CB610803

Overview
NameCB610803
Unique NameCB610803
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_ECOL6 (Chaperone protein clpB OS=Escherichia coli O6 GN=clpB PE=3 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.127e-90
Identity = 160/239 (66.95%), Postives = 200/239 (83.68%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  +++L RRTKNNP LIGEPGVGKTA+VEGLAQRI+ G+VP  L   R++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+YE HH V+I D A+V AA LS RYI  R LPDKAIDL+DEA +++R+ +DS PEE+D L+R+ + LK
Sbjct:  185 EEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLK 423          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_ECO57 (Chaperone protein clpB OS=Escherichia coli O157:H7 GN=clpB PE=3 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.127e-90
Identity = 160/239 (66.95%), Postives = 200/239 (83.68%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  +++L RRTKNNP LIGEPGVGKTA+VEGLAQRI+ G+VP  L   R++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+YE HH V+I D A+V AA LS RYI  R LPDKAIDL+DEA +++R+ +DS PEE+D L+R+ + LK
Sbjct:  185 EEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLK 423          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB2_STRAW (Chaperone protein clpB 2 OS=Streptomyces avermitilis GN=clpB2 PE=3 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.127e-90
Identity = 166/233 (71.24%), Postives = 194/233 (83.26%), Query Frame = 1
Query:    7 EIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERK 705
            EIR   +ILSR+TKNNP LIG+PGVGKTA+VEGLAQRIVRGDVP  L D  + ALDMG+LVAGAKYRGEFEERLKAVL EV+ AEG+++LF+DE+H V+GAG  EG+MDA N+ KPMLARG+L  IGATTL+EYRK++EKDAA ERRFQQV V EPSV DT+SILRGL+E+ E  HGV+IQD ALV AA LS RYIT R LPDKAIDLVDEACA +R  +DS P E+D + R+
Sbjct:  191 EIRRVTQILSRKTKNNPVLIGDPGVGKTAIVEGLAQRIVRGDVPEGLRDKTVFALDMGSLVAGAKYRGEFEERLKAVLSEVKAAEGRILLFVDELHTVVGAGAAEGAMDAGNMLKPMLARGELHMIGATTLDEYRKHIEKDAALERRFQQVLVDEPSVEDTISILRGLRERLEVFHGVKIQDTALVSAATLSHRYITDRFLPDKAIDLVDEACARLRTEIDSMPAELDEITRR 423          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_THET8 (Chaperone protein clpB OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=clpB PE=1 SV=2)

HSP 1 Score: 332.413 bits (851), Expect = 1.472e-90
Identity = 166/239 (69.46%), Postives = 202/239 (84.52%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  ++IL RRTKNNP LIGEPGVGKTA+VEGLAQRIV+GDVP  L   R+++L MG+L+AGAKYRGEFEERLKAV++EV +++G+VILFIDE+H V+GAG+ EG++DA N+ KP LARG+LR IGATTL+EYR+ +EKD A ERRFQ VYV EP+V +T+SILRGLKEKYE HHGVRI D A++ AA LS RYIT R LPDKAIDL+DEA A +R+ L+S PEEID LERKK+ L+
Sbjct:  177 EEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQMGSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEGAVDAGNMLKPALARGELRLIGATTLDEYRE-IEKDPALERRFQPVYVDEPTVEETISILRGLKEKYEVHHGVRISDSAIIAAATLSHRYITERRLPDKAIDLIDEAAARLRMALESAPEEIDALERKKLQLE 414          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_THET2 (Chaperone protein clpB OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=clpB PE=3 SV=1)

HSP 1 Score: 332.413 bits (851), Expect = 1.472e-90
Identity = 166/239 (69.46%), Postives = 202/239 (84.52%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  ++IL RRTKNNP LIGEPGVGKTA+VEGLAQRIV+GDVP  L   R+++L MG+L+AGAKYRGEFEERLKAV++EV +++G+VILFIDE+H V+GAG+ EG++DA N+ KP LARG+LR IGATTL+EYR+ +EKD A ERRFQ VYV EP+V +T+SILRGLKEKYE HHGVRI D A++ AA LS RYIT R LPDKAIDL+DEA A +R+ L+S PEEID LERKK+ L+
Sbjct:  177 EEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQMGSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEGAVDAGNMLKPALARGELRLIGATTLDEYRE-IEKDPALERRFQPVYVDEPTVEETISILRGLKEKYEVHHGVRISDSAIIAAATLSHRYITERRLPDKAIDLIDEAAARLRMALESAPEEIDALERKKLQLE 414          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_RHILO (Chaperone protein clpB OS=Rhizobium loti GN=clpB PE=3 SV=1)

HSP 1 Score: 332.028 bits (850), Expect = 1.922e-90
Identity = 165/239 (69.04%), Postives = 196/239 (82.01%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            +EIR  +++LSRRTKNNP LIGEPGVGKTA+ EGLA RIV GDVP +L D +L+ALDMGAL+AGAKYRGEFEERLKAVL EV  A G +ILFIDE+H ++GAG+ +G+MDA+NL KP LARG+L C+GATTL+EYRK+VEKD A  RRFQ V+V EP+V DTVSILRGLKEKYE HH VRI D ALV AA LS RYI  R LPDKAIDLVDEA + +R+ +DS PE +D ++R+ M LK
Sbjct:  186 DEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDKQLMALDMGALIAGAKYRGEFEERLKAVLSEVTSANGNIILFIDEMHTLVGAGKADGAMDASNLLKPALARGELHCVGATTLDEYRKHVEKDPALARRFQPVFVDEPTVEDTVSILRGLKEKYEQHHKVRISDSALVAAATLSNRYIADRFLPDKAIDLVDEAASRLRMQVDSKPEALDEIDRRIMQLK 424          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_MYCTU (Chaperone protein clpB OS=Mycobacterium tuberculosis GN=clpB PE=3 SV=1)

HSP 1 Score: 332.028 bits (850), Expect = 1.922e-90
Identity = 163/233 (69.96%), Postives = 197/233 (84.55%), Query Frame = 1
Query:    7 EIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLER 702
            EIR  V++LSRRTKNNP LIGEPGVGKTA+VEGLAQRIV GDVP +L D  ++ALD+G++VAG+KYRGEFEERLKAVL +++ + G++I FIDE+H ++GAG T EG+MDA N+ KPMLARG+LR +GATTL+EYRK++EKDAA ERRFQQVYV EPSV DT+ ILRGLK++YE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+ +DS P EID +ER
Sbjct:  186 EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVALDLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMIKPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEVHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVER 418          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_MYCBO (Chaperone protein clpB OS=Mycobacterium bovis GN=clpB PE=3 SV=1)

HSP 1 Score: 332.028 bits (850), Expect = 1.922e-90
Identity = 163/233 (69.96%), Postives = 197/233 (84.55%), Query Frame = 1
Query:    7 EIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLER 702
            EIR  V++LSRRTKNNP LIGEPGVGKTA+VEGLAQRIV GDVP +L D  ++ALD+G++VAG+KYRGEFEERLKAVL +++ + G++I FIDE+H ++GAG T EG+MDA N+ KPMLARG+LR +GATTL+EYRK++EKDAA ERRFQQVYV EPSV DT+ ILRGLK++YE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+ +DS P EID +ER
Sbjct:  186 EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVALDLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMIKPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEVHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVER 418          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_CORGL (Chaperone protein clpB OS=Corynebacterium glutamicum GN=clpB PE=1 SV=1)

HSP 1 Score: 331.643 bits (849), Expect = 2.511e-90
Identity = 164/234 (70.09%), Postives = 197/234 (84.19%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLER 702
            +EIR  V++LSRRTKNNP LIGEPGVGKTA+VEGLA+RIV GDVP +L    LI+LD+G++VAGAKYRGEFEERLKAVL E++ A G+V+ FIDE+H ++GAG + E +MDA N+ KP+LARG+LR +GATTL EYRKY+EKDAA ERRFQQVYV EP+V D + ILRGLKE+YE HHGVRIQD ALV AA+LS RYIT R LPDKAIDLVDEA + +R+ +DS P+EID LER
Sbjct:  186 QEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLKGKTLISLDLGSMVAGAKYRGEFEERLKAVLDEIKGANGEVVTFIDELHTIVGAGASGESAMDAGNMIKPLLARGELRLVGATTLNEYRKYIEKDAALERRFQQVYVGEPTVEDAIGILRGLKERYEVHHGVRIQDSALVAAAELSNRYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELER 419          
BLAST of CB610803 vs. ExPASy Swiss-Prot
Match: CLPB_PHOLL (Chaperone protein clpB OS=Photorhabdus luminescens subsp. laumondii GN=clpB PE=3 SV=1)

HSP 1 Score: 331.257 bits (848), Expect = 3.279e-90
Identity = 160/239 (66.95%), Postives = 201/239 (84.10%), Query Frame = 1
Query:    4 EEIRTFVRILSRRTKNNPALIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVXLDSHPEEIDNLERKKMPLK 720
            EEIR  +++L RRTKNNP LIGEPGVGKTA+VEGLAQRI+ G+VP  L + R+++LDMGAL+AGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+VYVAEPSV DT++ILRGLKE+YE HH V+I D A+V AA LS RYI+ R LPDKAIDL+DEA A++R+ +DS PE +D LER+ + LK
Sbjct:  185 EEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALLAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRMLPDKAIDLIDEAGASLRMQMDSKPEALDRLERRVIQLK 423          
The following BLAST results are available for this feature:
BLAST of CB610803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
CLPB_ECOL61.127e-9066.95Chaperone protein clpB OS=Escherichia coli O6 GN=c... [more]
CLPB_ECO571.127e-9066.95Chaperone protein clpB OS=Escherichia coli O157:H7... [more]
CLPB2_STRAW1.127e-9071.24Chaperone protein clpB 2 OS=Streptomyces avermitil... [more]
CLPB_THET81.472e-9069.46Chaperone protein clpB OS=Thermus thermophilus (st... [more]
CLPB_THET21.472e-9069.46Chaperone protein clpB OS=Thermus thermophilus (st... [more]
CLPB_RHILO1.922e-9069.04Chaperone protein clpB OS=Rhizobium loti GN=clpB P... [more]
CLPB_MYCTU1.922e-9069.96Chaperone protein clpB OS=Mycobacterium tuberculos... [more]
CLPB_MYCBO1.922e-9069.96Chaperone protein clpB OS=Mycobacterium bovis GN=c... [more]
CLPB_CORGL2.511e-9070.09Chaperone protein clpB OS=Corynebacterium glutamic... [more]
CLPB_PHOLL3.279e-9066.95Chaperone protein clpB OS=Photorhabdus luminescens... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0002_IVaF_D06 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IVaF_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610803 ID=CB610803; Name=CB610803; organism=Citrus sinensis; type=EST; length=721bp
GGGGAAGAAATTAGAACGTTTGTTCGAATTCTGTCAAGGAGGACTAAAAA
CAATCCTGCTCTTATTGGAGAGCCAGGAGTTGGTAAAACCGCTGTGGTGG
AAGGATTGGCTCAGAGAATTGTGCGAGGAGATGTGCCTAGCAACCTTGCT
GATGTGAGGCTCATTGCTTTGGATATGGGTGCTCTGGTTGCAGGCGCCAA
GTATAGGGGAGAGTTTGAAGAGAGGTTGAAGGCTGTTCTGAAAGAAGTAG
AAGAAGCTGAGGGAAAAGTGATTTTGTTTATTGATGAGATTCACCTTGTC
CTTGGAGCTGGTCGAACCGAGGGATCAATGGATGCTGCTAACCTCTTTAA
GCCTATGCTTGCAAGAGGCCAGCTTAGATGTATTGGTGCTACCACGCTCG
AGGAGTATAGAAAGTATGTGGAGAAAGACGCTGCATTTGAGAGAAGGTTC
CAACAAGTATATGTGGCTGAACCTAGCGTTCCTGATACAGTTAGCATTCT
TCGTGGATTGAAGGAGAAGTATGAGGGTCATCATGGTGTTCGGATTCAGG
ATCGTGCTCTTGTTGTTGCGGCACAACTATCAGCACGATATATAACAGGA
CGTCATCTCCCAGACAAGGCAATTGATTTGGTTGATGAAGCTTGCGCAAA
TGTGAGGGTNNAGCTTGATAGTCACCCAGAGGAAATTGATAATCTAGAGA
GGAAGAAAATGCCATTAAAGN
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