CB610808
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB610808 vs. ExPASy Swiss-Prot
Match: RS3_THEON (30S ribosomal protein S3P OS=Thermococcus onnurineus (strain NA1) GN=rps3p PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.184e-12 Identity = 41/113 (36.28%), Postives = 65/113 (57.52%), Query Frame = 2 Query: 140 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAERVNNRGLCAMIXAESLLYKLLGGLAGRRACY 478 +R F+ +GV ++E L +EL GY G++++ TP+ T++II A V+G GRRIRELT +++++F +E+ E + N L A + A L L G+ RRA Y Sbjct: 4 ERYFIKEGVREMLIDEYLEKELRRAGYGGIDIKKTPLGTKVIIFAANPGYVIGRGGRRIRELTRILERQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGVHFRRAAY 114
BLAST of CB610808 vs. ExPASy Swiss-Prot
Match: RS3_THEGJ (30S ribosomal protein S3P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rps3p PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.184e-12 Identity = 41/113 (36.28%), Postives = 65/113 (57.52%), Query Frame = 2 Query: 140 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAERVNNRGLCAMIXAESLLYKLLGGLAGRRACY 478 +R F+ +GV ++E L +EL GY G++++ TP+ T++II A V+G GRRIRELT +++++F +E+ E + N L A + A L L G+ RRA Y Sbjct: 4 ERYFIKEGVKEMLIDEYLEKELRRAGYGGIDIKKTPLGTKVIIFAASPGYVIGRGGRRIRELTRILERQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAY 114
BLAST of CB610808 vs. ExPASy Swiss-Prot
Match: RS3_PYRKO (30S ribosomal protein S3P OS=Pyrococcus kodakaraensis GN=rps3p PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.638e-12 Identity = 41/113 (36.28%), Postives = 64/113 (56.64%), Query Frame = 2 Query: 140 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAERVNNRGLCAMIXAESLLYKLLGGLAGRRACY 478 +R F+ +GV ++E L +EL GY G++++ TP+ T++ I A V+G GRRIRELT +++K+F +E+ E + N L A + A L L G+ RRA Y Sbjct: 4 ERYFIKEGVKEMLIDEFLEKELRRAGYGGLDIKKTPLGTKVTIFAANPGYVIGRGGRRIRELTRILEKQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAY 114
BLAST of CB610808 vs. ExPASy Swiss-Prot
Match: RS3_THESM (30S ribosomal protein S3P OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rps3p PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.445e-12 Identity = 38/113 (33.63%), Postives = 64/113 (56.64%), Query Frame = 2 Query: 140 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAERVNNRGLCAMIXAESLLYKLLGGLAGRRACY 478 +R F+ +G+ ++E L +EL GY G++++ TP+ T+++I R V+G GR+IRELT ++++RF +E+ E + N A + A L L G+ RRA Y Sbjct: 4 ERYFIKEGIKEMLIDEYLEKELRRAGYGGLDIKKTPLGTKVVIFVERPGFVIGRGGRKIRELTRILERRFNLENPQIEV--EEIKNSYFNAKVQATRLAQALERGVHFRRAAY 114
BLAST of CB610808 vs. ExPASy Swiss-Prot
Match: RS3_PYRFU (30S ribosomal protein S3P OS=Pyrococcus furiosus GN=rps3p PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.445e-12 Identity = 41/113 (36.28%), Postives = 64/113 (56.64%), Query Frame = 2 Query: 140 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAERVNNRGLCAMIXAESLLYKLLGGLAGRRACY 478 +R F+ + V ++E L +EL GY G++++ TP+ T++II A V+G GRRIRELT +++K+F +E+ E + N L A + A L L G+ RRA Y Sbjct: 4 ERYFIREAVREMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIRELTRILEKQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAY 114
BLAST of CB610808 vs. ExPASy Swiss-Prot
Match: RS3_PYRHO (30S ribosomal protein S3P OS=Pyrococcus horikoshii GN=rps3p PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.496e-11 Identity = 37/113 (32.74%), Postives = 64/113 (56.64%), Query Frame = 2 Query: 140 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAERVNNRGLCAMIXAESLLYKLLGGLAGRRACY 478 +R F+ + V ++E L +EL GY G++++ TP+ T++II A V+G GRRIRELT +++++F +++ + + N L A + A + L G+ RRA Y Sbjct: 4 ERYFIREAVKEMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIRELTRILERQFGLENPQIDV--QEIKNPYLNAKVQAVRIAQALERGIHFRRAAY 114
BLAST of CB610808 vs. ExPASy Swiss-Prot
Match: RS3_PYRAB (30S ribosomal protein S3P OS=Pyrococcus abyssi GN=rps3p PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.496e-11 Identity = 37/113 (32.74%), Postives = 64/113 (56.64%), Query Frame = 2 Query: 140 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAERVNNRGLCAMIXAESLLYKLLGGLAGRRACY 478 +R F+ + V ++E L +EL GY G++++ TP+ T++II A V+G GRRIRELT +++++F +++ + + N L A + A + L G+ RRA Y Sbjct: 4 ERYFIREAVKEMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIRELTRILERQFGLENPQIDV--QEIKNPYLNAKVQAVRIAQALERGIHFRRAAY 114 The following BLAST results are available for this feature:
BLAST of CB610808 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB610808 ID=CB610808; Name=CB610808; organism=Citrus sinensis; type=EST; length=484bpback to top |