), Expect = 3.873e-91
Identity = 164/239 (68.62%), Postives = 202/239 (84.52%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  V++L RRTKNNP LIGEPGVGKTA+VEGLAQRIV G+VP  L + R+++LDMGAL+AGAKYRGEFEERLKAVL E+ + EG+VILFIDEIH ++GAG+T+G+MDA NL KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V V EPSV DT++ILRGLKE+YE HH V+I D A+V AA LS RYI+ R LPDKAIDL+DEA +++R+ +DS PE +D LER+ + LK
Sbjct:  183 EEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLK 421          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_CORDI (Chaperone protein clpB OS=Corynebacterium diphtheriae GN=clpB PE=3 SV=1)

HSP 1 Score: 334.339 bits (856), Expect = 3.873e-91
Identity = 166/234 (70.94%), Postives = 198/234 (84.62%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLER 702
            +EIR  V++LSRRTKNNP LIGEPGVGKTA+VEGLA+RIV GDVP +L    LI+LD+G++VAGAKYRGEFEERLKAVL E++ AEG++I FIDE+H ++GAG T + +MDA N+ KP+LARG+LR +GATTL+EYRKY+EKDAA ERRFQQV+V EPSV D V ILRGLKE+YE HHGVRIQD ALV AA LS RYIT R LPDKAIDLVDEA + +R+ +DS P+EID LER
Sbjct:  186 QEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLKGKTLISLDLGSMVAGAKYRGEFEERLKAVLDEIKSAEGEIITFIDELHTIVGAGATGDSAMDAGNMIKPLLARGELRLVGATTLDEYRKYIEKDAALERRFQQVFVGEPSVEDAVGILRGLKERYEVHHGVRIQDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELER 419          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_XANCP (Chaperone protein clpB OS=Xanthomonas campestris pv. campestris GN=clpB PE=3 SV=1)

HSP 1 Score: 333.954 bits (855), Expect = 5.059e-91
Identity = 159/239 (66.53%), Postives = 200/239 (83.68%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  +++L RRTKNNP LIGEPGVGKTA+VEGLAQRI+ G+VP  L   R+++LDMGAL+AGAK+RGEFEERLKAVL ++ + EG++ILFIDE+H ++GAG+ +G+MDA N+ KP LARG+L CIGATTL+EYRKY+EKDAA ERRFQ+V+V EP+V DT++ILRGLKE+Y  HHGV I D A+V AA LS RYIT R LPDKAIDL+DEA + +R+ +DS PEE+D LER+ + LK
Sbjct:  185 EEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLSDLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLK 423          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_XANAC (Chaperone protein clpB OS=Xanthomonas axonopodis pv. citri GN=clpB PE=3 SV=2)

HSP 1 Score: 333.954 bits (855), Expect = 5.059e-91
Identity = 159/239 (66.53%), Postives = 200/239 (83.68%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  +++L RRTKNNP LIGEPGVGKTA+VEGLAQRI+ G+VP  L   R+++LDMGAL+AGAK+RGEFEERLKAVL ++ + EG++ILFIDE+H ++GAG+ +G+MDA N+ KP LARG+L CIGATTL+EYRKY+EKDAA ERRFQ+V+V EP+V DT++ILRGLKE+Y  HHGV I D A+V AA LS RYIT R LPDKAIDL+DEA + +R+ +DS PEE+D LER+ + LK
Sbjct:  185 EEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLSDLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLK 423          
The following BLAST results are available for this feature:
BLAST of CB610803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
CLPB_PASMU2.271e-9166.95Chaperone protein clpB OS=Pasteurella multocida GN... [more]
CLPB_DESVH2.966e-9168.91Chaperone protein clpB OS=Desulfovibrio vulgaris (... [more]
CLPB_BACCR2.966e-9168.07Chaperone protein clpB OS=Bacillus cereus (strain ... [more]
CLPB_BACC12.966e-9168.07Chaperone protein clpB OS=Bacillus cereus (strain ... [more]
CLPB_BACAN2.966e-9168.07Chaperone protein clpB OS=Bacillus anthracis GN=cl... [more]
CLPB_XYLFA3.873e-9167.36Chaperone protein clpB OS=Xylella fastidiosa GN=cl... [more]
CLPB_HAEDU3.873e-9168.62Chaperone protein clpB OS=Haemophilus ducreyi GN=c... [more]
CLPB_CORDI3.873e-9170.94Chaperone protein clpB OS=Corynebacterium diphther... [more]
CLPB_XANCP5.059e-9166.53Chaperone protein clpB OS=Xanthomonas campestris p... [more]
CLPB_XANAC5.059e-9166.53Chaperone protein clpB OS=Xanthomonas axonopodis p... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0002_IVaF_D06 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IVaF_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610803 ID=CB610803; Name=CB610803; organism=Citrus sinensis; type=EST; length=721bp
GGGGAAGAAATTAGAACGTTTGTTCGAATTCTGTCAAGGAGGACTAAAAA
CAATCCTGCTCTTATTGGAGAGCCAGGAGTTGGTAAAACCGCTGTGGTGG
AAGGATTGGCTCAGAGAATTGTGCGAGGAGATGTGCCTAGCAACCTTGCT
GATGTGAGGCTCATTGCTTTGGATATGGGTGCTCTGGTTGCAGGCGCCAA
GTATAGGGGAGAGTTTGAAGAGAGGTTGAAGGCTGTTCTGAAAGAAGTAG
AAGAAGCTGAGGGAAAAGTGATTTTGTTTATTGATGAGATTCACCTTGTC
CTTGGAGCTGGTCGAACCGAGGGATCAATGGATGCTGCTAACCTCTTTAA
GCCTATGCTTGCAAGAGGCCAGCTTAGATGTATTGGTGCTACCACGCTCG
AGGAGTATAGAAAGTATGTGGAGAAAGACGCTGCATTTGAGAGAAGGTTC
CAACAAGTATATGTGGCTGAACCTAGCGTTCCTGATACAGTTAGCATTCT
TCGTGGATTGAAGGAGAAGTATGAGGGTCATCATGGTGTTCGGATTCAGG
ATCGTGCTCTTGTTGTTGCGGCACAACTATCAGCACGATATATAACAGGA
CGTCATCTCCCAGACAAGGCAATTGATTTGGTTGATGAAGCTTGCGCAAA
TGTGAGGGTNNAGCTTGATAGTCACCCAGAGGAAATTGATAATCTAGAGA
GGAAGAAAATGCCATTAAAGN
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