CB610808
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB610808 vs. ExPASy Swiss-Prot
Match: RS3_PONAB (40S ribosomal protein S3 OS=Pongo abelii GN=RPS3 PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 6.422e-51 Identity = 104/121 (85.95%), Postives = 107/121 (88.43%), Query Frame = 2 Query: 119 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAERVNNRGLCAMIXAESLLYKLLGGLAGRRACYG 481 MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAE V RGLCA+ AESL YKLLGGLA RRACYG Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRACYG 121
BLAST of CB610808 vs. ExPASy Swiss-Prot
Match: RS32_XENLA (40S ribosomal protein S3-B OS=Xenopus laevis GN=rps3-B PE=2 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 2.440e-50 Identity = 102/121 (84.30%), Postives = 108/121 (89.26%), Query Frame = 2 Query: 119 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAERVNNRGLCAMIXAESLLYKLLGGLAGRRACYG 481 MA Q+SKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP +TEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAE+V RGLCA+ AESL YKLLGGLA RRACYG Sbjct: 1 MAAQMSKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTQTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYG 121
BLAST of CB610808 vs. ExPASy Swiss-Prot
Match: RS3_ICTPU (40S ribosomal protein S3 OS=Ictalurus punctatus GN=rps3 PE=2 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 3.187e-50 Identity = 102/121 (84.30%), Postives = 107/121 (88.43%), Query Frame = 2 Query: 119 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAERVNNRGLCAMIXAESLLYKLLGGLAGRRACYG 481 MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FP SVELYAE+V RGLCA+ AESL YKLLGGLA RRACYG Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPRGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYG 121
BLAST of CB610808 vs. ExPASy Swiss-Prot
Match: RS3_MANSE (40S ribosomal protein S3 OS=Manduca sexta GN=RpS3 PE=2 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 6.645e-48 Identity = 98/117 (83.76%), Postives = 103/117 (88.03%), Query Frame = 2 Query: 131 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAERVNNRGLCAMIXAESLLYKLLGGLAGRRACYG 481 ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP R+EIII ATRTQ+VLGEKGRRIRELTSVVQKRF PE SVELYAE+V RGLCA+ AESL YKL+GGLA RRACYG Sbjct: 6 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYG 122
BLAST of CB610808 vs. ExPASy Swiss-Prot
Match: RS3_SCHPO (40S ribosomal protein S3 OS=Schizosaccharomyces pombe GN=rps3 PE=1 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 3.646e-46 Identity = 94/120 (78.33%), Postives = 104/120 (86.67%), Query Frame = 2 Query: 122 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAERVNNRGLCAMIXAESLLYKLLGGLAGRRACYG 481 A ISKKRKFVADGVF+AELNE TREL+E+GYSG EVRVTP R+EIIIRAT TQ+VLGEKGRRIRELT++VQKRFKF EN+VELYAE+V NRGLCA+ ESL YKLL GLA RRA YG Sbjct: 4 AFTISKKRKFVADGVFYAELNEFFTRELSEEGYSGCEVRVTPSRSEIIIRATHTQDVLGEKGRRIRELTALVQKRFKFAENTVELYAEKVQNRGLCAVAQCESLRYKLLAGLAVRRAAYG 123
BLAST of CB610808 vs. ExPASy Swiss-Prot
Match: RS3_DROME (40S ribosomal protein S3 OS=Drosophila melanogaster GN=RpS3 PE=1 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 6.877e-45 Identity = 93/122 (76.23%), Postives = 101/122 (82.79%), Query Frame = 2 Query: 116 NMATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAERVNNRGLCAMIXAESLLYKLLGGLAGRRACYG 481 N ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLGEKGRRIRELT++VQKRF F +ELYAE+V RGLCA+ AESL YKL GGLA RRACYG Sbjct: 2 NANLPISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYG 123
BLAST of CB610808 vs. ExPASy Swiss-Prot
Match: RS3_CAEEL (40S ribosomal protein S3 OS=Caenorhabditis elegans GN=rps-3 PE=1 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.873e-42 Identity = 86/117 (73.50%), Postives = 98/117 (83.76%), Query Frame = 2 Query: 131 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAERVNNRGLCAMIXAESLLYKLLGGLAGRRACYG 481 ++KK+K V G+F AELN L +ELAEDGYSGVEVR TP R E+II ATRTQNVLGE+GRRI+ELTSVVQKRF F E SVELYAE+V+NRGLCA+ ESL YKL+GGLA RRACYG Sbjct: 7 VTKKKKAVIGGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGRRIKELTSVVQKRFGFEEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYG 123
BLAST of CB610808 vs. ExPASy Swiss-Prot
Match: RS3_YEAST (40S ribosomal protein S3 OS=Saccharomyces cerevisiae GN=RPS3 PE=1 SV=5) HSP 1 Score: 168.318 bits (425), Expect = 1.585e-41 Identity = 86/121 (71.07%), Postives = 99/121 (81.82%), Query Frame = 2 Query: 119 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAERVNNRGLCAMIXAESLLYKLLGGLAGRRACYG 481 M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLGE GRRI ELT +VQKRFK+ ++ LYAERV +RGL A+ AES+ +KLL GLA RRA YG Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLGENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYG 121
BLAST of CB610808 vs. ExPASy Swiss-Prot
Match: RS3_DICDI (40S ribosomal protein S3 OS=Dictyostelium discoideum GN=rps3 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.698e-35 Identity = 78/122 (63.93%), Postives = 95/122 (77.87%), Query Frame = 2 Query: 116 NMATQISKKRKFVADGVFFAELNEVLTRELAED-GYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAERVNNRGLCAMIXAESLLYKLLGGLAGRRACY 478 N + QISKKRKFVADGVF AELNE+ TRE +D GYSGVE++ +P TEIIIRA++TQ V+G RRI+EL S+VQKRF F E +V L+AE++ NRGLCA+ AESL KLL GL R+ACY Sbjct: 2 NSSLQISKKRKFVADGVFHAELNELFTREFNKDEGYSGVELKTSPGLTEIIIRASKTQAVVGPNARRIQELCSLVQKRFNFKEGTVVLFAEKILNRGLCAVAQAESLKLKLLAGLPVRKACY 123
BLAST of CB610808 vs. ExPASy Swiss-Prot
Match: RS3_ENCCU (40S ribosomal protein S3 OS=Encephalitozoon cuniculi GN=RPS3 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.549e-15 Identity = 38/109 (34.86%), Postives = 67/109 (61.47%), Query Frame = 2 Query: 146 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAERVNNRGLCAMIXAESLLYKLLGGLAGRRA 472 +F+ +G+ AEL E + L +G+S +E+R+ +II++ + +GEK R+R+ + +R + P+ SVE+ E+V+ +GLCA+I A + K+LGG+ RRA Sbjct: 21 RFMKNGLMNAELKEFFEKALVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKFRLRQFQHLAAQRLEVPDESVEIVVEKVHEKGLCALIQANFIREKILGGVQYRRA 129 The following BLAST results are available for this feature:
BLAST of CB610808 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB610808 ID=CB610808; Name=CB610808; organism=Citrus sinensis; type=EST; length=484bpback to top |