CB610803

Overview
NameCB610803
Unique NameCB610803
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_BRAJA (Chaperone protein clpB OS=Bradyrhizobium japonicum GN=clpB PE=3 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 6.607e-91
Identity = 163/239 (68.20%), Postives = 203/239 (84.94%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  +++LSRRTKNNP LIGEPGVGKTA+ EGLA RIV GDVP +L D +L++LD+GAL+AGAKYRGEFEERLKAVL+EV  +EG  ILFIDE+H ++GAG+ +G+MDA+NL KP LARG+L CIGATTL+EY+K+VEKDAA  RRFQ ++V+EPSV DT+SILRGLK+KYE HHGVRI D ALV +A LS RYIT R LPDKAIDL+DEA A +++ +DS PEE+D+++R+ + LK
Sbjct:  187 EEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDKKLLSLDLGALIAGAKYRGEFEERLKAVLQEVTGSEGTFILFIDEMHTLIGAGKGDGAMDASNLLKPALARGELHCIGATTLDEYQKHVEKDAALARRFQPIFVSEPSVEDTISILRGLKDKYEQHHGVRITDSALVASATLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDSMDREIIRLK 425          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_BDEBA (Chaperone protein clpB OS=Bdellovibrio bacteriovorus GN=clpB PE=3 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 6.607e-91
Identity = 163/239 (68.20%), Postives = 198/239 (82.85%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  V++LSRRTKNNP LIGEPGVGKTA+ EGLA RI++ DVP NL   +L++LDMGAL+AGAKYRGEFE+RLKAV+KEV  ++G++ILFIDE+H ++GAG+TEG+MDA  L KP LARG+LRCIGATTL+EYRKY+EKDAA ERRFQ V V EPSV D ++ILRGLKEKYE HHG+RI D ALV A +LS RYIT R LPDKAIDL+DEA + + +   S PEE+D +ER+ M L+
Sbjct:  181 EEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIIKQDVPDNLIGKKLMSLDMGALIAGAKYRGEFEDRLKAVIKEVTSSDGQIILFIDELHTLVGAGKTEGAMDAGQLLKPALARGELRCIGATTLDEYRKYIEKDAALERRFQTVMVEEPSVEDAITILRGLKEKYEVHHGIRITDAALVSAVKLSHRYITNRFLPDKAIDLIDEAASKLGIETRSVPEEVDKIERELMQLR 419          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_TREPA (Chaperone protein clpB OS=Treponema pallidum GN=clpB PE=3 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 8.629e-91
Identity = 164/238 (68.91%), Postives = 202/238 (84.87%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPL 717
            EEIR  +++LSRRTKNNP LIGEPGVGKTA+VEGLA+RIV GDVP +L   RL++LD+GALVAGAK+RGEFEERLKAV++ V++++G VILFIDE+H ++GAG +EGSMDA+NL KP LARG+LR IGATTL EYRKY+EKDAA ERRFQQVY  +P+V DT++ILRGL+EKYE HHGVRI+D ALV A  LS RYIT R LPDKAIDLVDEA + +++ ++S P E+D +ERK + L
Sbjct:  185 EEIRRVMQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVSGDVPESLKGKRLLSLDLGALVAGAKFRGEFEERLKAVIEAVQKSDGGVILFIDELHTLVGAGASEGSMDASNLLKPALARGELRSIGATTLNEYRKYIEKDAALERRFQQVYCVQPTVEDTIAILRGLQEKYEVHHGVRIKDEALVAATVLSDRYITNRFLPDKAIDLVDEAASRLKMEIESQPVELDQVERKILQL 422          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_RHIME (Chaperone protein clpB OS=Rhizobium meliloti GN=clpB PE=3 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 8.629e-91
Identity = 165/239 (69.04%), Postives = 198/239 (82.85%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            +EIR  +++LSRRTKNNP LIGEPGVGKTA+ EGLA RIV GDVP +L D RL+ALDMGAL+AGAK+RGEFEERLKAVL EV    G++ILFIDE+H ++GAG+ +G+MDA+NL KP LARG+L C+GATTL+EYRK+VEKDAA  RRFQ V V EP+V DT+SILRGLKEKYE HH VRI D ALV AA LS RYIT R LPDKAIDL+DEA + +R+ +DS PEE+D L+R+ + LK
Sbjct:  186 DEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDKRLMALDMGALIAGAKFRGEFEERLKAVLNEVRSEGGEIILFIDEMHTLVGAGKADGAMDASNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVMVEEPTVEDTISILRGLKEKYEQHHKVRISDSALVAAAALSNRYITDRFLPDKAIDLMDEAASRLRMQVDSKPEELDELDRRVIQLK 424          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_COREF (Chaperone protein clpB OS=Corynebacterium efficiens GN=clpB PE=3 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 8.629e-91
Identity = 165/234 (70.51%), Postives = 197/234 (84.19%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLER 702
            +EIR  V++LSRRTKNNP LIGEPGVGKTA+VEGLA+RIV GDVP +L    LI+LD+G++VAGAKYRGEFEERLKAVL E++ A G+++ FIDE+H ++GAG + E +MDA N+ KP+LARG+LR +GATTL EYRKY+EKD A ERRFQQVYV EPSV DTV ILRGLKE+YE HHGVRIQD ALV AA+LS RYIT R LPDKAIDLVDEA + +R+ +DS P+EID LER
Sbjct:  186 QEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLKGKTLISLDLGSMVAGAKYRGEFEERLKAVLDEIKGANGEIVTFIDELHTIVGAGASGESAMDAGNMIKPLLARGELRLVGATTLNEYRKYIEKDTALERRFQQVYVGEPSVEDTVGILRGLKERYEVHHGVRIQDSALVAAAELSHRYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELER 419          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_SHIFL (Chaperone protein clpB OS=Shigella flexneri GN=clpB PE=3 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.127e-90
Identity = 160/239 (66.95%), Postives = 200/239 (83.68%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  +++L RRTKNNP LIGEPGVGKTA+VEGLAQRI+ G+VP  L   R++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+YE HH V+I D A+V AA LS RYI  R LPDKAIDL+DEA +++R+ +DS PEE+D L+R+ + LK
Sbjct:  185 EEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLK 423          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_SALTY (Chaperone protein clpB OS=Salmonella typhimurium GN=clpB PE=3 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.127e-90
Identity = 160/239 (66.95%), Postives = 200/239 (83.68%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  +++L RRTKNNP LIGEPGVGKTA+VEGLAQRI+ G+VP  L   R++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+YE HH V+I D A+V AA LS RYI  R LPDKAIDL+DEA +++R+ +DS PEE+D L+R+ + LK
Sbjct:  185 EEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLK 423          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_SALTI (Chaperone protein clpB OS=Salmonella typhi GN=clpB PE=3 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.127e-90
Identity = 160/239 (66.95%), Postives = 200/239 (83.68%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  +++L RRTKNNP LIGEPGVGKTA+VEGLAQRI+ G+VP  L   R++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+YE HH V+I D A+V AA LS RYI  R LPDKAIDL+DEA +++R+ +DS PEE+D L+R+ + LK
Sbjct:  185 EEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLK 423          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_MYCPA (Chaperone protein clpB OS=Mycobacterium paratuberculosis GN=clpB PE=3 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.127e-90
Identity = 165/233 (70.82%), Postives = 197/233 (84.55%), Query Frame = 1
Query:    7 EIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLER 702
            EIR  V++LSRRTKNNP LIGEPGVGKTA+VEGLAQRIV GDVP +L D  +IALD+G++VAGAKYRGEFEERLKAVL +++ + G++I FIDE+H ++GAG T EG+MDA N+ KPMLARG+LR +GATTL+EYRKY+EKDAA ERRFQQV+V EPSV DTV ILRGLK++YE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +++ +DS P EID +ER
Sbjct:  186 EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTVIALDLGSMVAGAKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMIKPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVFVGEPSVEDTVGILRGLKDRYEVHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLKMEIDSRPVEIDEVER 418          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_ECOLI (Chaperone protein clpB OS=Escherichia coli (strain K12) GN=clpB PE=1 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.127e-90
Identity = 160/239 (66.95%), Postives = 200/239 (83.68%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  +++L RRTKNNP LIGEPGVGKTA+VEGLAQRI+ G+VP  L   R++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+YE HH V+I D A+V AA LS RYI  R LPDKAIDL+DEA +++R+ +DS PEE+D L+R+ + LK
Sbjct:  185 EEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLK 423          
The following BLAST results are available for this feature:
BLAST of CB610803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
CLPB_BRAJA6.607e-9168.20Chaperone protein clpB OS=Bradyrhizobium japonicum... [more]
CLPB_BDEBA6.607e-9168.20Chaperone protein clpB OS=Bdellovibrio bacteriovor... [more]
CLPB_TREPA8.629e-9168.91Chaperone protein clpB OS=Treponema pallidum GN=cl... [more]
CLPB_RHIME8.629e-9169.04Chaperone protein clpB OS=Rhizobium meliloti GN=cl... [more]
CLPB_COREF8.629e-9170.51Chaperone protein clpB OS=Corynebacterium efficien... [more]
CLPB_SHIFL1.127e-9066.95Chaperone protein clpB OS=Shigella flexneri GN=clp... [more]
CLPB_SALTY1.127e-9066.95Chaperone protein clpB OS=Salmonella typhimurium G... [more]
CLPB_SALTI1.127e-9066.95Chaperone protein clpB OS=Salmonella typhi GN=clpB... [more]
CLPB_MYCPA1.127e-9070.82Chaperone protein clpB OS=Mycobacterium paratuberc... [more]
CLPB_ECOLI1.127e-9066.95Chaperone protein clpB OS=Escherichia coli (strain... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0002_IVaF_D06 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IVaF_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610803 ID=CB610803; Name=CB610803; organism=Citrus sinensis; type=EST; length=721bp
GGGGAAGAAATTAGAACGTTTGTTCGAATTCTGTCAAGGAGGACTAAAAA
CAATCCTGCTCTTATTGGAGAGCCAGGAGTTGGTAAAACCGCTGTGGTGG
AAGGATTGGCTCAGAGAATTGTGCGAGGAGATGTGCCTAGCAACCTTGCT
GATGTGAGGCTCATTGCTTTGGATATGGGTGCTCTGGTTGCAGGCGCCAA
GTATAGGGGAGAGTTTGAAGAGAGGTTGAAGGCTGTTCTGAAAGAAGTAG
AAGAAGCTGAGGGAAAAGTGATTTTGTTTATTGATGAGATTCACCTTGTC
CTTGGAGCTGGTCGAACCGAGGGATCAATGGATGCTGCTAACCTCTTTAA
GCCTATGCTTGCAAGAGGCCAGCTTAGATGTATTGGTGCTACCACGCTCG
AGGAGTATAGAAAGTATGTGGAGAAAGACGCTGCATTTGAGAGAAGGTTC
CAACAAGTATATGTGGCTGAACCTAGCGTTCCTGATACAGTTAGCATTCT
TCGTGGATTGAAGGAGAAGTATGAGGGTCATCATGGTGTTCGGATTCAGG
ATCGTGCTCTTGTTGTTGCGGCACAACTATCAGCACGATATATAACAGGA
CGTCATCTCCCAGACAAGGCAATTGATTTGGTTGATGAAGCTTGCGCAAA
TGTGAGGGTNNAGCTTGATAGTCACCCAGAGGAAATTGATAATCTAGAGA
GGAAGAAAATGCCATTAAAGN
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